RNA–Protein interactions for RNA: ENST00000561952.1

GINS3-204, Transcript of GINS complex subunit 3, humanhuman

TSL 2

Gene GINS3, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-204ENST00000561952 TPTE2Q6XPS3 522 aa10.81□□□□□ -0.68
GINS3-204ENST00000561952 CNKSR1Q969H4 720 aa10.81□□□□□ -0.68
GINS3-204ENST00000561952 ZNF428Q96B54 188 aa10.81□□□□□ -0.68
GINS3-204ENST00000561952 PRKRIP1Q9H875 184 aaPredicted RBP10.81□□□□□ -0.68
GINS3-204ENST00000561952 ADAMTS8Q9UP79 889 aa10.81□□□□□ -0.68
GINS3-204ENST00000561952 PDZRN3Q9UPQ7 1066 aa10.81□□□□□ -0.68
GINS3-204ENST00000561952 FARP1Q9Y4F1 1045 aaPredicted RBP10.81□□□□□ -0.68
GINS3-204ENST00000561952 ANKRD36CQ5JPF3 1778 aa10.8□□□□□ -0.68
GINS3-204ENST00000561952 POTEIP0CG38 1075 aa10.8□□□□□ -0.68
GINS3-204ENST00000561952 AIMP1Q12904 312 aaKnown RBP10.8□□□□□ -0.68
GINS3-204ENST00000561952 ERFEQ4G0M1 354 aa10.8□□□□□ -0.68
GINS3-204ENST00000561952 RUNDC1Q96C34 613 aa10.8□□□□□ -0.68
GINS3-204ENST00000561952 TAOK3Q9H2K8 898 aa10.8□□□□□ -0.68
GINS3-204ENST00000561952 WDR90Q96KV7 1748 aa10.8□□□□□ -0.68
GINS3-204ENST00000561952 UBN2Q6ZU65 1347 aa10.8□□□□□ -0.68
GINS3-204ENST00000561952 NPR1P16066 1061 aa10.79□□□□□ -0.68
GINS3-204ENST00000561952 ERVV-1B6SEH8 477 aa10.78□□□□□ -0.68
GINS3-204ENST00000561952 TCERG1O14776 1098 aaKnown RBP10.78□□□□□ -0.68
GINS3-204ENST00000561952 HTRA3P83110 453 aa10.78□□□□□ -0.68
GINS3-204ENST00000561952 SUSD4Q5VX71 490 aa10.78□□□□□ -0.68
GINS3-204ENST00000561952 NYXQ9GZU5 481 aa10.78□□□□□ -0.68
GINS3-204ENST00000561952 TRIM35Q9UPQ4 493 aa10.78□□□□□ -0.68
GINS3-204ENST00000561952 GLTPD2A6NH11 291 aa10.77□□□□□ -0.69
GINS3-204ENST00000561952 CCDC93Q567U6 631 aa10.77□□□□□ -0.69
GINS3-204ENST00000561952 SLC51AQ86UW1 340 aa10.77□□□□□ -0.69
GINS3-204ENST00000561952 RBM46Q8TBY0 533 aaKnown RBP10.77□□□□□ -0.69
GINS3-204ENST00000561952 XAGE3Q8WTP9 111 aa10.77□□□□□ -0.69
GINS3-204ENST00000561952 RPGRQ92834 1020 aaKnown RBP10.77□□□□□ -0.69
GINS3-204ENST00000561952 ZNF277Q9NRM2 450 aaPredicted RBP10.77□□□□□ -0.69
GINS3-204ENST00000561952 ERBB4Q15303 1308 aa10.77□□□□□ -0.69
GINS3-204ENST00000561952 ZC3H4Q9UPT8 1303 aaKnown RBP10.77□□□□□ -0.69
GINS3-204ENST00000561952 LAMB2P55268 1798 aa10.77□□□□□ -0.69
GINS3-204ENST00000561952 APAF1O14727 1248 aa10.76□□□□□ -0.69
GINS3-204ENST00000561952 PDIA6Q15084 440 aa10.76□□□□□ -0.69
GINS3-204ENST00000561952 SOGA3Q5TF21 947 aa10.76□□□□□ -0.69
GINS3-204ENST00000561952 GIGYF2Q6Y7W6 1299 aaKnown RBP10.76□□□□□ -0.69
GINS3-204ENST00000561952 COPS6Q7L5N1 327 aa10.76□□□□□ -0.69
GINS3-204ENST00000561952 CHPF2Q9P2E5 772 aa10.76□□□□□ -0.69
GINS3-204ENST00000561952 RGL2O15211 777 aa10.75□□□□□ -0.69
GINS3-204ENST00000561952 DDNO94850 711 aaPredicted RBP10.75□□□□□ -0.69
GINS3-204ENST00000561952 NTSR2O95665 410 aa10.75□□□□□ -0.69
GINS3-204ENST00000561952 VEGFAP15692 232 aaPredicted RBP10.75□□□□□ -0.69
GINS3-204ENST00000561952 APLP1P51693 650 aa10.75□□□□□ -0.69
GINS3-204ENST00000561952 HDGFL1Q5TGJ6 251 aa10.75□□□□□ -0.69
GINS3-204ENST00000561952 DPY19L2Q6NUT2 758 aa10.75□□□□□ -0.69
GINS3-204ENST00000561952 C3orf67Q6ZVT6 689 aa10.75□□□□□ -0.69
GINS3-204ENST00000561952 LRP10Q7Z4F1 713 aa10.75□□□□□ -0.69
GINS3-204ENST00000561952 ZNF34Q8IZ26 560 aa10.75□□□□□ -0.69
GINS3-204ENST00000561952 DCBLD2Q96PD2 775 aa10.75□□□□□ -0.69
GINS3-204ENST00000561952 BABAM1Q9NWV8 329 aa10.75□□□□□ -0.69
GINS3-204ENST00000561952 LTBP3Q9NS15 1303 aa10.75□□□□□ -0.69
GINS3-204ENST00000561952 TAF1P21675 1872 aa10.74□□□□□ -0.69
GINS3-204ENST00000561952 KLRG2A4D1S0 409 aaPredicted RBP10.74□□□□□ -0.69
GINS3-204ENST00000561952 CHL1O00533 1208 aa10.74□□□□□ -0.69
GINS3-204ENST00000561952 ALDH1B1P30837 517 aa10.74□□□□□ -0.69
GINS3-204ENST00000561952 FKBP4Q02790 459 aaKnown RBP eCLIP10.74□□□□□ -0.69
GINS3-204ENST00000561952 CCDC184Q52MB2 194 aa10.74□□□□□ -0.69
GINS3-204ENST00000561952 PPP1R42Q7Z4L9 355 aa10.74□□□□□ -0.69
GINS3-204ENST00000561952 SMC1BQ8NDV3 1235 aa10.74□□□□□ -0.69
GINS3-204ENST00000561952 C7orf43Q8WVR3 580 aa10.74□□□□□ -0.69
GINS3-204ENST00000561952 IBTKQ9P2D0 1353 aaPredicted RBP10.74□□□□□ -0.69
GINS3-204ENST00000561952 ELL2O00472 640 aaPredicted RBP10.73□□□□□ -0.69
GINS3-204ENST00000561952 PPEF1O14829 653 aaPredicted RBP10.73□□□□□ -0.69
GINS3-204ENST00000561952 FSTL1Q12841 308 aa10.73□□□□□ -0.69
GINS3-204ENST00000561952 DUSP27Q5VZP5 1158 aa10.73□□□□□ -0.69
GINS3-204ENST00000561952 SYNE4Q8N205 404 aa10.73□□□□□ -0.69
GINS3-204ENST00000561952 RBM17Q96I25 401 aaKnown RBP10.73□□□□□ -0.69
GINS3-204ENST00000561952 UTP14AQ9BVJ6 771 aaKnown RBP10.73□□□□□ -0.69
GINS3-204ENST00000561952 DDX21Q9NR30 783 aaKnown RBP eCLIP10.73□□□□□ -0.69
GINS3-204ENST00000561952 MBIPQ9NS73 344 aa10.73□□□□□ -0.69
GINS3-204ENST00000561952 ZNF541Q9H0D2 1346 aa10.73□□□□□ -0.69
GINS3-204ENST00000561952 PCNTO95613 3336 aa10.73□□□□□ -0.69
GINS3-204ENST00000561952 POTECB2RU33 542 aa10.72□□□□□ -0.69
GINS3-204ENST00000561952 POTEJP0CG39 1038 aa10.72□□□□□ -0.69
GINS3-204ENST00000561952 HCLS1P14317 486 aaPredicted RBP10.72□□□□□ -0.69
GINS3-204ENST00000561952 IARSP41252 1262 aaKnown RBP10.72□□□□□ -0.69
GINS3-204ENST00000561952 CRY2Q49AN0 593 aa10.72□□□□□ -0.69
GINS3-204ENST00000561952 PARP10Q53GL7 1025 aa10.72□□□□□ -0.69
GINS3-204ENST00000561952 RTKN2Q8IZC4 609 aa10.72□□□□□ -0.69
GINS3-204ENST00000561952 CFAP44Q96MT7 982 aa10.72□□□□□ -0.69
GINS3-204ENST00000561952 DDX60Q8IY21 1712 aaKnown RBP10.72□□□□□ -0.69
GINS3-204ENST00000561952 ATP5J2-PTCD1G3V325 749 aa10.71□□□□□ -0.69
GINS3-204ENST00000561952 COL4A5P29400 1685 aa10.71□□□□□ -0.69
GINS3-204ENST00000561952 RIC1Q4ADV7 1423 aa10.71□□□□□ -0.69
GINS3-204ENST00000561952 HSP90AB3PQ58FF7 597 aa10.71□□□□□ -0.69
GINS3-204ENST00000561952 RTL5Q5HYW3 569 aaPredicted RBP10.71□□□□□ -0.69
GINS3-204ENST00000561952 NLRP10Q86W26 655 aa10.71□□□□□ -0.69
GINS3-204ENST00000561952 NLRP3Q96P20 1036 aa10.71□□□□□ -0.69
GINS3-204ENST00000561952 TRMT112Q9UI30 125 aaKnown RBP10.71□□□□□ -0.69
GINS3-204ENST00000561952 SCN4AP35499 1836 aa10.7□□□□□ -0.7
GINS3-204ENST00000561952 ABCC4O15439 1325 aa10.7□□□□□ -0.7
GINS3-204ENST00000561952 ZEB1P37275 1124 aaPredicted RBP10.7□□□□□ -0.7
GINS3-204ENST00000561952 TCIRG1Q13488 830 aa10.7□□□□□ -0.7
GINS3-204ENST00000561952 EAPPQ56P03 285 aaPredicted RBP10.7□□□□□ -0.7
GINS3-204ENST00000561952 GJA3Q9Y6H8 435 aa10.7□□□□□ -0.7
GINS3-204ENST00000561952 SNED1Q8TER0 1413 aa10.69□□□□□ -0.7
GINS3-204ENST00000561952 RNF123Q5XPI4 1314 aa10.69□□□□□ -0.7
GINS3-204ENST00000561952 HOXA10P31260 410 aaPredicted RBP10.69□□□□□ -0.7
GINS3-204ENST00000561952 GNAI1P63096 354 aa10.69□□□□□ -0.7
GINS3-204ENST00000561952 ANKRD13DQ6ZTN6 518 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms