RNA–Protein interactions for RNA: ENST00000561914.5

BBS4-203, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 5

Gene BBS4, Length 777 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-203ENST00000561914 BCL2L12Q9HB09 334 aa9.43□□□□□ -0.9
BBS4-203ENST00000561914 POLKQ9UBT6 870 aa9.43□□□□□ -0.9
BBS4-203ENST00000561914 PDZRN3Q9UPQ7 1066 aa9.43□□□□□ -0.9
BBS4-203ENST00000561914 TNRC18O15417 2968 aaPredicted RBP9.43□□□□□ -0.9
BBS4-203ENST00000561914 LTBP3Q9NS15 1303 aa9.42□□□□□ -0.9
BBS4-203ENST00000561914 TNNT2P45379 298 aaPredicted RBP9.42□□□□□ -0.9
BBS4-203ENST00000561914 MAP1SQ66K74 1059 aaPredicted RBP9.42□□□□□ -0.9
BBS4-203ENST00000561914 CCDC24Q8N4L8 307 aa9.42□□□□□ -0.9
BBS4-203ENST00000561914 BRIP1Q9BX63 1249 aa9.42□□□□□ -0.9
BBS4-203ENST00000561914 HACL1Q9UJ83 578 aa9.42□□□□□ -0.9
BBS4-203ENST00000561914 CARMIL3Q8ND23 1372 aa9.41□□□□□ -0.9
BBS4-203ENST00000561914 CYP19A1P11511 503 aaPredicted RBP9.41□□□□□ -0.9
BBS4-203ENST00000561914 EPHX2P34913 555 aa9.41□□□□□ -0.9
BBS4-203ENST00000561914 CAMK2BQ13554 666 aa9.41□□□□□ -0.9
BBS4-203ENST00000561914 PNMA8AQ86V59 439 aaPredicted RBP9.41□□□□□ -0.9
BBS4-203ENST00000561914 GPR101Q96P66 508 aaPredicted RBP9.41□□□□□ -0.9
BBS4-203ENST00000561914 TSKSQ9UJT2 592 aa9.41□□□□□ -0.9
BBS4-203ENST00000561914 SNPHO15079 494 aa9.4□□□□□ -0.9
BBS4-203ENST00000561914 NPHP1O15259 732 aa9.4□□□□□ -0.9
BBS4-203ENST00000561914 CANXP27824 592 aaKnown RBP9.4□□□□□ -0.9
BBS4-203ENST00000561914 ECE1P42892 770 aa9.4□□□□□ -0.9
BBS4-203ENST00000561914 CDCA8Q53HL2 280 aa9.4□□□□□ -0.9
BBS4-203ENST00000561914 SOGA3Q5TF21 947 aa9.4□□□□□ -0.9
BBS4-203ENST00000561914 CNKSR1Q969H4 720 aa9.4□□□□□ -0.9
BBS4-203ENST00000561914 CAPNS2Q96L46 248 aa9.4□□□□□ -0.9
BBS4-203ENST00000561914 MCOLN1Q9GZU1 580 aa9.4□□□□□ -0.9
BBS4-203ENST00000561914 ZBTB1Q9Y2K1 713 aa9.4□□□□□ -0.9
BBS4-203ENST00000561914 ZNF831Q5JPB2 1677 aa9.39□□□□□ -0.91
BBS4-203ENST00000561914 DOK7Q18PE1 504 aa9.39□□□□□ -0.91
BBS4-203ENST00000561914 CYP4F22Q6NT55 531 aa9.39□□□□□ -0.91
BBS4-203ENST00000561914 PRPF40BQ6NWY9 871 aaKnown RBP9.39□□□□□ -0.91
BBS4-203ENST00000561914 DDX21Q9NR30 783 aaKnown RBP eCLIP9.39□□□□□ -0.91
BBS4-203ENST00000561914 COL5A3P25940 1745 aaPredicted RBP9.39□□□□□ -0.91
BBS4-203ENST00000561914 TIAM2Q8IVF5 1701 aa9.39□□□□□ -0.91
BBS4-203ENST00000561914 COL15A1P39059 1388 aa9.38□□□□□ -0.91
BBS4-203ENST00000561914 HOXB3P14651 431 aaPredicted RBP9.38□□□□□ -0.91
BBS4-203ENST00000561914 SLC39A6Q13433 755 aa9.38□□□□□ -0.91
BBS4-203ENST00000561914 TBC1D9BQ66K14 1250 aa9.38□□□□□ -0.91
BBS4-203ENST00000561914 STYK1Q6J9G0 422 aa9.38□□□□□ -0.91
BBS4-203ENST00000561914 PRR5LQ6MZQ0 368 aa9.38□□□□□ -0.91
BBS4-203ENST00000561914 KCNV2Q8TDN2 545 aa9.38□□□□□ -0.91
BBS4-203ENST00000561914 ZNF277Q9NRM2 450 aaPredicted RBP9.38□□□□□ -0.91
BBS4-203ENST00000561914 CCDC88AQ3V6T2 1871 aa9.38□□□□□ -0.91
BBS4-203ENST00000561914 RNF123Q5XPI4 1314 aa9.37□□□□□ -0.91
BBS4-203ENST00000561914 ZNF541Q9H0D2 1346 aa9.37□□□□□ -0.91
BBS4-203ENST00000561914 A0A087WZG4 1122 aa9.37□□□□□ -0.91
BBS4-203ENST00000561914 SRGNP10124 158 aa9.37□□□□□ -0.91
BBS4-203ENST00000561914 DGKZQ13574 1117 aa9.37□□□□□ -0.91
BBS4-203ENST00000561914 MASTLQ96GX5 879 aa9.37□□□□□ -0.91
BBS4-203ENST00000561914 EMILIN3Q9NT22 766 aa9.37□□□□□ -0.91
BBS4-203ENST00000561914 ZNF330Q9Y3S2 320 aaPredicted RBP9.37□□□□□ -0.91
BBS4-203ENST00000561914 CA12O43570 354 aa9.36□□□□□ -0.91
BBS4-203ENST00000561914 AOC2O75106 756 aa9.36□□□□□ -0.91
BBS4-203ENST00000561914 STARD3NLO95772 234 aa9.36□□□□□ -0.91
BBS4-203ENST00000561914 MAP2K2P36507 400 aa9.36□□□□□ -0.91
BBS4-203ENST00000561914 ST5P78524 1137 aa9.36□□□□□ -0.91
BBS4-203ENST00000561914 FMR1Q06787 632 aaKnown RBP eCLIP9.36□□□□□ -0.91
BBS4-203ENST00000561914 CCDC93Q567U6 631 aa9.36□□□□□ -0.91
BBS4-203ENST00000561914 AEBP1Q8IUX7 1158 aa9.36□□□□□ -0.91
BBS4-203ENST00000561914 CNBD1Q8NA66 436 aa9.36□□□□□ -0.91
BBS4-203ENST00000561914 SETDB2Q96T68 719 aa9.36□□□□□ -0.91
BBS4-203ENST00000561914 SLC52A2Q9HAB3 445 aa9.36□□□□□ -0.91
BBS4-203ENST00000561914 RIMBP2O15034 1052 aa9.35□□□□□ -0.91
BBS4-203ENST00000561914 EIF5P55010 431 aaKnown RBP9.35□□□□□ -0.91
BBS4-203ENST00000561914 FKBP4Q02790 459 aaKnown RBP eCLIP9.35□□□□□ -0.91
BBS4-203ENST00000561914 SULT6B1Q6IMI4 303 aa9.35□□□□□ -0.91
BBS4-203ENST00000561914 NPM2Q86SE8 214 aaKnown RBP9.35□□□□□ -0.91
BBS4-203ENST00000561914 GPC2Q8N158 579 aa9.35□□□□□ -0.91
BBS4-203ENST00000561914 OXER1Q8TDS5 423 aa9.35□□□□□ -0.91
BBS4-203ENST00000561914 C7orf43Q8WVR3 580 aa9.35□□□□□ -0.91
BBS4-203ENST00000561914 LGR6Q9HBX8 967 aa9.35□□□□□ -0.91
BBS4-203ENST00000561914 TBC1D2BQ9UPU7 963 aa9.35□□□□□ -0.91
BBS4-203ENST00000561914 GJA3Q9Y6H8 435 aa9.35□□□□□ -0.91
BBS4-203ENST00000561914 AFDNP55196 1824 aaKnown RBP9.34□□□□□ -0.91
BBS4-203ENST00000561914 VIRMAQ69YN4 1812 aaKnown RBP9.34□□□□□ -0.91
BBS4-203ENST00000561914 TRAF5O00463 557 aa9.34□□□□□ -0.91
BBS4-203ENST00000561914 LMOD1P29536 600 aaPredicted RBP9.34□□□□□ -0.91
BBS4-203ENST00000561914 AKAP4Q5JQC9 854 aa9.34□□□□□ -0.91
BBS4-203ENST00000561914 CST9Q5W186 159 aa9.34□□□□□ -0.91
BBS4-203ENST00000561914 RTKN2Q8IZC4 609 aa9.34□□□□□ -0.91
BBS4-203ENST00000561914 ZNF710Q8N1W2 664 aa9.34□□□□□ -0.91
BBS4-203ENST00000561914 PTCD2Q8WV60 388 aaKnown RBP9.34□□□□□ -0.91
BBS4-203ENST00000561914 FZD9O00144 591 aa9.33□□□□□ -0.92
BBS4-203ENST00000561914 TBC1D12O60347 775 aa9.33□□□□□ -0.92
BBS4-203ENST00000561914 NPR1P16066 1061 aa9.33□□□□□ -0.92
BBS4-203ENST00000561914 SOX10P56693 466 aa9.33□□□□□ -0.92
BBS4-203ENST00000561914 PRPF38BQ5VTL8 546 aaKnown RBP9.33□□□□□ -0.92
BBS4-203ENST00000561914 OLFM4Q6UX06 510 aa9.33□□□□□ -0.92
BBS4-203ENST00000561914 JDP2Q8WYK2 163 aa9.33□□□□□ -0.92
BBS4-203ENST00000561914 ARIH1Q9Y4X5 557 aaPredicted RBP9.33□□□□□ -0.92
BBS4-203ENST00000561914 TLL2Q9Y6L7 1015 aa9.33□□□□□ -0.92
BBS4-203ENST00000561914 ADAMTS7Q9UKP4 1686 aa9.32□□□□□ -0.92
BBS4-203ENST00000561914 NRXN2Q9P2S2 1712 aa9.32□□□□□ -0.92
BBS4-203ENST00000561914 DPYSL4O14531 572 aa9.32□□□□□ -0.92
BBS4-203ENST00000561914 IARSP41252 1262 aaKnown RBP9.32□□□□□ -0.92
BBS4-203ENST00000561914 EIF6P56537 245 aaKnown RBP9.32□□□□□ -0.92
BBS4-203ENST00000561914 MAP3K9P80192 1104 aa9.32□□□□□ -0.92
BBS4-203ENST00000561914 SYNE4Q8N205 404 aa9.32□□□□□ -0.92
BBS4-203ENST00000561914 ZSWIM6Q9HCJ5 1215 aa9.32□□□□□ -0.92
BBS4-203ENST00000561914 PCDHGA4Q9Y5G9 962 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms