RNA–Protein interactions for RNA: ENST00000561896.1

MSLN-203, Transcript of mesothelin, humanhuman

TSL 5

Gene MSLN, Length 1,195 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-203ENST00000561896 CHPF2Q9P2E5 772 aa33.04■■■□□ 2.88
MSLN-203ENST00000561896 ZNF219Q9P2Y4 722 aaPredicted RBP33.04■■■□□ 2.88
MSLN-203ENST00000561896 TOMM70O94826 608 aa33.02■■■□□ 2.88
MSLN-203ENST00000561896 MRS2Q9HD23 443 aa33.02■■■□□ 2.88
MSLN-203ENST00000561896 HOXA10P31260 410 aaPredicted RBP33.01■■■□□ 2.87
MSLN-203ENST00000561896 AIMP1Q12904 312 aaKnown RBP33.01■■■□□ 2.87
MSLN-203ENST00000561896 CCDC93Q567U6 631 aa33.01■■■□□ 2.87
MSLN-203ENST00000561896 HYPKQ9NX55 129 aa33.01■■■□□ 2.87
MSLN-203ENST00000561896 TCIRG1Q13488 830 aa33■■■□□ 2.87
MSLN-203ENST00000561896 UTP14AQ9BVJ6 771 aaKnown RBP33■■■□□ 2.87
MSLN-203ENST00000561896 GLTPD2A6NH11 291 aa32.99■■■□□ 2.87
MSLN-203ENST00000561896 SLC10A5Q5PT55 438 aa32.99■■■□□ 2.87
MSLN-203ENST00000561896 CHMP4AQ9BY43 222 aa32.99■■■□□ 2.87
MSLN-203ENST00000561896 PLBD2Q8NHP8 589 aa32.98■■■□□ 2.87
MSLN-203ENST00000561896 RTKN2Q8IZC4 609 aa32.97■■■□□ 2.87
MSLN-203ENST00000561896 RPGRQ92834 1020 aaKnown RBP32.97■■■□□ 2.87
MSLN-203ENST00000561896 ANKRD13DQ6ZTN6 518 aa32.96■■■□□ 2.87
MSLN-203ENST00000561896 NLRP10Q86W26 655 aa32.96■■■□□ 2.87
MSLN-203ENST00000561896 CC2D2BQ6DHV5 1058 aa32.95■■■□□ 2.87
MSLN-203ENST00000561896 NLRP3Q96P20 1036 aa32.95■■■□□ 2.87
MSLN-203ENST00000561896 CRAMP1Q96RY5 1269 aa32.95■■■□□ 2.87
MSLN-203ENST00000561896 CEP350Q5VT06 3117 aa32.95■■■□□ 2.86
MSLN-203ENST00000561896 HSPA6P17066 643 aa32.94■■■□□ 2.86
MSLN-203ENST00000561896 RBM46Q8TBY0 533 aaKnown RBP32.94■■■□□ 2.86
MSLN-203ENST00000561896 FKBP4Q02790 459 aaKnown RBP eCLIP32.93■■■□□ 2.86
MSLN-203ENST00000561896 GRIPAP1Q4V328 841 aa32.93■■■□□ 2.86
MSLN-203ENST00000561896 DPY19L2Q6NUT2 758 aa32.93■■■□□ 2.86
MSLN-203ENST00000561896 WWC1Q8IX03 1113 aa32.93■■■□□ 2.86
MSLN-203ENST00000561896 C16orf71Q8IYS4 520 aaPredicted RBP32.93■■■□□ 2.86
MSLN-203ENST00000561896 RBM17Q96I25 401 aaKnown RBP32.93■■■□□ 2.86
MSLN-203ENST00000561896 RRAGCQ9HB90 399 aa32.93■■■□□ 2.86
MSLN-203ENST00000561896 IL16Q14005 1332 aa32.91■■■□□ 2.86
MSLN-203ENST00000561896 C8orf58Q8NAV2 365 aa32.9■■■□□ 2.86
MSLN-203ENST00000561896 SNED1Q8TER0 1413 aa32.9■■■□□ 2.86
MSLN-203ENST00000561896 WDR90Q96KV7 1748 aa32.9■■■□□ 2.86
MSLN-203ENST00000561896 SH3TC1Q8TE82 1336 aa32.89■■■□□ 2.86
MSLN-203ENST00000561896 VEGFAP15692 232 aaPredicted RBP32.89■■■□□ 2.86
MSLN-203ENST00000561896 ISCA1Q9BUE6 129 aa32.89■■■□□ 2.86
MSLN-203ENST00000561896 TRMT112Q9UI30 125 aaKnown RBP32.89■■■□□ 2.86
MSLN-203ENST00000561896 PSMD1Q99460 953 aa32.88■■■□□ 2.85
MSLN-203ENST00000561896 ELL2O00472 640 aaPredicted RBP32.87■■■□□ 2.85
MSLN-203ENST00000561896 TRIM28Q13263 835 aaKnown RBP32.87■■■□□ 2.85
MSLN-203ENST00000561896 CCDC30Q5VVM6 783 aa32.87■■■□□ 2.85
MSLN-203ENST00000561896 C3orf67Q6ZVT6 689 aa32.87■■■□□ 2.85
MSLN-203ENST00000561896 LAMB2P55268 1798 aa32.87■■■□□ 2.85
MSLN-203ENST00000561896 FSTL1Q12841 308 aa32.86■■■□□ 2.85
MSLN-203ENST00000561896 OLFM4Q6UX06 510 aa32.86■■■□□ 2.85
MSLN-203ENST00000561896 GOLGA2Q08379 1002 aa32.84■■■□□ 2.85
MSLN-203ENST00000561896 PPEF1O14829 653 aaPredicted RBP32.83■■■□□ 2.85
MSLN-203ENST00000561896 SYNE4Q8N205 404 aa32.82■■■□□ 2.84
MSLN-203ENST00000561896 TSR2Q969E8 191 aaKnown RBP32.82■■■□□ 2.84
MSLN-203ENST00000561896 ZNF277Q9NRM2 450 aaPredicted RBP32.82■■■□□ 2.84
MSLN-203ENST00000561896 IARSP41252 1262 aaKnown RBP32.81■■■□□ 2.84
MSLN-203ENST00000561896 RIC3Q7Z5B4 369 aa32.81■■■□□ 2.84
MSLN-203ENST00000561896 WDR63Q8IWG1 891 aa32.81■■■□□ 2.84
MSLN-203ENST00000561896 TSPYL6Q8N831 410 aa32.81■■■□□ 2.84
MSLN-203ENST00000561896 PHAXQ9H814 394 aaKnown RBP32.81■■■□□ 2.84
MSLN-203ENST00000561896 POTECB2RU33 542 aa32.8■■■□□ 2.84
MSLN-203ENST00000561896 BBOX1O75936 387 aa32.8■■■□□ 2.84
MSLN-203ENST00000561896 HCLS1P14317 486 aaPredicted RBP32.8■■■□□ 2.84
MSLN-203ENST00000561896 DDX60Q8IY21 1712 aaKnown RBP32.8■■■□□ 2.84
MSLN-203ENST00000561896 ABCC4O15439 1325 aa32.79■■■□□ 2.84
MSLN-203ENST00000561896 APLP1P51693 650 aa32.79■■■□□ 2.84
MSLN-203ENST00000561896 TMX4Q9H1E5 349 aaPredicted RBP32.79■■■□□ 2.84
MSLN-203ENST00000561896 ATP6V0A2Q9Y487 856 aa32.79■■■□□ 2.84
MSLN-203ENST00000561896 ATP5J2-PTCD1G3V325 749 aa32.78■■■□□ 2.84
MSLN-203ENST00000561896 DDX58O95786 925 aaKnown RBP32.78■■■□□ 2.84
MSLN-203ENST00000561896 SMC1BQ8NDV3 1235 aa32.78■■■□□ 2.84
MSLN-203ENST00000561896 CACNA1FO60840 1977 aa32.77■■■□□ 2.84
MSLN-203ENST00000561896 DDX46Q7L014 1031 aaKnown RBP32.76■■■□□ 2.83
MSLN-203ENST00000561896 L3MBTL3Q96JM7 780 aaPredicted RBP32.76■■■□□ 2.83
MSLN-203ENST00000561896 SCN4AP35499 1836 aa32.76■■■□□ 2.83
MSLN-203ENST00000561896 FZD9O00144 591 aa32.75■■■□□ 2.83
MSLN-203ENST00000561896 DDNO94850 711 aaPredicted RBP32.75■■■□□ 2.83
MSLN-203ENST00000561896 TWISTNBQ3B726 338 aaPredicted RBP32.75■■■□□ 2.83
MSLN-203ENST00000561896 FAM89AQ96GI7 184 aa32.75■■■□□ 2.83
MSLN-203ENST00000561896 STK31Q9BXU1 1019 aa32.75■■■□□ 2.83
MSLN-203ENST00000561896 SF3B3Q15393 1217 aaKnown RBP32.74■■■□□ 2.83
MSLN-203ENST00000561896 TMC4Q7Z404 712 aa32.74■■■□□ 2.83
MSLN-203ENST00000561896 VPS33BQ9H267 617 aa32.74■■■□□ 2.83
MSLN-203ENST00000561896 HSP90B1P14625 803 aaKnown RBP32.73■■■□□ 2.83
MSLN-203ENST00000561896 GRAPQ13588 217 aa32.73■■■□□ 2.83
MSLN-203ENST00000561896 SP8Q8IXZ3 490 aa32.73■■■□□ 2.83
MSLN-203ENST00000561896 CCDC191Q8NCU4 936 aa32.73■■■□□ 2.83
MSLN-203ENST00000561896 GRAPLQ8TC17 118 aaPredicted RBP32.73■■■□□ 2.83
MSLN-203ENST00000561896 JDP2Q8WYK2 163 aa32.73■■■□□ 2.83
MSLN-203ENST00000561896 IQCA1LA6NCM1 817 aa32.72■■■□□ 2.83
MSLN-203ENST00000561896 ZBTB38Q8NAP3 1195 aaPredicted RBP32.72■■■□□ 2.83
MSLN-203ENST00000561896 METTL22Q9BUU2 404 aaPredicted RBP32.72■■■□□ 2.83
MSLN-203ENST00000561896 FANCIQ9NVI1 1328 aa32.72■■■□□ 2.83
MSLN-203ENST00000561896 KSR2Q6VAB6 950 aa32.7■■■□□ 2.83
MSLN-203ENST00000561896 FAM9BQ8IZU0 186 aa32.7■■■□□ 2.83
MSLN-203ENST00000561896 MYD88Q99836 296 aa32.7■■■□□ 2.83
MSLN-203ENST00000561896 RTFDC1Q9BY42 306 aaPredicted RBP32.7■■■□□ 2.83
MSLN-203ENST00000561896 IRS4O14654 1257 aaPredicted RBP32.69■■■□□ 2.82
MSLN-203ENST00000561896 TCERG1O14776 1098 aaKnown RBP32.69■■■□□ 2.82
MSLN-203ENST00000561896 SUPT20HQ8NEM7 779 aa32.69■■■□□ 2.82
MSLN-203ENST00000561896 ZNF541Q9H0D2 1346 aa32.69■■■□□ 2.82
MSLN-203ENST00000561896 TAF1P21675 1872 aa32.69■■■□□ 2.82
MSLN-203ENST00000561896 GPC2Q8N158 579 aa32.67■■■□□ 2.82
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms