RNA–Protein interactions for RNA: ENST00000561751.1

CDH1-203, Transcript of cadherin 1, humanhuman

TSL 4

Gene CDH1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-203ENST00000561751 SUGP1Q8IWZ8 645 aaKnown RBP8.67□□□□□ -1.02
CDH1-203ENST00000561751 IL17RAQ96F46 866 aa8.67□□□□□ -1.02
CDH1-203ENST00000561751 MED4Q9NPJ6 270 aa8.67□□□□□ -1.02
CDH1-203ENST00000561751 DONSONQ9NYP3 566 aa8.67□□□□□ -1.02
CDH1-203ENST00000561751 MYOM2P54296 1465 aa8.66□□□□□ -1.02
CDH1-203ENST00000561751 CCDC171Q6TFL3 1326 aa8.66□□□□□ -1.02
CDH1-203ENST00000561751 SENP3-EIF4A1A0A087X0R7 540 aa8.66□□□□□ -1.02
CDH1-203ENST00000561751 A0A1B0GUL7 405 aa8.66□□□□□ -1.02
CDH1-203ENST00000561751 TPM1P09493 284 aa8.66□□□□□ -1.02
CDH1-203ENST00000561751 HSPA1LP34931 641 aa8.66□□□□□ -1.02
CDH1-203ENST00000561751 GSCP56915 257 aaPredicted RBP8.66□□□□□ -1.02
CDH1-203ENST00000561751 SATB1Q01826 763 aa8.66□□□□□ -1.02
CDH1-203ENST00000561751 HSP90AB3PQ58FF7 597 aa8.66□□□□□ -1.02
CDH1-203ENST00000561751 CHD1LQ86WJ1 897 aa8.66□□□□□ -1.02
CDH1-203ENST00000561751 PXYLP1Q8TE99 480 aa8.66□□□□□ -1.02
CDH1-203ENST00000561751 RAI14Q9P0K7 980 aa8.66□□□□□ -1.02
CDH1-203ENST00000561751 RSPH14Q9UHP6 348 aa8.66□□□□□ -1.02
CDH1-203ENST00000561751 A2MP01023 1474 aa8.65□□□□□ -1.02
CDH1-203ENST00000561751 IPO8O15397 1037 aaKnown RBP8.65□□□□□ -1.02
CDH1-203ENST00000561751 ACTN4O43707 911 aaKnown RBP8.65□□□□□ -1.02
CDH1-203ENST00000561751 TLL1O43897 1013 aa8.65□□□□□ -1.02
CDH1-203ENST00000561751 CAVIN2O95810 425 aa8.65□□□□□ -1.02
CDH1-203ENST00000561751 MX1P20591 662 aa8.65□□□□□ -1.02
CDH1-203ENST00000561751 FECHP22830 423 aa8.65□□□□□ -1.02
CDH1-203ENST00000561751 CUL4AQ13619 759 aa8.65□□□□□ -1.02
CDH1-203ENST00000561751 LAPTM4AQ15012 233 aa8.65□□□□□ -1.02
CDH1-203ENST00000561751 CCDC91Q7Z6B0 441 aa8.65□□□□□ -1.02
CDH1-203ENST00000561751 MSL3Q8N5Y2 521 aaKnown RBP8.65□□□□□ -1.02
CDH1-203ENST00000561751 GOLGA5Q8TBA6 731 aa8.65□□□□□ -1.02
CDH1-203ENST00000561751 EMID1Q96A84 441 aaPredicted RBP8.65□□□□□ -1.02
CDH1-203ENST00000561751 RUNDC1Q96C34 613 aa8.65□□□□□ -1.02
CDH1-203ENST00000561751 CEP89Q96ST8 783 aa8.65□□□□□ -1.02
CDH1-203ENST00000561751 PRR14Q9BWN1 585 aa8.65□□□□□ -1.02
CDH1-203ENST00000561751 CLTCQ00610 1675 aaKnown RBP8.65□□□□□ -1.03
CDH1-203ENST00000561751 CPS1P31327 1500 aa8.64□□□□□ -1.03
CDH1-203ENST00000561751 ATP7AQ04656 1500 aa8.64□□□□□ -1.03
CDH1-203ENST00000561751 IL16Q14005 1332 aa8.64□□□□□ -1.03
CDH1-203ENST00000561751 GPR37O15354 613 aa8.64□□□□□ -1.03
CDH1-203ENST00000561751 RPS6KA5O75582 802 aa8.64□□□□□ -1.03
CDH1-203ENST00000561751 IVLP07476 585 aa8.64□□□□□ -1.03
CDH1-203ENST00000561751 CFHP08603 1231 aa8.64□□□□□ -1.03
CDH1-203ENST00000561751 TSC1Q92574 1164 aa8.64□□□□□ -1.03
CDH1-203ENST00000561751 DEF6Q9H4E7 631 aa8.64□□□□□ -1.03
CDH1-203ENST00000561751 ZBTB40Q9NUA8 1239 aa8.64□□□□□ -1.03
CDH1-203ENST00000561751 ZDHHC9Q9Y397 364 aa8.64□□□□□ -1.03
CDH1-203ENST00000561751 ALKQ9UM73 1620 aa8.64□□□□□ -1.03
CDH1-203ENST00000561751 ARHGEF5Q12774 1597 aa8.64□□□□□ -1.03
CDH1-203ENST00000561751 NEURL4Q96JN8 1562 aa8.64□□□□□ -1.03
CDH1-203ENST00000561751 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.63□□□□□ -1.03
CDH1-203ENST00000561751 CCDC196A0A1B0GTZ2 297 aa8.63□□□□□ -1.03
CDH1-203ENST00000561751 CD2BP2O95400 341 aaKnown RBP8.63□□□□□ -1.03
CDH1-203ENST00000561751 CPP00450 1065 aa8.63□□□□□ -1.03
CDH1-203ENST00000561751 RLBP1P12271 317 aa8.63□□□□□ -1.03
CDH1-203ENST00000561751 H2AFXP16104 143 aaPredicted RBP8.63□□□□□ -1.03
CDH1-203ENST00000561751 CDC25BP30305 580 aa8.63□□□□□ -1.03
CDH1-203ENST00000561751 MAGEA9P43362 315 aa8.63□□□□□ -1.03
CDH1-203ENST00000561751 RBM6P78332 1123 aaKnown RBP8.63□□□□□ -1.03
CDH1-203ENST00000561751 BANK1Q8NDB2 785 aa8.63□□□□□ -1.03
CDH1-203ENST00000561751 FBXO18Q8NFZ0 1043 aa8.63□□□□□ -1.03
CDH1-203ENST00000561751 UTP14AQ9BVJ6 771 aaKnown RBP8.63□□□□□ -1.03
CDH1-203ENST00000561751 TMUB1Q9BVT8 246 aa8.63□□□□□ -1.03
CDH1-203ENST00000561751 UBXN6Q9BZV1 441 aa8.63□□□□□ -1.03
CDH1-203ENST00000561751 TTC12Q9H892 705 aaPredicted RBP8.63□□□□□ -1.03
CDH1-203ENST00000561751 SLC52A1Q9NWF4 448 aa8.63□□□□□ -1.03
CDH1-203ENST00000561751 INO80Q9ULG1 1556 aaPredicted RBP8.63□□□□□ -1.03
CDH1-203ENST00000561751 A2ML1A8K2U0 1454 aa8.63□□□□□ -1.03
CDH1-203ENST00000561751 RNF223E7ERA6 249 aa8.62□□□□□ -1.03
CDH1-203ENST00000561751 MYO1CO00159 1063 aa8.62□□□□□ -1.03
CDH1-203ENST00000561751 NRG2O14511 850 aaPredicted RBP8.62□□□□□ -1.03
CDH1-203ENST00000561751 IGSF3O75054 1194 aa8.62□□□□□ -1.03
CDH1-203ENST00000561751 TNNT1P13805 278 aa8.62□□□□□ -1.03
CDH1-203ENST00000561751 ATP2B1P20020 1258 aa8.62□□□□□ -1.03
CDH1-203ENST00000561751 GGCXP38435 758 aa8.62□□□□□ -1.03
CDH1-203ENST00000561751 HIC1Q14526 733 aa8.62□□□□□ -1.03
CDH1-203ENST00000561751 KMT5BQ4FZB7 885 aa8.62□□□□□ -1.03
CDH1-203ENST00000561751 TBC1D9Q6ZT07 1266 aa8.62□□□□□ -1.03
CDH1-203ENST00000561751 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.62□□□□□ -1.03
CDH1-203ENST00000561751 EXOC4Q96A65 974 aa8.62□□□□□ -1.03
CDH1-203ENST00000561751 SIRT1Q96EB6 747 aa8.62□□□□□ -1.03
CDH1-203ENST00000561751 AK7Q96M32 723 aa8.62□□□□□ -1.03
CDH1-203ENST00000561751 FUCA2Q9BTY2 467 aa8.62□□□□□ -1.03
CDH1-203ENST00000561751 USP26Q9BXU7 913 aa8.62□□□□□ -1.03
CDH1-203ENST00000561751 FAM107BQ9H098 131 aa8.62□□□□□ -1.03
CDH1-203ENST00000561751 ATG3Q9NT62 314 aa8.62□□□□□ -1.03
CDH1-203ENST00000561751 BSDC1Q9NW68 430 aaPredicted RBP8.62□□□□□ -1.03
CDH1-203ENST00000561751 ARGLU1Q9NWB6 273 aaPredicted RBP8.62□□□□□ -1.03
CDH1-203ENST00000561751 JRKLQ9Y4A0 524 aa8.62□□□□□ -1.03
CDH1-203ENST00000561751 CROCC2H7BZ55 1655 aa8.62□□□□□ -1.03
CDH1-203ENST00000561751 KIF24Q5T7B8 1368 aa8.61□□□□□ -1.03
CDH1-203ENST00000561751 TOM1O60784 492 aa8.61□□□□□ -1.03
CDH1-203ENST00000561751 SLU7O95391 586 aaKnown RBP8.61□□□□□ -1.03
CDH1-203ENST00000561751 KCNJ6P48051 423 aa8.61□□□□□ -1.03
CDH1-203ENST00000561751 ANAPC15P60006 121 aa8.61□□□□□ -1.03
CDH1-203ENST00000561751 PIP4K2BP78356 416 aa8.61□□□□□ -1.03
CDH1-203ENST00000561751 ALDH1L2Q3SY69 923 aa8.61□□□□□ -1.03
CDH1-203ENST00000561751 INTS3Q68E01 1043 aaKnown RBP8.61□□□□□ -1.03
CDH1-203ENST00000561751 CASC1Q6TDU7 716 aa8.61□□□□□ -1.03
CDH1-203ENST00000561751 METTL3Q86U44 580 aaKnown RBP8.61□□□□□ -1.03
CDH1-203ENST00000561751 DHX37Q8IY37 1157 aaKnown RBP8.61□□□□□ -1.03
CDH1-203ENST00000561751 ARHGAP45Q92619 1136 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms