RNA–Protein interactions for RNA: ENST00000561662.1

COMMD4-204, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 482 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-204ENST00000561662 SNRPA1P09661 255 aaKnown RBP24.45■■□□□ 1.5
COMMD4-204ENST00000561662 LMOD1P29536 600 aaPredicted RBP24.45■■□□□ 1.5
COMMD4-204ENST00000561662 NUTM1Q86Y26 1132 aa24.45■■□□□ 1.5
COMMD4-204ENST00000561662 PER1O15534 1290 aaPredicted RBP24.44■■□□□ 1.5
COMMD4-204ENST00000561662 PRKAR2BP31323 418 aa24.44■■□□□ 1.5
COMMD4-204ENST00000561662 SCNN1DP51172 638 aa24.44■■□□□ 1.5
COMMD4-204ENST00000561662 CST9Q5W186 159 aa24.44■■□□□ 1.5
COMMD4-204ENST00000561662 MCM10Q7L590 875 aa24.44■■□□□ 1.5
COMMD4-204ENST00000561662 ABCC12Q96J65 1359 aa24.43■■□□□ 1.5
COMMD4-204ENST00000561662 NGEFQ8N5V2 710 aa24.43■■□□□ 1.5
COMMD4-204ENST00000561662 PSMD1Q99460 953 aa24.43■■□□□ 1.5
COMMD4-204ENST00000561662 SNED1Q8TER0 1413 aa24.43■■□□□ 1.5
COMMD4-204ENST00000561662 ECE1P42892 770 aa24.42■■□□□ 1.5
COMMD4-204ENST00000561662 DCTN1Q14203 1278 aa24.41■■□□□ 1.5
COMMD4-204ENST00000561662 LARGE2Q8N3Y3 721 aa24.41■■□□□ 1.5
COMMD4-204ENST00000561662 THSD7BQ9C0I4 1608 aa24.4■■□□□ 1.5
COMMD4-204ENST00000561662 RSPH6AQ9H0K4 717 aa24.39■■□□□ 1.49
COMMD4-204ENST00000561662 RPGRQ92834 1020 aaKnown RBP24.38■■□□□ 1.49
COMMD4-204ENST00000561662 MIS18AQ9NYP9 233 aa24.38■■□□□ 1.49
COMMD4-204ENST00000561662 TLL2Q9Y6L7 1015 aa24.38■■□□□ 1.49
COMMD4-204ENST00000561662 CRY2Q49AN0 593 aa24.37■■□□□ 1.49
COMMD4-204ENST00000561662 MCOLN1Q9GZU1 580 aa24.37■■□□□ 1.49
COMMD4-204ENST00000561662 RGS19P49795 217 aa24.36■■□□□ 1.49
COMMD4-204ENST00000561662 USP50Q70EL3 339 aaPredicted RBP24.36■■□□□ 1.49
COMMD4-204ENST00000561662 RTF1Q92541 710 aaKnown RBP24.36■■□□□ 1.49
COMMD4-204ENST00000561662 CELF2O95319 508 aaKnown RBP24.35■■□□□ 1.49
COMMD4-204ENST00000561662 GPTP24298 496 aa24.35■■□□□ 1.49
COMMD4-204ENST00000561662 TRPM7Q96QT4 1865 aa24.34■■□□□ 1.49
COMMD4-204ENST00000561662 NIM1KQ8IY84 436 aa24.34■■□□□ 1.49
COMMD4-204ENST00000561662 PPEF1O14829 653 aaPredicted RBP24.33■■□□□ 1.49
COMMD4-204ENST00000561662 AOC3Q16853 763 aa24.33■■□□□ 1.49
COMMD4-204ENST00000561662 CC2D2BQ6DHV5 1058 aa24.33■■□□□ 1.49
COMMD4-204ENST00000561662 C3orf67Q6ZVT6 689 aa24.33■■□□□ 1.49
COMMD4-204ENST00000561662 GLIS2Q9BZE0 524 aaPredicted RBP24.33■■□□□ 1.49
COMMD4-204ENST00000561662 NYXQ9GZU5 481 aa24.33■■□□□ 1.49
COMMD4-204ENST00000561662 ZNF408Q9H9D4 720 aa24.33■■□□□ 1.49
COMMD4-204ENST00000561662 CASP8AP2Q9UKL3 1982 aa24.33■■□□□ 1.48
COMMD4-204ENST00000561662 PPIP5K2O43314 1243 aa24.32■■□□□ 1.48
COMMD4-204ENST00000561662 TTLL7Q6ZT98 887 aa24.32■■□□□ 1.48
COMMD4-204ENST00000561662 MAP2K2P36507 400 aa24.31■■□□□ 1.48
COMMD4-204ENST00000561662 SAPCD2Q86UD0 394 aa24.31■■□□□ 1.48
COMMD4-204ENST00000561662 RRP7AQ9Y3A4 280 aaKnown RBP24.31■■□□□ 1.48
COMMD4-204ENST00000561662 UBN2Q6ZU65 1347 aa24.31■■□□□ 1.48
COMMD4-204ENST00000561662 RGL2O15211 777 aa24.3■■□□□ 1.48
COMMD4-204ENST00000561662 HOXA10P31260 410 aaPredicted RBP24.3■■□□□ 1.48
COMMD4-204ENST00000561662 RBM17Q96I25 401 aaKnown RBP24.3■■□□□ 1.48
COMMD4-204ENST00000561662 ZBTB3Q9H5J0 574 aa24.3■■□□□ 1.48
COMMD4-204ENST00000561662 GPRC5DQ9NZD1 345 aa24.3■■□□□ 1.48
COMMD4-204ENST00000561662 U2AF1L5P0DN76 240 aaPredicted RBP24.29■■□□□ 1.48
COMMD4-204ENST00000561662 U2AF1Q01081 240 aaKnown RBP eCLIP24.29■■□□□ 1.48
COMMD4-204ENST00000561662 DGKZQ13574 1117 aa24.29■■□□□ 1.48
COMMD4-204ENST00000561662 SUSD4Q5VX71 490 aa24.29■■□□□ 1.48
COMMD4-204ENST00000561662 CIAPIN1Q6FI81 312 aa24.29■■□□□ 1.48
COMMD4-204ENST00000561662 ADARB2Q9NS39 739 aaKnown RBP24.29■■□□□ 1.48
COMMD4-204ENST00000561662 MYL6BP14649 208 aa24.28■■□□□ 1.48
COMMD4-204ENST00000561662 GMPSP49915 693 aaPredicted RBP24.28■■□□□ 1.48
COMMD4-204ENST00000561662 ZIC5Q96T25 663 aa24.28■■□□□ 1.48
COMMD4-204ENST00000561662 MAP3K15Q6ZN16 1313 aa24.28■■□□□ 1.48
COMMD4-204ENST00000561662 NPC1L1Q9UHC9 1359 aa24.28■■□□□ 1.48
COMMD4-204ENST00000561662 CXCL9Q07325 125 aa24.27■■□□□ 1.48
COMMD4-204ENST00000561662 NUP98P52948 1817 aa24.26■■□□□ 1.47
COMMD4-204ENST00000561662 TAF7Q15545 349 aaPredicted RBP24.26■■□□□ 1.47
COMMD4-204ENST00000561662 DLK2Q6UY11 383 aa24.26■■□□□ 1.47
COMMD4-204ENST00000561662 KIF6Q6ZMV9 814 aa24.26■■□□□ 1.47
COMMD4-204ENST00000561662 CFAP53Q96M91 514 aa24.26■■□□□ 1.47
COMMD4-204ENST00000561662 CRAMP1Q96RY5 1269 aa24.26■■□□□ 1.47
COMMD4-204ENST00000561662 ERVV-1B6SEH8 477 aa24.25■■□□□ 1.47
COMMD4-204ENST00000561662 RIC1Q4ADV7 1423 aa24.25■■□□□ 1.47
COMMD4-204ENST00000561662 SHTN1A0MZ66 631 aa24.24■■□□□ 1.47
COMMD4-204ENST00000561662 TNRC18O15417 2968 aaPredicted RBP24.24■■□□□ 1.47
COMMD4-204ENST00000561662 NUDCQ9Y266 331 aa24.24■■□□□ 1.47
COMMD4-204ENST00000561662 CA12O43570 354 aa24.23■■□□□ 1.47
COMMD4-204ENST00000561662 RAD17O75943 681 aa24.23■■□□□ 1.47
COMMD4-204ENST00000561662 NTSR2O95665 410 aa24.23■■□□□ 1.47
COMMD4-204ENST00000561662 HIRAP54198 1017 aaPredicted RBP24.23■■□□□ 1.47
COMMD4-204ENST00000561662 BRPF1P55201 1214 aaPredicted RBP24.23■■□□□ 1.47
COMMD4-204ENST00000561662 GRIPAP1Q4V328 841 aa24.23■■□□□ 1.47
COMMD4-204ENST00000561662 TRPM4Q8TD43 1214 aa24.23■■□□□ 1.47
COMMD4-204ENST00000561662 ZNRF3Q9ULT6 936 aa24.23■■□□□ 1.47
COMMD4-204ENST00000561662 LAMB4A4D0S4 1761 aa24.23■■□□□ 1.47
COMMD4-204ENST00000561662 BCL2L13Q9BXK5 485 aa24.22■■□□□ 1.47
COMMD4-204ENST00000561662 TMX4Q9H1E5 349 aaPredicted RBP24.21■■□□□ 1.47
COMMD4-204ENST00000561662 ATP6V0A2Q9Y487 856 aa24.21■■□□□ 1.47
COMMD4-204ENST00000561662 ZNF34Q8IZ26 560 aa24.2■■□□□ 1.46
COMMD4-204ENST00000561662 PCDH10Q9P2E7 1040 aa24.2■■□□□ 1.46
COMMD4-204ENST00000561662 ABCC4O15439 1325 aa24.19■■□□□ 1.46
COMMD4-204ENST00000561662 USP48Q86UV5 1035 aa24.19■■□□□ 1.46
COMMD4-204ENST00000561662 IBTKQ9P2D0 1353 aaPredicted RBP24.18■■□□□ 1.46
COMMD4-204ENST00000561662 HTATSF1O43719 755 aaKnown RBP24.18■■□□□ 1.46
COMMD4-204ENST00000561662 SOX10P56693 466 aa24.18■■□□□ 1.46
COMMD4-204ENST00000561662 HUNKP57058 714 aa24.18■■□□□ 1.46
COMMD4-204ENST00000561662 HHIPL1Q96JK4 782 aa24.18■■□□□ 1.46
COMMD4-204ENST00000561662 NLRP3Q96P20 1036 aa24.18■■□□□ 1.46
COMMD4-204ENST00000561662 EIF4A1P60842 406 aaKnown RBP24.17■■□□□ 1.46
COMMD4-204ENST00000561662 DPP8Q6V1X1 898 aaPredicted RBP24.17■■□□□ 1.46
COMMD4-204ENST00000561662 THUMPD2Q9BTF0 503 aaKnown RBP24.17■■□□□ 1.46
COMMD4-204ENST00000561662 PGAP2Q9UHJ9 254 aa24.17■■□□□ 1.46
COMMD4-204ENST00000561662 CDC37L1Q7L3B6 337 aa24.16■■□□□ 1.46
COMMD4-204ENST00000561662 PPP1R42Q7Z4L9 355 aa24.16■■□□□ 1.46
COMMD4-204ENST00000561662 ZNF428Q96B54 188 aa24.16■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms