RNA–Protein interactions for RNA: ENST00000561637.5

NME3-202, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 1,014 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-202ENST00000561637 CCDC93Q567U6 631 aa33.13■■■□□ 2.89
NME3-202ENST00000561637 ZNF277Q9NRM2 450 aaPredicted RBP33.13■■■□□ 2.89
NME3-202ENST00000561637 NUP98P52948 1817 aa33.13■■■□□ 2.89
NME3-202ENST00000561637 ABCC12Q96J65 1359 aa33.11■■■□□ 2.89
NME3-202ENST00000561637 CHL1O00533 1208 aa33.11■■■□□ 2.89
NME3-202ENST00000561637 RGL2O15211 777 aa33.11■■■□□ 2.89
NME3-202ENST00000561637 ZEB1P37275 1124 aaPredicted RBP33.11■■■□□ 2.89
NME3-202ENST00000561637 CTCFP49711 727 aaPredicted RBP33.11■■■□□ 2.89
NME3-202ENST00000561637 BABAM1Q9NWV8 329 aa33.11■■■□□ 2.89
NME3-202ENST00000561637 GPTP24298 496 aa33.1■■■□□ 2.89
NME3-202ENST00000561637 FKBP4Q02790 459 aaKnown RBP eCLIP33.1■■■□□ 2.89
NME3-202ENST00000561637 KIF6Q6ZMV9 814 aa33.1■■■□□ 2.89
NME3-202ENST00000561637 UBN2Q6ZU65 1347 aa33.09■■■□□ 2.89
NME3-202ENST00000561637 ERVV-1B6SEH8 477 aa33.09■■■□□ 2.89
NME3-202ENST00000561637 NPR1P16066 1061 aa33.09■■■□□ 2.89
NME3-202ENST00000561637 AIDAQ96BJ3 306 aa33.09■■■□□ 2.89
NME3-202ENST00000561637 WBP1LQ9NX94 342 aa33.09■■■□□ 2.89
NME3-202ENST00000561637 HACL1Q9UJ83 578 aa33.09■■■□□ 2.89
NME3-202ENST00000561637 CLEC11AQ9Y240 323 aa33.09■■■□□ 2.89
NME3-202ENST00000561637 KLRG2A4D1S0 409 aaPredicted RBP33.08■■■□□ 2.89
NME3-202ENST00000561637 NUTM1Q86Y26 1132 aa33.08■■■□□ 2.89
NME3-202ENST00000561637 ERBB4Q15303 1308 aa33.07■■■□□ 2.88
NME3-202ENST00000561637 APAF1O14727 1248 aa33.07■■■□□ 2.88
NME3-202ENST00000561637 LBX1P52954 281 aa33.07■■■□□ 2.88
NME3-202ENST00000561637 TPTE2Q6XPS3 522 aa33.07■■■□□ 2.88
NME3-202ENST00000561637 EPHX2P34913 555 aa33.06■■■□□ 2.88
NME3-202ENST00000561637 RNF123Q5XPI4 1314 aa33.05■■■□□ 2.88
NME3-202ENST00000561637 MAP1SQ66K74 1059 aaPredicted RBP33.04■■■□□ 2.88
NME3-202ENST00000561637 SUSD4Q5VX71 490 aa33.03■■■□□ 2.88
NME3-202ENST00000561637 RASSF10A6NK89 507 aa33.02■■■□□ 2.88
NME3-202ENST00000561637 ZNF34Q8IZ26 560 aa33.02■■■□□ 2.88
NME3-202ENST00000561637 CNTROBQ8N137 903 aa33.02■■■□□ 2.88
NME3-202ENST00000561637 FZD9O00144 591 aa33.01■■■□□ 2.87
NME3-202ENST00000561637 RTKN2Q8IZC4 609 aa33.01■■■□□ 2.87
NME3-202ENST00000561637 SYNE4Q8N205 404 aa33.01■■■□□ 2.87
NME3-202ENST00000561637 GTF2E1P29083 439 aaPredicted RBP33■■■□□ 2.87
NME3-202ENST00000561637 IARSP41252 1262 aaKnown RBP33■■■□□ 2.87
NME3-202ENST00000561637 DEFB115Q30KQ5 88 aa33■■■□□ 2.87
NME3-202ENST00000561637 GIGYF2Q6Y7W6 1299 aaKnown RBP33■■■□□ 2.87
NME3-202ENST00000561637 XAGE3Q8WTP9 111 aa33■■■□□ 2.87
NME3-202ENST00000561637 ZNF316A6NFI3 1004 aaPredicted RBP32.99■■■□□ 2.87
NME3-202ENST00000561637 HSPA8P11142 646 aaKnown RBP32.99■■■□□ 2.87
NME3-202ENST00000561637 AIMP1Q12904 312 aaKnown RBP32.99■■■□□ 2.87
NME3-202ENST00000561637 MBIPQ9NS73 344 aa32.99■■■□□ 2.87
NME3-202ENST00000561637 LTBP1Q14766 1721 aa32.98■■■□□ 2.87
NME3-202ENST00000561637 C3orf67Q6ZVT6 689 aa32.98■■■□□ 2.87
NME3-202ENST00000561637 COPS6Q7L5N1 327 aa32.98■■■□□ 2.87
NME3-202ENST00000561637 SLC51AQ86UW1 340 aa32.98■■■□□ 2.87
NME3-202ENST00000561637 PNMA8AQ86V59 439 aaPredicted RBP32.98■■■□□ 2.87
NME3-202ENST00000561637 SNED1Q8TER0 1413 aa32.98■■■□□ 2.87
NME3-202ENST00000561637 CHPF2Q9P2E5 772 aa32.98■■■□□ 2.87
NME3-202ENST00000561637 COL4A5P29400 1685 aa32.97■■■□□ 2.87
NME3-202ENST00000561637 NTSR2O95665 410 aa32.97■■■□□ 2.87
NME3-202ENST00000561637 CFAP44Q96MT7 982 aa32.97■■■□□ 2.87
NME3-202ENST00000561637 ZNF428Q96B54 188 aa32.96■■■□□ 2.87
NME3-202ENST00000561637 NYXQ9GZU5 481 aa32.96■■■□□ 2.87
NME3-202ENST00000561637 WDR33Q9C0J8 1336 aaKnown RBP32.96■■■□□ 2.87
NME3-202ENST00000561637 ZNF853P0CG23 659 aa32.95■■■□□ 2.87
NME3-202ENST00000561637 GPC2Q8N158 579 aa32.95■■■□□ 2.87
NME3-202ENST00000561637 ALDH1B1P30837 517 aa32.94■■■□□ 2.86
NME3-202ENST00000561637 HDGFL1Q5TGJ6 251 aa32.94■■■□□ 2.86
NME3-202ENST00000561637 DDX21Q9NR30 783 aaKnown RBP eCLIP32.94■■■□□ 2.86
NME3-202ENST00000561637 IBTKQ9P2D0 1353 aaPredicted RBP32.94■■■□□ 2.86
NME3-202ENST00000561637 FMR1Q06787 632 aaKnown RBP eCLIP32.93■■■□□ 2.868e-6■■□□□ 11.8
NME3-202ENST00000561637 DUSP27Q5VZP5 1158 aa32.93■■■□□ 2.86
NME3-202ENST00000561637 ABHD8Q96I13 439 aa32.93■■■□□ 2.86
NME3-202ENST00000561637 CRY2Q49AN0 593 aa32.92■■■□□ 2.86
NME3-202ENST00000561637 ABT1Q9ULW3 272 aaKnown RBP32.92■■■□□ 2.86
NME3-202ENST00000561637 TRPM7Q96QT4 1865 aa32.91■■■□□ 2.86
NME3-202ENST00000561637 PSMD1Q99460 953 aa32.9■■■□□ 2.86
NME3-202ENST00000561637 GJA3Q9Y6H8 435 aa32.9■■■□□ 2.86
NME3-202ENST00000561637 ANKRD36CQ5JPF3 1778 aa32.89■■■□□ 2.86
NME3-202ENST00000561637 THSD7BQ9C0I4 1608 aa32.89■■■□□ 2.86
NME3-202ENST00000561637 MAP2K1Q02750 393 aaPredicted RBP32.89■■■□□ 2.86
NME3-202ENST00000561637 JDP2Q8WYK2 163 aa32.89■■■□□ 2.86
NME3-202ENST00000561637 RIC1Q4ADV7 1423 aa32.88■■■□□ 2.85
NME3-202ENST00000561637 IFT57Q9NWB7 429 aa32.88■■■□□ 2.85
NME3-202ENST00000561637 ELL2O00472 640 aaPredicted RBP32.87■■■□□ 2.85
NME3-202ENST00000561637 PARP10Q53GL7 1025 aa32.87■■■□□ 2.85
NME3-202ENST00000561637 HOXB7P09629 217 aa32.86■■■□□ 2.85
NME3-202ENST00000561637 FAM161AQ3B820 660 aa32.86■■■□□ 2.85
NME3-202ENST00000561637 NLRP10Q86W26 655 aa32.86■■■□□ 2.85
NME3-202ENST00000561637 UTP14AQ9BVJ6 771 aaKnown RBP32.86■■■□□ 2.85
NME3-202ENST00000561637 EPS15P42566 896 aa32.85■■■□□ 2.85
NME3-202ENST00000561637 SCNN1DP51172 638 aa32.85■■■□□ 2.85
NME3-202ENST00000561637 PPP1R42Q7Z4L9 355 aa32.85■■■□□ 2.85
NME3-202ENST00000561637 MRS2Q9HD23 443 aa32.85■■■□□ 2.85
NME3-202ENST00000561637 EIF6P56537 245 aaKnown RBP32.84■■■□□ 2.85
NME3-202ENST00000561637 GNAI1P63096 354 aa32.84■■■□□ 2.85
NME3-202ENST00000561637 TCIRG1Q13488 830 aa32.84■■■□□ 2.85
NME3-202ENST00000561637 C8orf58Q8NAV2 365 aa32.84■■■□□ 2.85
NME3-202ENST00000561637 RPGRQ92834 1020 aaKnown RBP32.84■■■□□ 2.85
NME3-202ENST00000561637 SLC34A2O95436 690 aa32.83■■■□□ 2.85
NME3-202ENST00000561637 HOXA10P31260 410 aaPredicted RBP32.83■■■□□ 2.85
NME3-202ENST00000561637 CAPNS2Q96L46 248 aa32.83■■■□□ 2.85
NME3-202ENST00000561637 DBF4Q9UBU7 674 aaPredicted RBP32.82■■■□□ 2.84
NME3-202ENST00000561637 TCERG1O14776 1098 aaKnown RBP32.81■■■□□ 2.84
NME3-202ENST00000561637 HCLS1P14317 486 aaPredicted RBP32.81■■■□□ 2.84
NME3-202ENST00000561637 LMOD1P29536 600 aaPredicted RBP32.81■■■□□ 2.84
NME3-202ENST00000561637 CST9Q5W186 159 aa32.81■■■□□ 2.84
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms