RNA–Protein interactions for RNA: ENST00000561431.1

LRRC28-222, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-222ENST00000561431 TPSG1Q9NRR2 321 aa6.84□□□□□ -1.31
LRRC28-222ENST00000561431 PCDHGC4Q9Y5F7 938 aa6.84□□□□□ -1.31
LRRC28-222ENST00000561431 EIF4G1Q04637 1599 aaKnown RBP6.83□□□□□ -1.32
LRRC28-222ENST00000561431 SSFA2P28290 1259 aa6.83□□□□□ -1.32
LRRC28-222ENST00000561431 ARID4AP29374 1257 aaPredicted RBP6.83□□□□□ -1.32
LRRC28-222ENST00000561431 SMTNP53814 917 aa6.83□□□□□ -1.32
LRRC28-222ENST00000561431 PPARGC1BQ86YN6 1023 aaKnown RBP6.83□□□□□ -1.32
LRRC28-222ENST00000561431 MKNK1Q9BUB5 465 aa6.83□□□□□ -1.32
LRRC28-222ENST00000561431 IVNS1ABPQ9Y6Y0 642 aa6.83□□□□□ -1.32
LRRC28-222ENST00000561431 A6NJY4 79 aa6.82□□□□□ -1.32
LRRC28-222ENST00000561431 DYRK3O43781 588 aa6.82□□□□□ -1.32
LRRC28-222ENST00000561431 PPP1R12BO60237 982 aaPredicted RBP6.82□□□□□ -1.32
LRRC28-222ENST00000561431 ATP4AP20648 1035 aa6.82□□□□□ -1.32
LRRC28-222ENST00000561431 TBCELQ5QJ74 424 aa6.82□□□□□ -1.32
LRRC28-222ENST00000561431 FAM182BQ5T319 152 aa6.82□□□□□ -1.32
LRRC28-222ENST00000561431 AVENQ9NQS1 362 aaPredicted RBP6.82□□□□□ -1.32
LRRC28-222ENST00000561431 CC2D2AQ9P2K1 1620 aa6.82□□□□□ -1.32
LRRC28-222ENST00000561431 ABL1P00519 1130 aa6.81□□□□□ -1.32
LRRC28-222ENST00000561431 CD33P20138 364 aa6.81□□□□□ -1.32
LRRC28-222ENST00000561431 NLRP8Q86W28 1048 aa6.81□□□□□ -1.32
LRRC28-222ENST00000561431 KRTAP19-1Q8IUB9 90 aa6.81□□□□□ -1.32
LRRC28-222ENST00000561431 GAS2L2Q8NHY3 880 aa6.81□□□□□ -1.32
LRRC28-222ENST00000561431 TSPAN10Q9H1Z9 355 aaPredicted RBP6.81□□□□□ -1.32
LRRC28-222ENST00000561431 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.81□□□□□ -1.32
LRRC28-222ENST00000561431 CXXC1Q9P0U4 656 aaPredicted RBP6.81□□□□□ -1.32
LRRC28-222ENST00000561431 ZNF232Q9UNY5 417 aa6.81□□□□□ -1.32
LRRC28-222ENST00000561431 ATAD2Q6PL18 1390 aa6.81□□□□□ -1.32
LRRC28-222ENST00000561431 DCDC2BA2VCK2 349 aa6.8□□□□□ -1.32
LRRC28-222ENST00000561431 ATXN7O15265 892 aaPredicted RBP6.8□□□□□ -1.32
LRRC28-222ENST00000561431 MAPTP10636 758 aaKnown RBP6.8□□□□□ -1.32
LRRC28-222ENST00000561431 PLA2G4AP47712 749 aa6.8□□□□□ -1.32
LRRC28-222ENST00000561431 TNP2Q05952 138 aa6.8□□□□□ -1.32
LRRC28-222ENST00000561431 SLC9A9Q8IVB4 645 aa6.8□□□□□ -1.32
LRRC28-222ENST00000561431 SLC4A9Q96Q91 983 aa6.8□□□□□ -1.32
LRRC28-222ENST00000561431 CABP1Q9NZU7 370 aa6.8□□□□□ -1.32
LRRC28-222ENST00000561431 SLAIN2Q9P270 581 aa6.8□□□□□ -1.32
LRRC28-222ENST00000561431 BTBD11A6QL63 1104 aa6.79□□□□□ -1.32
LRRC28-222ENST00000561431 IGFBP4P22692 258 aa6.79□□□□□ -1.32
LRRC28-222ENST00000561431 WEE1P30291 646 aa6.79□□□□□ -1.32
LRRC28-222ENST00000561431 RANGAP1P46060 587 aaPredicted RBP6.79□□□□□ -1.32
LRRC28-222ENST00000561431 PCBP4P57723 403 aaKnown RBP6.79□□□□□ -1.32
LRRC28-222ENST00000561431 OCLNQ16625 522 aa6.79□□□□□ -1.32
LRRC28-222ENST00000561431 PRSS36Q5K4E3 855 aa6.79□□□□□ -1.32
LRRC28-222ENST00000561431 TMCO4Q5TGY1 634 aa6.79□□□□□ -1.32
LRRC28-222ENST00000561431 SCHIP1Q9P0W5 487 aaPredicted RBP6.79□□□□□ -1.32
LRRC28-222ENST00000561431 CCDC9Q9Y3X0 531 aaKnown RBP6.79□□□□□ -1.32
LRRC28-222ENST00000561431 CDK2AP1O14519 115 aa6.78□□□□□ -1.32
LRRC28-222ENST00000561431 PTCD1O75127 700 aaKnown RBP6.78□□□□□ -1.32
LRRC28-222ENST00000561431 SCNN1AP37088 669 aa6.78□□□□□ -1.32
LRRC28-222ENST00000561431 PSMA6P60900 246 aaKnown RBP6.78□□□□□ -1.32
LRRC28-222ENST00000561431 ZNF468Q5VIY5 522 aaPredicted RBP6.78□□□□□ -1.32
LRRC28-222ENST00000561431 PHLDB3Q6NSJ2 640 aa6.78□□□□□ -1.32
LRRC28-222ENST00000561431 NBPF11Q86T75 865 aa6.78□□□□□ -1.32
LRRC28-222ENST00000561431 C1orf216Q8TAB5 229 aa6.78□□□□□ -1.32
LRRC28-222ENST00000561431 SERTM1A2A2V5 107 aa6.77□□□□□ -1.33
LRRC28-222ENST00000561431 FOXO3O43524 673 aa6.77□□□□□ -1.33
LRRC28-222ENST00000561431 FKBP5Q13451 457 aaPredicted RBP6.77□□□□□ -1.33
LRRC28-222ENST00000561431 NAA30Q147X3 362 aaPredicted RBP6.77□□□□□ -1.33
LRRC28-222ENST00000561431 NGLY1Q96IV0 654 aa6.77□□□□□ -1.33
LRRC28-222ENST00000561431 NIFKQ9BYG3 293 aaKnown RBP6.77□□□□□ -1.33
LRRC28-222ENST00000561431 BIN2Q9UBW5 565 aaPredicted RBP6.77□□□□□ -1.33
LRRC28-222ENST00000561431 KRTAP4-8A0A0G2JLE6 195 aa6.76□□□□□ -1.33
LRRC28-222ENST00000561431 KHNYNO15037 678 aaKnown RBP6.76□□□□□ -1.33
LRRC28-222ENST00000561431 SERPINB4P48594 390 aa6.76□□□□□ -1.33
LRRC28-222ENST00000561431 MTFR1Q15390 333 aa6.76□□□□□ -1.33
LRRC28-222ENST00000561431 PRRT3Q5FWE3 981 aa6.76□□□□□ -1.33
LRRC28-222ENST00000561431 AIDAQ96BJ3 306 aa6.76□□□□□ -1.33
LRRC28-222ENST00000561431 ANO2Q9NQ90 1003 aa6.76□□□□□ -1.33
LRRC28-222ENST00000561431 PARP3Q9Y6F1 533 aa6.76□□□□□ -1.33
LRRC28-222ENST00000561431 CECR2Q9BXF3 1484 aa6.76□□□□□ -1.33
LRRC28-222ENST00000561431 A0A1W2PNR3 127 aa6.75□□□□□ -1.33
LRRC28-222ENST00000561431 SPDYE3A6NKU9 549 aa6.75□□□□□ -1.33
LRRC28-222ENST00000561431 EPHA4P54764 986 aa6.75□□□□□ -1.33
LRRC28-222ENST00000561431 TXNDC2Q86VQ3 553 aa6.75□□□□□ -1.33
LRRC28-222ENST00000561431 GTF3C2Q8WUA4 911 aaPredicted RBP6.75□□□□□ -1.33
LRRC28-222ENST00000561431 MDFIQ99750 246 aa6.75□□□□□ -1.33
LRRC28-222ENST00000561431 SEPT3Q9UH03 358 aa6.75□□□□□ -1.33
LRRC28-222ENST00000561431 GNEQ9Y223 722 aaKnown RBP6.75□□□□□ -1.33
LRRC28-222ENST00000561431 ELOA3CA0A087WX78 387 aaPredicted RBP6.74□□□□□ -1.33
LRRC28-222ENST00000561431 ELOA3DA6NLF2 546 aaPredicted RBP6.74□□□□□ -1.33
LRRC28-222ENST00000561431 FAM229AH3BQW9 127 aa6.74□□□□□ -1.33
LRRC28-222ENST00000561431 C21orf2O43822 256 aa6.74□□□□□ -1.33
LRRC28-222ENST00000561431 APBA3O96018 575 aa6.74□□□□□ -1.33
LRRC28-222ENST00000561431 FAM157BP0CG42 384 aa6.74□□□□□ -1.33
LRRC28-222ENST00000561431 ZNF211Q13398 564 aaPredicted RBP6.74□□□□□ -1.33
LRRC28-222ENST00000561431 COL9A3Q14050 684 aaPredicted RBP6.74□□□□□ -1.33
LRRC28-222ENST00000561431 ELOA3BQ3SY89 546 aa6.74□□□□□ -1.33
LRRC28-222ENST00000561431 GLYCTKQ8IVS8 523 aa6.74□□□□□ -1.33
LRRC28-222ENST00000561431 ELOA3Q8NG57 546 aa6.74□□□□□ -1.33
LRRC28-222ENST00000561431 L3MBTL2Q969R5 705 aa6.74□□□□□ -1.33
LRRC28-222ENST00000561431 STRN4Q9NRL3 753 aa6.74□□□□□ -1.33
LRRC28-222ENST00000561431 PRR12Q9ULL5 1215 aa6.74□□□□□ -1.33
LRRC28-222ENST00000561431 HCN4Q9Y3Q4 1203 aa6.74□□□□□ -1.33
LRRC28-222ENST00000561431 H3BRB1 525 aa6.73□□□□□ -1.33
LRRC28-222ENST00000561431 NOS2P35228 1153 aa6.73□□□□□ -1.33
LRRC28-222ENST00000561431 AAMPQ13685 434 aa6.73□□□□□ -1.33
LRRC28-222ENST00000561431 LRP8Q14114 963 aa6.73□□□□□ -1.33
LRRC28-222ENST00000561431 TEAD4Q15561 434 aa6.73□□□□□ -1.33
LRRC28-222ENST00000561431 NBPF1Q3BBV0 1214 aa6.73□□□□□ -1.33
LRRC28-222ENST00000561431 ARSJQ5FYB0 599 aaPredicted RBP6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms