RNA–Protein interactions for RNA: ENST00000561377.1

HMBOX1-216, Transcript of homeobox containing 1, humanhuman

TSL 5

Gene HMBOX1, Length 307 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-216ENST00000561377 LGR5O75473 907 aa10.28□□□□□ -0.76
HMBOX1-216ENST00000561377 PROCP04070 461 aa10.28□□□□□ -0.76
HMBOX1-216ENST00000561377 ARXQ96QS3 562 aa10.28□□□□□ -0.76
HMBOX1-216ENST00000561377 TGFBR3LH3BV60 316 aa10.27□□□□□ -0.77
HMBOX1-216ENST00000561377 FAM200AQ8TCP9 573 aa10.27□□□□□ -0.77
HMBOX1-216ENST00000561377 FOXO3O43524 673 aa10.26□□□□□ -0.77
HMBOX1-216ENST00000561377 RAB44Q7Z6P3 723 aaPredicted RBP10.26□□□□□ -0.77
HMBOX1-216ENST00000561377 TRIM11Q96F44 468 aa10.26□□□□□ -0.77
HMBOX1-216ENST00000561377 EFCC1Q9HA90 598 aa10.26□□□□□ -0.77
HMBOX1-216ENST00000561377 SPDYE3A6NKU9 549 aa10.25□□□□□ -0.77
HMBOX1-216ENST00000561377 RFX1P22670 979 aa10.25□□□□□ -0.77
HMBOX1-216ENST00000561377 ADH7P40394 386 aa10.25□□□□□ -0.77
HMBOX1-216ENST00000561377 BHMTQ93088 406 aa10.25□□□□□ -0.77
HMBOX1-216ENST00000561377 VTI1AQ96AJ9 217 aa10.25□□□□□ -0.77
HMBOX1-216ENST00000561377 PLVAPQ9BX97 442 aa10.25□□□□□ -0.77
HMBOX1-216ENST00000561377 WEE1P30291 646 aa10.24□□□□□ -0.77
HMBOX1-216ENST00000561377 M0R082 166 aa10.23□□□□□ -0.77
HMBOX1-216ENST00000561377 EPB42P16452 691 aa10.23□□□□□ -0.77
HMBOX1-216ENST00000561377 CDCA8Q53HL2 280 aa10.23□□□□□ -0.77
HMBOX1-216ENST00000561377 ZNF417Q8TAU3 575 aa10.23□□□□□ -0.77
HMBOX1-216ENST00000561377 ZNF587Q96SQ5 575 aaPredicted RBP10.23□□□□□ -0.77
HMBOX1-216ENST00000561377 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.23□□□□□ -0.77
HMBOX1-216ENST00000561377 SPATA31C1P0DKV0 1188 aa10.22□□□□□ -0.77
HMBOX1-216ENST00000561377 PRDM6Q9NQX0 595 aa10.22□□□□□ -0.77
HMBOX1-216ENST00000561377 C1QTNF9BB2RNN3 333 aa10.21□□□□□ -0.77
HMBOX1-216ENST00000561377 BAG6P46379 1132 aa10.21□□□□□ -0.77
HMBOX1-216ENST00000561377 PNMA5Q96PV4 448 aa10.21□□□□□ -0.77
HMBOX1-216ENST00000561377 UBE2OQ9C0C9 1292 aaKnown RBP10.21□□□□□ -0.77
HMBOX1-216ENST00000561377 DMGDHQ9UI17 866 aaKnown RBP10.21□□□□□ -0.77
HMBOX1-216ENST00000561377 NOVA2Q9UNW9 492 aaKnown RBP10.21□□□□□ -0.77
HMBOX1-216ENST00000561377 BCS1LQ9Y276 419 aa10.21□□□□□ -0.77
HMBOX1-216ENST00000561377 STARD13Q9Y3M8 1113 aa10.21□□□□□ -0.77
HMBOX1-216ENST00000561377 ALBP02768 609 aa10.2□□□□□ -0.78
HMBOX1-216ENST00000561377 DGKZQ13574 1117 aa10.2□□□□□ -0.78
HMBOX1-216ENST00000561377 PRRT3Q5FWE3 981 aa10.2□□□□□ -0.78
HMBOX1-216ENST00000561377 CD163Q86VB7 1156 aa10.2□□□□□ -0.78
HMBOX1-216ENST00000561377 MICALL1Q8N3F8 863 aa10.2□□□□□ -0.78
HMBOX1-216ENST00000561377 GSX2Q9BZM3 304 aa10.2□□□□□ -0.78
HMBOX1-216ENST00000561377 KLK14Q9P0G3 267 aa10.2□□□□□ -0.78
HMBOX1-216ENST00000561377 CHRNA4P43681 627 aa10.19□□□□□ -0.78
HMBOX1-216ENST00000561377 IDH3AP50213 366 aa10.19□□□□□ -0.78
HMBOX1-216ENST00000561377 TBC1D8BQ0IIM8 1120 aa10.19□□□□□ -0.78
HMBOX1-216ENST00000561377 CCINQ13939 588 aa10.19□□□□□ -0.78
HMBOX1-216ENST00000561377 MYO19Q96H55 970 aa10.19□□□□□ -0.78
HMBOX1-216ENST00000561377 QTRT2Q9H974 415 aaKnown RBP10.19□□□□□ -0.78
HMBOX1-216ENST00000561377 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.19□□□□□ -0.78
HMBOX1-216ENST00000561377 LOC100996750A0A140TA64 210 aa10.18□□□□□ -0.78
HMBOX1-216ENST00000561377 ADAM23O75077 832 aa10.18□□□□□ -0.78
HMBOX1-216ENST00000561377 SWI5Q1ZZU3 235 aa10.18□□□□□ -0.78
HMBOX1-216ENST00000561377 C11orf91Q3C1V1 193 aa10.18□□□□□ -0.78
HMBOX1-216ENST00000561377 KRTAP4-6Q9BYQ5 205 aa10.18□□□□□ -0.78
HMBOX1-216ENST00000561377 ARSDP51689 593 aa10.17□□□□□ -0.78
HMBOX1-216ENST00000561377 ELOAQ14241 798 aaKnown RBP10.17□□□□□ -0.78
HMBOX1-216ENST00000561377 C20orf204Q6ZNR8 217 aa10.17□□□□□ -0.78
HMBOX1-216ENST00000561377 IGFLR1Q9H665 355 aa10.17□□□□□ -0.78
HMBOX1-216ENST00000561377 SLC6A14Q9UN76 642 aa10.17□□□□□ -0.78
HMBOX1-216ENST00000561377 ACIN1Q9UKV3 1341 aaKnown RBP10.16□□□□□ -0.78
HMBOX1-216ENST00000561377 LILRB5O75023 590 aa10.16□□□□□ -0.78
HMBOX1-216ENST00000561377 INPP5BP32019 993 aa10.16□□□□□ -0.78
HMBOX1-216ENST00000561377 COL9A3Q14050 684 aaPredicted RBP10.16□□□□□ -0.78
HMBOX1-216ENST00000561377 C11orf16Q9NQ32 467 aa10.16□□□□□ -0.78
HMBOX1-216ENST00000561377 K7ELQ4 463 aaPredicted RBP10.15□□□□□ -0.78
HMBOX1-216ENST00000561377 MICAL2O94851 1124 aa10.15□□□□□ -0.78
HMBOX1-216ENST00000561377 NID1P14543 1247 aa10.15□□□□□ -0.78
HMBOX1-216ENST00000561377 NFKB1P19838 968 aa10.15□□□□□ -0.78
HMBOX1-216ENST00000561377 C8orf86Q6ZUL3 223 aa10.15□□□□□ -0.78
HMBOX1-216ENST00000561377 ZMYND15Q9H091 742 aa10.15□□□□□ -0.78
HMBOX1-216ENST00000561377 APBA3O96018 575 aa10.14□□□□□ -0.79
HMBOX1-216ENST00000561377 TRIM28Q13263 835 aaKnown RBP10.14□□□□□ -0.79
HMBOX1-216ENST00000561377 PCSK7Q16549 785 aa10.14□□□□□ -0.79
HMBOX1-216ENST00000561377 DNAJB12Q9NXW2 375 aaKnown RBP10.14□□□□□ -0.79
HMBOX1-216ENST00000561377 FKBP5Q13451 457 aaPredicted RBP10.13□□□□□ -0.79
HMBOX1-216ENST00000561377 ZMIZ1Q9ULJ6 1067 aa10.13□□□□□ -0.79
HMBOX1-216ENST00000561377 GRNP28799 593 aaKnown RBP10.12□□□□□ -0.79
HMBOX1-216ENST00000561377 GATA4P43694 442 aa10.12□□□□□ -0.79
HMBOX1-216ENST00000561377 IFT43Q96FT9 208 aa10.12□□□□□ -0.79
HMBOX1-216ENST00000561377 PRIMPOLQ96LW4 560 aa10.12□□□□□ -0.79
HMBOX1-216ENST00000561377 NACC1Q96RE7 527 aa10.12□□□□□ -0.79
HMBOX1-216ENST00000561377 JPH1Q9HDC5 661 aaPredicted RBP10.12□□□□□ -0.79
HMBOX1-216ENST00000561377 PRMT3O60678 531 aa10.11□□□□□ -0.79
HMBOX1-216ENST00000561377 MAP3K6O95382 1288 aa10.11□□□□□ -0.79
HMBOX1-216ENST00000561377 FURINP09958 794 aa10.11□□□□□ -0.79
HMBOX1-216ENST00000561377 TRAPPC3LQ5T215 181 aa10.11□□□□□ -0.79
HMBOX1-216ENST00000561377 LRFN2Q9ULH4 789 aa10.11□□□□□ -0.79
HMBOX1-216ENST00000561377 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.1□□□□□ -0.79
HMBOX1-216ENST00000561377 FAM229AH3BQW9 127 aa10.1□□□□□ -0.79
HMBOX1-216ENST00000561377 ATG7O95352 703 aa10.1□□□□□ -0.79
HMBOX1-216ENST00000561377 PSAPL1Q6NUJ1 521 aa10.1□□□□□ -0.79
HMBOX1-216ENST00000561377 KRT25Q7Z3Z0 450 aa10.1□□□□□ -0.79
HMBOX1-216ENST00000561377 NUDT8Q8WV74 236 aa10.1□□□□□ -0.79
HMBOX1-216ENST00000561377 SRPK2P78362 688 aaKnown RBP10.09□□□□□ -0.79
HMBOX1-216ENST00000561377 COX20Q5RI15 118 aa10.09□□□□□ -0.79
HMBOX1-216ENST00000561377 STK32AQ8WU08 396 aa10.09□□□□□ -0.79
HMBOX1-216ENST00000561377 CCDC97Q96F63 343 aaPredicted RBP10.09□□□□□ -0.79
HMBOX1-216ENST00000561377 RTCBQ9Y3I0 505 aaKnown RBP10.09□□□□□ -0.79
HMBOX1-216ENST00000561377 RGS9O75916 674 aaPredicted RBP10.08□□□□□ -0.8
HMBOX1-216ENST00000561377 RARAP10276 462 aa10.08□□□□□ -0.8
HMBOX1-216ENST00000561377 ARID4AP29374 1257 aaPredicted RBP10.08□□□□□ -0.8
HMBOX1-216ENST00000561377 FAM69CQ0P6D2 419 aa10.08□□□□□ -0.8
HMBOX1-216ENST00000561377 OCLNQ16625 522 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms