RNA–Protein interactions for RNA: ENST00000561235.5

TCF12-223, Transcript of transcription factor 12, human

TSL 4

Gene TCF12, Length 818 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF12-223	ENST00000561235	CUEDC1	Q9NWM3	386 aa	Predicted RBP	9.23	□□□□□ -0.93
TCF12-223	ENST00000561235	RBM47	A0AV96	593 aa	Known RBP	9.22	□□□□□ -0.93
TCF12-223	ENST00000561235	P4HB	P07237	508 aa	Known RBP	9.22	□□□□□ -0.93
TCF12-223	ENST00000561235	GRN	P28799	593 aa	Known RBP	9.22	□□□□□ -0.93
TCF12-223	ENST00000561235	C8orf34	Q49A92	452 aa		9.22	□□□□□ -0.93
TCF12-223	ENST00000561235	NLRP8	Q86W28	1048 aa		9.22	□□□□□ -0.93
TCF12-223	ENST00000561235	CMTR1	Q8N1G2	835 aa	Known RBP	9.22	□□□□□ -0.93
TCF12-223	ENST00000561235	CCDC155	Q8N6L0	562 aa		9.22	□□□□□ -0.93
TCF12-223	ENST00000561235	PIK3R5	Q8WYR1	880 aa		9.22	□□□□□ -0.93
TCF12-223	ENST00000561235	KIFC2	Q96AC6	838 aa		9.22	□□□□□ -0.93
TCF12-223	ENST00000561235	FAM13B	Q9NYF5	915 aa		9.22	□□□□□ -0.93
TCF12-223	ENST00000561235	RTCB	Q9Y3I0	505 aa	Known RBP	9.22	□□□□□ -0.93
TCF12-223	ENST00000561235	UNCX	A6NJT0	531 aa		9.21	□□□□□ -0.94
TCF12-223	ENST00000561235	PCSK2	P16519	638 aa		9.21	□□□□□ -0.94
TCF12-223	ENST00000561235	USP5	P45974	858 aa		9.21	□□□□□ -0.94
TCF12-223	ENST00000561235	PDE3B	Q13370	1112 aa		9.21	□□□□□ -0.94
TCF12-223	ENST00000561235	DSC3	Q14574	896 aa		9.21	□□□□□ -0.94
TCF12-223	ENST00000561235	TRIP4	Q15650	581 aa	Predicted RBP	9.21	□□□□□ -0.94
TCF12-223	ENST00000561235	EFHC2	Q5JST6	749 aa		9.21	□□□□□ -0.94
TCF12-223	ENST00000561235	FBXO33	Q7Z6M2	555 aa		9.21	□□□□□ -0.94
TCF12-223	ENST00000561235	DMRTB1	Q96MA1	342 aa		9.21	□□□□□ -0.94
TCF12-223	ENST00000561235	ZCCHC2	Q9C0B9	1178 aa	Known RBP	9.21	□□□□□ -0.94
TCF12-223	ENST00000561235	NIF3L1	Q9GZT8	377 aa		9.21	□□□□□ -0.94
TCF12-223	ENST00000561235	ZNF16	P17020	682 aa	Predicted RBP	9.2	□□□□□ -0.94
TCF12-223	ENST00000561235	PLCB3	Q01970	1234 aa		9.2	□□□□□ -0.94
TCF12-223	ENST00000561235	DBN1	Q16643	649 aa		9.2	□□□□□ -0.94
TCF12-223	ENST00000561235	NUCKS1	Q9H1E3	243 aa	Known RBP	9.2	□□□□□ -0.94
TCF12-223	ENST00000561235	BRD7	Q9NPI1	651 aa		9.2	□□□□□ -0.94
TCF12-223	ENST00000561235	KCNMB2	Q9Y691	235 aa		9.2	□□□□□ -0.94
TCF12-223	ENST00000561235	MAPK8	P45983	427 aa		9.19	□□□□□ -0.94
TCF12-223	ENST00000561235	FMR1	Q06787	632 aa	Known RBP eCLIP	9.19	□□□□□ -0.94
TCF12-223	ENST00000561235	EHHADH	Q08426	723 aa		9.19	□□□□□ -0.94
TCF12-223	ENST00000561235	EAPP	Q56P03	285 aa	Predicted RBP	9.19	□□□□□ -0.94
TCF12-223	ENST00000561235	SAMD5	Q5TGI4	173 aa		9.19	□□□□□ -0.94
TCF12-223	ENST00000561235	TTC16	Q8NEE8	873 aa		9.19	□□□□□ -0.94
TCF12-223	ENST00000561235	DCDC2B	A2VCK2	349 aa		9.18	□□□□□ -0.94
TCF12-223	ENST00000561235	ATXN7	O15265	892 aa	Predicted RBP	9.18	□□□□□ -0.94
TCF12-223	ENST00000561235	UBAP2L	Q14157	1087 aa	Known RBP	9.18	□□□□□ -0.94
TCF12-223	ENST00000561235	UBAP1L	F5GYI3	381 aa		9.17	□□□□□ -0.94
TCF12-223	ENST00000561235	SFSWAP	Q12872	951 aa	Known RBP	9.17	□□□□□ -0.94
TCF12-223	ENST00000561235	COL19A1	Q14993	1142 aa		9.17	□□□□□ -0.94
TCF12-223	ENST00000561235	ALKBH8	Q96BT7	664 aa	Known RBP	9.17	□□□□□ -0.94
TCF12-223	ENST00000561235	SETDB2	Q96T68	719 aa		9.17	□□□□□ -0.94
TCF12-223	ENST00000561235	C11orf95	C9JLR9	678 aa	Predicted RBP	9.16	□□□□□ -0.94
TCF12-223	ENST00000561235	KHNYN	O15037	678 aa	Known RBP	9.16	□□□□□ -0.94
TCF12-223	ENST00000561235	RPLP1	P05386	114 aa	Known RBP	9.16	□□□□□ -0.94
TCF12-223	ENST00000561235	EPB42	P16452	691 aa		9.16	□□□□□ -0.94
TCF12-223	ENST00000561235	ITGA6	P23229	1130 aa		9.16	□□□□□ -0.94
TCF12-223	ENST00000561235	ORC1	Q13415	861 aa		9.16	□□□□□ -0.94
TCF12-223	ENST00000561235	LBR	Q14739	615 aa	Known RBP	9.16	□□□□□ -0.94
TCF12-223	ENST00000561235	FIGNL1	Q6PIW4	674 aa		9.16	□□□□□ -0.94
TCF12-223	ENST00000561235	TRIM22	Q8IYM9	498 aa		9.16	□□□□□ -0.94
TCF12-223	ENST00000561235	STRN4	Q9NRL3	753 aa		9.16	□□□□□ -0.94
TCF12-223	ENST00000561235	HCN2	Q9UL51	889 aa		9.16	□□□□□ -0.94
TCF12-223	ENST00000561235	WWC3	Q9ULE0	1092 aa		9.16	□□□□□ -0.94
TCF12-223	ENST00000561235	PCDHGC4	Q9Y5F7	938 aa		9.16	□□□□□ -0.94
TCF12-223	ENST00000561235		H7C1W4	665 aa		9.15	□□□□□ -0.94
TCF12-223	ENST00000561235	XYLB	O75191	536 aa		9.15	□□□□□ -0.94
TCF12-223	ENST00000561235	FAM157B	P0CG42	384 aa		9.15	□□□□□ -0.94
TCF12-223	ENST00000561235	GRIN2C	Q14957	1233 aa		9.15	□□□□□ -0.94
TCF12-223	ENST00000561235	ZNF326	Q5BKZ1	582 aa	Known RBP	9.15	□□□□□ -0.94
TCF12-223	ENST00000561235	ZNF438	Q7Z4V0	828 aa		9.15	□□□□□ -0.94
TCF12-223	ENST00000561235	ZNF837	Q96EG3	531 aa	Predicted RBP	9.15	□□□□□ -0.94
TCF12-223	ENST00000561235	FOXD3	Q9UJU5	478 aa	Predicted RBP	9.15	□□□□□ -0.94
TCF12-223	ENST00000561235	FNDC3A	Q9Y2H6	1198 aa	Known RBP	9.15	□□□□□ -0.94
TCF12-223	ENST00000561235	PNMA6F	A0A0J9YX94	578 aa		9.14	□□□□□ -0.95
TCF12-223	ENST00000561235	EFS	O43281	561 aa		9.14	□□□□□ -0.95
TCF12-223	ENST00000561235	BNIP3L	O60238	219 aa		9.14	□□□□□ -0.95
TCF12-223	ENST00000561235	LDHB	P07195	334 aa	Known RBP	9.14	□□□□□ -0.95
TCF12-223	ENST00000561235	MAPT	P10636	758 aa	Known RBP	9.14	□□□□□ -0.95
TCF12-223	ENST00000561235	RANGAP1	P46060	587 aa	Predicted RBP	9.14	□□□□□ -0.95
TCF12-223	ENST00000561235	TNP2	Q05952	138 aa		9.14	□□□□□ -0.95
TCF12-223	ENST00000561235	GTPBP3	Q969Y2	492 aa	Known RBP	9.14	□□□□□ -0.95
TCF12-223	ENST00000561235	TMEM63C	Q9P1W3	806 aa		9.14	□□□□□ -0.95
TCF12-223	ENST00000561235	KCNH4	Q9UQ05	1017 aa		9.14	□□□□□ -0.95
TCF12-223	ENST00000561235		E9PSI1	815 aa		9.13	□□□□□ -0.95
TCF12-223	ENST00000561235	TNFRSF21	O75509	655 aa		9.13	□□□□□ -0.95
TCF12-223	ENST00000561235	ABHD17A	Q96GS6	310 aa		9.13	□□□□□ -0.95
TCF12-223	ENST00000561235	ELP3	Q9H9T3	547 aa		9.13	□□□□□ -0.95
TCF12-223	ENST00000561235	RNF19A	Q9NV58	838 aa		9.13	□□□□□ -0.95
TCF12-223	ENST00000561235	PPFIA3	O75145	1194 aa		9.12	□□□□□ -0.95
TCF12-223	ENST00000561235	WFS1	O76024	890 aa		9.12	□□□□□ -0.95
TCF12-223	ENST00000561235	KCNQ4	P56696	695 aa		9.12	□□□□□ -0.95
TCF12-223	ENST00000561235	ENOX2	Q16206	610 aa	Known RBP	9.12	□□□□□ -0.95
TCF12-223	ENST00000561235	PDE12	Q6L8Q7	609 aa	Known RBP	9.12	□□□□□ -0.95
TCF12-223	ENST00000561235	XKR5	Q6UX68	686 aa		9.12	□□□□□ -0.95
TCF12-223	ENST00000561235	KRT25	Q7Z3Z0	450 aa		9.12	□□□□□ -0.95
TCF12-223	ENST00000561235	MRRF	Q96E11	262 aa	Known RBP	9.12	□□□□□ -0.95
TCF12-223	ENST00000561235	CSRNP1	Q96S65	589 aa		9.12	□□□□□ -0.95
TCF12-223	ENST00000561235	NDFIP2	Q9NV92	336 aa		9.12	□□□□□ -0.95
TCF12-223	ENST00000561235	KIAA1522	Q9P206	1035 aa	Predicted RBP	9.12	□□□□□ -0.95
TCF12-223	ENST00000561235	GPR25	O00155	361 aa		9.11	□□□□□ -0.95
TCF12-223	ENST00000561235	EIF1AY	O14602	144 aa	Known RBP	9.11	□□□□□ -0.95
TCF12-223	ENST00000561235	SASH3	O75995	380 aa		9.11	□□□□□ -0.95
TCF12-223	ENST00000561235	CD33	P20138	364 aa		9.11	□□□□□ -0.95
TCF12-223	ENST00000561235	CDC14C	A4D256	554 aa		9.1	□□□□□ -0.95
TCF12-223	ENST00000561235	EGFR	P00533	1210 aa		9.1	□□□□□ -0.95
TCF12-223	ENST00000561235	USPL1	Q5W0Q7	1092 aa		9.1	□□□□□ -0.95
TCF12-223	ENST00000561235	NLRP13	Q86W25	1043 aa		9.1	□□□□□ -0.95
TCF12-223	ENST00000561235	VWA5B2	Q8N398	1253 aa		9.1	□□□□□ -0.95

Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms