RNA–Protein interactions for RNA: ENST00000561206.1

USP8-216, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 2

Gene USP8, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-216ENST00000561206 RHPN1Q8TCX5 695 aa8.74□□□□□ -1.01
USP8-216ENST00000561206 BHMTQ93088 406 aa8.74□□□□□ -1.01
USP8-216ENST00000561206 SERTM1A2A2V5 107 aa8.73□□□□□ -1.01
USP8-216ENST00000561206 GP2P55259 537 aaKnown RBP8.73□□□□□ -1.01
USP8-216ENST00000561206 GRIK5Q16478 980 aa8.73□□□□□ -1.01
USP8-216ENST00000561206 SLC9A9Q8IVB4 645 aa8.73□□□□□ -1.01
USP8-216ENST00000561206 ZNF358Q9NW07 568 aa8.73□□□□□ -1.01
USP8-216ENST00000561206 RGS9O75916 674 aaPredicted RBP8.72□□□□□ -1.01
USP8-216ENST00000561206 DNAJB12Q9NXW2 375 aaKnown RBP8.72□□□□□ -1.01
USP8-216ENST00000561206 TBC1D2BQ9UPU7 963 aa8.72□□□□□ -1.01
USP8-216ENST00000561206 MED26O95402 600 aa8.71□□□□□ -1.02
USP8-216ENST00000561206 ZNF232Q9UNY5 417 aa8.71□□□□□ -1.02
USP8-216ENST00000561206 SH3PXD2AQ5TCZ1 1133 aa8.7□□□□□ -1.02
USP8-216ENST00000561206 HSH2DQ96JZ2 352 aa8.7□□□□□ -1.02
USP8-216ENST00000561206 FRRS1LQ9P0K9 344 aa8.7□□□□□ -1.02
USP8-216ENST00000561206 SFI1A8K8P3 1242 aa8.69□□□□□ -1.02
USP8-216ENST00000561206 TMEM130Q8N3G9 435 aa8.69□□□□□ -1.02
USP8-216ENST00000561206 DLL1O00548 723 aa8.68□□□□□ -1.02
USP8-216ENST00000561206 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.68□□□□□ -1.02
USP8-216ENST00000561206 ZNF280CQ8ND82 737 aa8.68□□□□□ -1.02
USP8-216ENST00000561206 TTC9Q92623 222 aa8.68□□□□□ -1.02
USP8-216ENST00000561206 SUSD3Q96L08 255 aa8.68□□□□□ -1.02
USP8-216ENST00000561206 GSC2O15499 205 aa8.67□□□□□ -1.02
USP8-216ENST00000561206 JAG1P78504 1218 aa8.67□□□□□ -1.02
USP8-216ENST00000561206 TBC1D8BQ0IIM8 1120 aa8.67□□□□□ -1.02
USP8-216ENST00000561206 Q6ZS46 218 aa8.67□□□□□ -1.02
USP8-216ENST00000561206 GSX2Q9BZM3 304 aa8.67□□□□□ -1.02
USP8-216ENST00000561206 LZTS3O60299 673 aaPredicted RBP8.66□□□□□ -1.02
USP8-216ENST00000561206 DEAF1O75398 565 aaPredicted RBP8.66□□□□□ -1.02
USP8-216ENST00000561206 SPINK2P20155 84 aa8.66□□□□□ -1.02
USP8-216ENST00000561206 BRPF1P55201 1214 aaPredicted RBP8.66□□□□□ -1.02
USP8-216ENST00000561206 PCSK7Q16549 785 aa8.66□□□□□ -1.02
USP8-216ENST00000561206 LPIN3Q9BQK8 851 aa8.66□□□□□ -1.02
USP8-216ENST00000561206 AKTIPQ9H8T0 292 aa8.66□□□□□ -1.02
USP8-216ENST00000561206 PSMA6P60900 246 aaKnown RBP8.65□□□□□ -1.02
USP8-216ENST00000561206 GTF2IP78347 998 aa8.65□□□□□ -1.02
USP8-216ENST00000561206 PRM3Q9NNZ6 103 aa8.65□□□□□ -1.02
USP8-216ENST00000561206 NOD1Q9Y239 953 aa8.65□□□□□ -1.02
USP8-216ENST00000561206 SOX11P35716 441 aa8.64□□□□□ -1.03
USP8-216ENST00000561206 VAC14Q08AM6 782 aa8.64□□□□□ -1.03
USP8-216ENST00000561206 EML3Q32P44 896 aa8.64□□□□□ -1.03
USP8-216ENST00000561206 TBCELQ5QJ74 424 aa8.64□□□□□ -1.03
USP8-216ENST00000561206 WFDC8Q8IUA0 241 aa8.64□□□□□ -1.03
USP8-216ENST00000561206 TNS4Q8IZW8 715 aa8.64□□□□□ -1.03
USP8-216ENST00000561206 PHACTR1Q9C0D0 580 aa8.64□□□□□ -1.03
USP8-216ENST00000561206 IGFLR1Q9H665 355 aa8.64□□□□□ -1.03
USP8-216ENST00000561206 ADAMTS4O75173 837 aa8.63□□□□□ -1.03
USP8-216ENST00000561206 BTLAQ7Z6A9 289 aa8.63□□□□□ -1.03
USP8-216ENST00000561206 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.63□□□□□ -1.03
USP8-216ENST00000561206 MAP3K6O95382 1288 aa8.62□□□□□ -1.03
USP8-216ENST00000561206 IGLV1-40P01703 118 aa8.62□□□□□ -1.03
USP8-216ENST00000561206 FAM35AQ86V20 835 aa8.62□□□□□ -1.03
USP8-216ENST00000561206 MRPL18Q9H0U6 180 aaKnown RBP8.62□□□□□ -1.03
USP8-216ENST00000561206 F8W735 103 aaPredicted RBP8.61□□□□□ -1.03
USP8-216ENST00000561206 PTCD1O75127 700 aaKnown RBP8.61□□□□□ -1.03
USP8-216ENST00000561206 TGFB1P01137 390 aa8.61□□□□□ -1.03
USP8-216ENST00000561206 HIF1AQ16665 826 aa8.61□□□□□ -1.03
USP8-216ENST00000561206 PERM1Q5SV97 790 aa8.61□□□□□ -1.03
USP8-216ENST00000561206 INTS5Q6P9B9 1019 aaKnown RBP8.61□□□□□ -1.03
USP8-216ENST00000561206 RAXQ9Y2V3 346 aa8.61□□□□□ -1.03
USP8-216ENST00000561206 CCINQ13939 588 aa8.6□□□□□ -1.03
USP8-216ENST00000561206 IER5Q5VY09 327 aa8.6□□□□□ -1.03
USP8-216ENST00000561206 DTX1Q86Y01 620 aa8.6□□□□□ -1.03
USP8-216ENST00000561206 ZDHHC13Q8IUH4 622 aa8.6□□□□□ -1.03
USP8-216ENST00000561206 HCN4Q9Y3Q4 1203 aa8.6□□□□□ -1.03
USP8-216ENST00000561206 NFKB1P19838 968 aa8.59□□□□□ -1.03
USP8-216ENST00000561206 PLAURQ03405 335 aa8.59□□□□□ -1.03
USP8-216ENST00000561206 WASHC4Q2M389 1173 aa8.59□□□□□ -1.03
USP8-216ENST00000561206 NFATC2IPQ8NCF5 419 aa8.59□□□□□ -1.03
USP8-216ENST00000561206 TRPM4Q8TD43 1214 aa8.59□□□□□ -1.03
USP8-216ENST00000561206 PIK3CDO00329 1044 aa8.58□□□□□ -1.04
USP8-216ENST00000561206 SEMA3FQ13275 785 aa8.58□□□□□ -1.04
USP8-216ENST00000561206 SRA1Q9HD15 236 aaKnown RBP8.58□□□□□ -1.04
USP8-216ENST00000561206 ADGRE2Q9UHX3 823 aa8.58□□□□□ -1.04
USP8-216ENST00000561206 CHMP3Q9Y3E7 222 aa8.58□□□□□ -1.04
USP8-216ENST00000561206 ALX3O95076 343 aa8.57□□□□□ -1.04
USP8-216ENST00000561206 CPB1P15086 417 aa8.57□□□□□ -1.04
USP8-216ENST00000561206 PSME1Q06323 249 aa8.57□□□□□ -1.04
USP8-216ENST00000561206 IL27Q8NEV9 243 aa8.57□□□□□ -1.04
USP8-216ENST00000561206 PNMA5Q96PV4 448 aa8.57□□□□□ -1.04
USP8-216ENST00000561206 TSPAN10Q9H1Z9 355 aaPredicted RBP8.57□□□□□ -1.04
USP8-216ENST00000561206 ZBTB42B2RXF5 422 aa8.56□□□□□ -1.04
USP8-216ENST00000561206 M0R2N6 131 aa8.56□□□□□ -1.04
USP8-216ENST00000561206 STAG2Q8N3U4 1231 aa8.56□□□□□ -1.04
USP8-216ENST00000561206 GRIK1P39086 918 aa8.55□□□□□ -1.04
USP8-216ENST00000561206 ELMSAN1Q6PJG2 1045 aa8.55□□□□□ -1.04
USP8-216ENST00000561206 DCAF11Q8TEB1 546 aa8.55□□□□□ -1.04
USP8-216ENST00000561206 KRTAP4-11Q9BYQ6 195 aa8.55□□□□□ -1.04
USP8-216ENST00000561206 C11orf16Q9NQ32 467 aa8.55□□□□□ -1.04
USP8-216ENST00000561206 GPLD1P80108 840 aa8.54□□□□□ -1.04
USP8-216ENST00000561206 BCANQ96GW7 911 aa8.54□□□□□ -1.04
USP8-216ENST00000561206 STOML1Q9UBI4 398 aa8.54□□□□□ -1.04
USP8-216ENST00000561206 DMGDHQ9UI17 866 aaKnown RBP8.54□□□□□ -1.04
USP8-216ENST00000561206 GRNP28799 593 aaKnown RBP8.53□□□□□ -1.04
USP8-216ENST00000561206 NCOA4Q13772 614 aa8.53□□□□□ -1.04
USP8-216ENST00000561206 MAP4K3Q8IVH8 894 aa8.53□□□□□ -1.04
USP8-216ENST00000561206 ALDH16A1Q8IZ83 802 aa8.53□□□□□ -1.04
USP8-216ENST00000561206 PRR19A6NJB7 356 aa8.52□□□□□ -1.05
USP8-216ENST00000561206 ZBTB7BO15156 539 aaPredicted RBP8.52□□□□□ -1.05
USP8-216ENST00000561206 WNT11O96014 354 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms