RNA–Protein interactions for RNA: ENST00000560909.2

ZEB1-220, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 4

Gene ZEB1, Length 564 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-220ENST00000560909 EIF4A2Q14240 407 aaKnown RBP7.33□□□□□ -1.24
ZEB1-220ENST00000560909 RNFT1Q5M7Z0 435 aa7.33□□□□□ -1.24
ZEB1-220ENST00000560909 CFAP53Q96M91 514 aa7.33□□□□□ -1.24
ZEB1-220ENST00000560909 MRS2Q9HD23 443 aa7.33□□□□□ -1.24
ZEB1-220ENST00000560909 COL18A1P39060 1754 aa7.33□□□□□ -1.24
ZEB1-220ENST00000560909 PEAK1Q9H792 1746 aa7.32□□□□□ -1.24
ZEB1-220ENST00000560909 SHPRHQ149N8 1683 aa7.32□□□□□ -1.24
ZEB1-220ENST00000560909 DIAPH1O60610 1272 aaKnown RBP7.32□□□□□ -1.24
ZEB1-220ENST00000560909 AMPHP49418 695 aa7.32□□□□□ -1.24
ZEB1-220ENST00000560909 ZC3H6P61129 1189 aaKnown RBP7.32□□□□□ -1.24
ZEB1-220ENST00000560909 CNGB1Q14028 1251 aaPredicted RBP7.32□□□□□ -1.24
ZEB1-220ENST00000560909 FNBP4Q8N3X1 1017 aaPredicted RBP7.32□□□□□ -1.24
ZEB1-220ENST00000560909 NPDC1Q9NQX5 325 aaPredicted RBP7.32□□□□□ -1.24
ZEB1-220ENST00000560909 KDRP35968 1356 aa7.32□□□□□ -1.24
ZEB1-220ENST00000560909 IGSF1Q8N6C5 1336 aa7.31□□□□□ -1.24
ZEB1-220ENST00000560909 PRDM11Q9NQV5 511 aa7.31□□□□□ -1.24
ZEB1-220ENST00000560909 NUDCQ9Y266 331 aa7.31□□□□□ -1.24
ZEB1-220ENST00000560909 LMO7Q8WWI1 1683 aa7.31□□□□□ -1.24
ZEB1-220ENST00000560909 CAMTA1Q9Y6Y1 1673 aa7.31□□□□□ -1.24
ZEB1-220ENST00000560909 SLIT2O94813 1529 aa7.31□□□□□ -1.24
ZEB1-220ENST00000560909 PLEKHG2Q9H7P9 1386 aa7.31□□□□□ -1.24
ZEB1-220ENST00000560909 ABCA3Q99758 1704 aa7.3□□□□□ -1.24
ZEB1-220ENST00000560909 MAP2P11137 1827 aaKnown RBP7.3□□□□□ -1.24
ZEB1-220ENST00000560909 FCHSD2O94868 740 aa7.3□□□□□ -1.24
ZEB1-220ENST00000560909 FECHP22830 423 aa7.3□□□□□ -1.24
ZEB1-220ENST00000560909 WNT7BP56706 349 aa7.3□□□□□ -1.24
ZEB1-220ENST00000560909 CHRNA2Q15822 529 aa7.3□□□□□ -1.24
ZEB1-220ENST00000560909 PLEKHF1Q96S99 279 aa7.3□□□□□ -1.24
ZEB1-220ENST00000560909 LRP6O75581 1613 aa7.3□□□□□ -1.24
ZEB1-220ENST00000560909 WDR17Q8IZU2 1322 aa7.29□□□□□ -1.24
ZEB1-220ENST00000560909 SPDYE16A6NNV3 312 aaPredicted RBP7.29□□□□□ -1.24
ZEB1-220ENST00000560909 PHF20L1A8MW92 1017 aa7.29□□□□□ -1.24
ZEB1-220ENST00000560909 PPM1GO15355 546 aaPredicted RBP7.29□□□□□ -1.24
ZEB1-220ENST00000560909 MORN1Q5T089 497 aa7.29□□□□□ -1.24
ZEB1-220ENST00000560909 NBPF6Q5VWK0 638 aa7.29□□□□□ -1.24
ZEB1-220ENST00000560909 PAXIP1Q6ZW49 1069 aaPredicted RBP7.29□□□□□ -1.24
ZEB1-220ENST00000560909 ANKRD24Q8TF21 1146 aa7.29□□□□□ -1.24
ZEB1-220ENST00000560909 NBPF4Q96M43 638 aa7.29□□□□□ -1.24
ZEB1-220ENST00000560909 CARD10Q9BWT7 1032 aa7.29□□□□□ -1.24
ZEB1-220ENST00000560909 RSPH6AQ9H0K4 717 aa7.29□□□□□ -1.24
ZEB1-220ENST00000560909 COL5A2P05997 1499 aaPredicted RBP7.29□□□□□ -1.24
ZEB1-220ENST00000560909 BCL9LQ86UU0 1499 aa7.29□□□□□ -1.24
ZEB1-220ENST00000560909 OSBPP22059 807 aa7.28□□□□□ -1.24
ZEB1-220ENST00000560909 NGEFQ8N5V2 710 aa7.28□□□□□ -1.24
ZEB1-220ENST00000560909 RGPD1P0DJD0 1748 aa7.27□□□□□ -1.25
ZEB1-220ENST00000560909 RCCD1A6NED2 376 aa7.27□□□□□ -1.25
ZEB1-220ENST00000560909 SIAH2O43255 324 aa7.27□□□□□ -1.25
ZEB1-220ENST00000560909 ADAMTS2O95450 1211 aa7.27□□□□□ -1.25
ZEB1-220ENST00000560909 U2AF1L5P0DN76 240 aaPredicted RBP7.27□□□□□ -1.25
ZEB1-220ENST00000560909 HAP1P54257 671 aaPredicted RBP7.27□□□□□ -1.25
ZEB1-220ENST00000560909 U2AF1Q01081 240 aaKnown RBP eCLIP7.27□□□□□ -1.25
ZEB1-220ENST00000560909 MSS51Q4VC12 460 aa7.27□□□□□ -1.25
ZEB1-220ENST00000560909 UNC5CLQ8IV45 518 aa7.27□□□□□ -1.25
ZEB1-220ENST00000560909 CFAP44Q96MT7 982 aa7.27□□□□□ -1.25
ZEB1-220ENST00000560909 PNNQ9H307 717 aaKnown RBP7.27□□□□□ -1.25
ZEB1-220ENST00000560909 BTG4Q9NY30 223 aa7.27□□□□□ -1.25
ZEB1-220ENST00000560909 COL14A1Q05707 1796 aaKnown RBP7.27□□□□□ -1.25
ZEB1-220ENST00000560909 CNTNAP5Q8WYK1 1306 aa7.27□□□□□ -1.25
ZEB1-220ENST00000560909 NUTM2BA6NNL0 878 aaPredicted RBP7.26□□□□□ -1.25
ZEB1-220ENST00000560909 NUTM2EB1AL46 878 aaPredicted RBP7.26□□□□□ -1.25
ZEB1-220ENST00000560909 WDR43Q15061 677 aaKnown RBP eCLIP7.26□□□□□ -1.25
ZEB1-220ENST00000560909 VPS72Q15906 364 aa7.26□□□□□ -1.25
ZEB1-220ENST00000560909 SULT6B1Q6IMI4 303 aa7.26□□□□□ -1.25
ZEB1-220ENST00000560909 LARP1Q6PKG0 1096 aaKnown RBP7.26□□□□□ -1.25
ZEB1-220ENST00000560909 AEBP1Q8IUX7 1158 aa7.26□□□□□ -1.25
ZEB1-220ENST00000560909 NUTM2AQ8IVF1 878 aaPredicted RBP7.26□□□□□ -1.25
ZEB1-220ENST00000560909 RBM46Q8TBY0 533 aaKnown RBP7.26□□□□□ -1.25
ZEB1-220ENST00000560909 RUNDC1Q96C34 613 aa7.26□□□□□ -1.25
ZEB1-220ENST00000560909 THRAP3Q9Y2W1 955 aaKnown RBP7.26□□□□□ -1.25
ZEB1-220ENST00000560909 CRB1P82279 1406 aa7.26□□□□□ -1.25
ZEB1-220ENST00000560909 SPATA31A5Q5VU36 1347 aa7.26□□□□□ -1.25
ZEB1-220ENST00000560909 SPATA31A7Q8IWB4 1347 aa7.26□□□□□ -1.25
ZEB1-220ENST00000560909 LTN1O94822 1766 aa7.25□□□□□ -1.25
ZEB1-220ENST00000560909 U2SURPO15042 1029 aaKnown RBP7.25□□□□□ -1.25
ZEB1-220ENST00000560909 CCDC27Q2M243 656 aa7.25□□□□□ -1.25
ZEB1-220ENST00000560909 BARGINQ6ZT62 677 aa7.25□□□□□ -1.25
ZEB1-220ENST00000560909 FAM9BQ8IZU0 186 aa7.25□□□□□ -1.25
ZEB1-220ENST00000560909 NGLY1Q96IV0 654 aa7.25□□□□□ -1.25
ZEB1-220ENST00000560909 PHACTR3Q96KR7 559 aa7.25□□□□□ -1.25
ZEB1-220ENST00000560909 KRTAP17-1Q9BYP8 105 aa7.25□□□□□ -1.25
ZEB1-220ENST00000560909 DISP2A7MBM2 1401 aa7.25□□□□□ -1.25
ZEB1-220ENST00000560909 SPATA31A1Q5TZJ5 1347 aa7.25□□□□□ -1.25
ZEB1-220ENST00000560909 NWD2Q9ULI1 1742 aa7.24□□□□□ -1.25
ZEB1-220ENST00000560909 COBLO75128 1261 aa7.24□□□□□ -1.25
ZEB1-220ENST00000560909 PRKAR2BP31323 418 aa7.24□□□□□ -1.25
ZEB1-220ENST00000560909 EVA1CP58658 441 aa7.24□□□□□ -1.25
ZEB1-220ENST00000560909 MAP3K10Q02779 954 aa7.24□□□□□ -1.25
ZEB1-220ENST00000560909 LYPD4Q6UWN0 246 aa7.24□□□□□ -1.25
ZEB1-220ENST00000560909 LTV1Q96GA3 475 aaPredicted RBP7.24□□□□□ -1.25
ZEB1-220ENST00000560909 CDCA7Q9BWT1 371 aaPredicted RBP7.24□□□□□ -1.25
ZEB1-220ENST00000560909 NLRP2Q9NX02 1062 aa7.24□□□□□ -1.25
ZEB1-220ENST00000560909 SLC27A5Q9Y2P5 690 aa7.24□□□□□ -1.25
ZEB1-220ENST00000560909 ATRNO75882 1429 aa7.24□□□□□ -1.25
ZEB1-220ENST00000560909 ZNF521Q96K83 1311 aa7.24□□□□□ -1.25
ZEB1-220ENST00000560909 FAM208AQ9UK61 1670 aaKnown RBP7.23□□□□□ -1.25
ZEB1-220ENST00000560909 ZBTB7CA1YPR0 619 aa7.23□□□□□ -1.25
ZEB1-220ENST00000560909 HMOX1P09601 288 aa7.23□□□□□ -1.25
ZEB1-220ENST00000560909 TMPOP42166 694 aaKnown RBP7.23□□□□□ -1.25
ZEB1-220ENST00000560909 NFE2L2Q16236 605 aa7.23□□□□□ -1.25
ZEB1-220ENST00000560909 AMOTQ4VCS5 1084 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms