RNA–Protein interactions for RNA: ENST00000560845.1

CPNE6-218, Transcript of copine 6, humanhuman

TSL 5

Gene CPNE6, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-218ENST00000560845 PTPRCP08575 1304 aa10.22□□□□□ -0.77
CPNE6-218ENST00000560845 TIAM2Q8IVF5 1701 aa10.21□□□□□ -0.77
CPNE6-218ENST00000560845 AFDNP55196 1824 aaKnown RBP10.21□□□□□ -0.77
CPNE6-218ENST00000560845 BICDL1Q6ZP65 573 aa10.21□□□□□ -0.77
CPNE6-218ENST00000560845 ITPRIPQ8IWB1 547 aa10.21□□□□□ -0.77
CPNE6-218ENST00000560845 NECTIN2Q92692 538 aa10.21□□□□□ -0.77
CPNE6-218ENST00000560845 LAMB4A4D0S4 1761 aa10.2□□□□□ -0.78
CPNE6-218ENST00000560845 POTECB2RU33 542 aa10.2□□□□□ -0.78
CPNE6-218ENST00000560845 STARD3NLO95772 234 aa10.2□□□□□ -0.78
CPNE6-218ENST00000560845 SLC4A2P04920 1241 aa10.2□□□□□ -0.78
CPNE6-218ENST00000560845 EIF2S2P20042 333 aaKnown RBP10.2□□□□□ -0.78
CPNE6-218ENST00000560845 EIF5P55010 431 aaKnown RBP10.2□□□□□ -0.78
CPNE6-218ENST00000560845 UBR2Q8IWV8 1755 aa10.2□□□□□ -0.78
CPNE6-218ENST00000560845 TMEM57Q8N5G2 664 aa10.2□□□□□ -0.78
CPNE6-218ENST00000560845 ZNF496Q96IT1 587 aaPredicted RBP10.2□□□□□ -0.78
CPNE6-218ENST00000560845 FMNL2Q96PY5 1086 aa10.2□□□□□ -0.78
CPNE6-218ENST00000560845 A0A087WZG4 1122 aa10.19□□□□□ -0.78
CPNE6-218ENST00000560845 AAMPQ13685 434 aa10.19□□□□□ -0.78
CPNE6-218ENST00000560845 TBC1D9BQ66K14 1250 aa10.19□□□□□ -0.78
CPNE6-218ENST00000560845 ZNF622Q969S3 477 aaKnown RBP eCLIP10.19□□□□□ -0.78
CPNE6-218ENST00000560845 CHPF2Q9P2E5 772 aa10.19□□□□□ -0.78
CPNE6-218ENST00000560845 DDX19BQ9UMR2 479 aa10.19□□□□□ -0.78
CPNE6-218ENST00000560845 PDZRN3Q9UPQ7 1066 aa10.19□□□□□ -0.78
CPNE6-218ENST00000560845 C21orf2O43822 256 aa10.18□□□□□ -0.78
CPNE6-218ENST00000560845 SNRPA1P09661 255 aaKnown RBP10.18□□□□□ -0.78
CPNE6-218ENST00000560845 PDE6BP35913 854 aa10.18□□□□□ -0.78
CPNE6-218ENST00000560845 FLIIQ13045 1269 aa10.18□□□□□ -0.78
CPNE6-218ENST00000560845 ERFEQ4G0M1 354 aa10.18□□□□□ -0.78
CPNE6-218ENST00000560845 PRR5LQ6MZQ0 368 aa10.18□□□□□ -0.78
CPNE6-218ENST00000560845 DPY19L2Q6NUT2 758 aa10.18□□□□□ -0.78
CPNE6-218ENST00000560845 G2E3Q7L622 706 aa10.18□□□□□ -0.78
CPNE6-218ENST00000560845 BRIP1Q9BX63 1249 aa10.18□□□□□ -0.78
CPNE6-218ENST00000560845 ZNF219Q9P2Y4 722 aaPredicted RBP10.18□□□□□ -0.78
CPNE6-218ENST00000560845 SCN7AQ01118 1682 aa10.18□□□□□ -0.78
CPNE6-218ENST00000560845 LTBP3Q9NS15 1303 aa10.17□□□□□ -0.78
CPNE6-218ENST00000560845 COL11A2P13942 1736 aaPredicted RBP10.17□□□□□ -0.78
CPNE6-218ENST00000560845 PRAMEF22A3QJZ6 481 aa10.17□□□□□ -0.78
CPNE6-218ENST00000560845 FKBP5Q13451 457 aaPredicted RBP10.17□□□□□ -0.78
CPNE6-218ENST00000560845 CCDC24Q8N4L8 307 aa10.17□□□□□ -0.78
CPNE6-218ENST00000560845 TAOK3Q9H2K8 898 aa10.17□□□□□ -0.78
CPNE6-218ENST00000560845 CHMP4BQ9H444 224 aaKnown RBP10.17□□□□□ -0.78
CPNE6-218ENST00000560845 DBF4Q9UBU7 674 aaPredicted RBP10.17□□□□□ -0.78
CPNE6-218ENST00000560845 ZNF330Q9Y3S2 320 aaPredicted RBP10.17□□□□□ -0.78
CPNE6-218ENST00000560845 CHADLQ6NUI6 762 aa10.16□□□□□ -0.78
CPNE6-218ENST00000560845 CNBD1Q8NA66 436 aa10.16□□□□□ -0.78
CPNE6-218ENST00000560845 CREBZFQ9NS37 354 aa10.16□□□□□ -0.78
CPNE6-218ENST00000560845 TBC1D2BQ9UPU7 963 aa10.16□□□□□ -0.78
CPNE6-218ENST00000560845 ANKRD31Q8N7Z5 1873 aa10.16□□□□□ -0.78
CPNE6-218ENST00000560845 ERBB4Q15303 1308 aa10.15□□□□□ -0.78
CPNE6-218ENST00000560845 POTEIP0CG38 1075 aa10.15□□□□□ -0.78
CPNE6-218ENST00000560845 POTEJP0CG39 1038 aa10.15□□□□□ -0.78
CPNE6-218ENST00000560845 IL6STP40189 918 aaPredicted RBP10.15□□□□□ -0.78
CPNE6-218ENST00000560845 INTS3Q68E01 1043 aaKnown RBP10.15□□□□□ -0.78
CPNE6-218ENST00000560845 STYK1Q6J9G0 422 aa10.15□□□□□ -0.78
CPNE6-218ENST00000560845 PRPF40BQ6NWY9 871 aaKnown RBP10.15□□□□□ -0.78
CPNE6-218ENST00000560845 CNKSR1Q969H4 720 aa10.15□□□□□ -0.78
CPNE6-218ENST00000560845 TEX13AQ9BXU3 409 aaPredicted RBP10.15□□□□□ -0.78
CPNE6-218ENST00000560845 DDX21Q9NR30 783 aaKnown RBP eCLIP10.15□□□□□ -0.78
CPNE6-218ENST00000560845 HYPKQ9NX55 129 aa10.15□□□□□ -0.78
CPNE6-218ENST00000560845 MKRN1Q9UHC7 482 aaKnown RBP10.15□□□□□ -0.78
CPNE6-218ENST00000560845 F6X3S4 739 aa10.14□□□□□ -0.79
CPNE6-218ENST00000560845 NPHP1O15259 732 aa10.14□□□□□ -0.79
CPNE6-218ENST00000560845 DDNO94850 711 aaPredicted RBP10.14□□□□□ -0.79
CPNE6-218ENST00000560845 CAMTA2O94983 1202 aa10.14□□□□□ -0.79
CPNE6-218ENST00000560845 ANXA1P04083 346 aa10.14□□□□□ -0.79
CPNE6-218ENST00000560845 SRGNP10124 158 aa10.14□□□□□ -0.79
CPNE6-218ENST00000560845 CCT4P50991 539 aaKnown RBP10.14□□□□□ -0.79
CPNE6-218ENST00000560845 ST5P78524 1137 aa10.14□□□□□ -0.79
CPNE6-218ENST00000560845 PROSER3Q2NL68 480 aa10.14□□□□□ -0.79
CPNE6-218ENST00000560845 SOGA3Q5TF21 947 aa10.14□□□□□ -0.79
CPNE6-218ENST00000560845 SETDB2Q96T68 719 aa10.14□□□□□ -0.79
CPNE6-218ENST00000560845 PHAXQ9H814 394 aaKnown RBP10.14□□□□□ -0.79
CPNE6-218ENST00000560845 FER1L6Q2WGJ9 1857 aa10.14□□□□□ -0.79
CPNE6-218ENST00000560845 CNTNAP1P78357 1384 aa10.14□□□□□ -0.79
CPNE6-218ENST00000560845 IQCA1LA6NCM1 817 aa10.13□□□□□ -0.79
CPNE6-218ENST00000560845 A1BGP04217 495 aa10.13□□□□□ -0.79
CPNE6-218ENST00000560845 SLC4A10Q6U841 1118 aa10.13□□□□□ -0.79
CPNE6-218ENST00000560845 CENPQQ7L2Z9 268 aaPredicted RBP10.13□□□□□ -0.79
CPNE6-218ENST00000560845 NPM2Q86SE8 214 aaKnown RBP10.13□□□□□ -0.79
CPNE6-218ENST00000560845 MASTLQ96GX5 879 aa10.13□□□□□ -0.79
CPNE6-218ENST00000560845 ZBTB40Q9NUA8 1239 aa10.13□□□□□ -0.79
CPNE6-218ENST00000560845 USP16Q9Y5T5 823 aa10.13□□□□□ -0.79
CPNE6-218ENST00000560845 CACNA1FO60840 1977 aa10.13□□□□□ -0.79
CPNE6-218ENST00000560845 CCDC88AQ3V6T2 1871 aa10.13□□□□□ -0.79
CPNE6-218ENST00000560845 DDX58O95786 925 aaKnown RBP10.12□□□□□ -0.79
CPNE6-218ENST00000560845 PDIA6Q15084 440 aa10.12□□□□□ -0.79
CPNE6-218ENST00000560845 LDHDQ86WU2 507 aa10.12□□□□□ -0.79
CPNE6-218ENST00000560845 DZIP3Q86Y13 1208 aaKnown RBP10.12□□□□□ -0.79
CPNE6-218ENST00000560845 DNAAF4Q8WXU2 420 aa10.12□□□□□ -0.79
CPNE6-218ENST00000560845 L3MBTL3Q96JM7 780 aaPredicted RBP10.12□□□□□ -0.79
CPNE6-218ENST00000560845 DICER1Q9UPY3 1922 aaKnown RBP10.11□□□□□ -0.79
CPNE6-218ENST00000560845 PASKQ96RG2 1323 aa10.11□□□□□ -0.79
CPNE6-218ENST00000560845 ZBTB7BO15156 539 aaPredicted RBP10.11□□□□□ -0.79
CPNE6-218ENST00000560845 FOXN1O15353 648 aa10.11□□□□□ -0.79
CPNE6-218ENST00000560845 MYL6BP14649 208 aa10.11□□□□□ -0.79
CPNE6-218ENST00000560845 CCDC93Q567U6 631 aa10.11□□□□□ -0.79
CPNE6-218ENST00000560845 XAGE3Q8WTP9 111 aa10.11□□□□□ -0.79
CPNE6-218ENST00000560845 ANP32EQ9BTT0 268 aa10.11□□□□□ -0.79
CPNE6-218ENST00000560845 TAF1DQ9H5J8 278 aaPredicted RBP10.11□□□□□ -0.79
CPNE6-218ENST00000560845 PCDHB15Q9Y5E8 787 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms