RNA–Protein interactions for RNA: ENST00000560587.1

ZNF280D-215, Transcript of zinc finger protein 280D, human

TSL 1 (best)

Gene ZNF280D, Length 1,441 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ZNF280D-215	ENST00000560587	RASSF7	Q02833	373 aa		32	■■■□□ 2.71
ZNF280D-215	ENST00000560587	GOLGA2	Q08379	1002 aa		32	■■■□□ 2.71
ZNF280D-215	ENST00000560587	TWISTNB	Q3B726	338 aa	Predicted RBP	32	■■■□□ 2.71
ZNF280D-215	ENST00000560587	CRY2	Q49AN0	593 aa		32	■■■□□ 2.71
ZNF280D-215	ENST00000560587	PHAX	Q9H814	394 aa	Known RBP	32	■■■□□ 2.71
ZNF280D-215	ENST00000560587	RNF181	Q9P0P0	153 aa		32	■■■□□ 2.71
ZNF280D-215	ENST00000560587	SOGA3	Q5TF21	947 aa		31.99	■■■□□ 2.71
ZNF280D-215	ENST00000560587	GPBP1L1	Q9HC44	474 aa	Predicted RBP	31.99	■■■□□ 2.71
ZNF280D-215	ENST00000560587	CCER2	I3L3R5	266 aa		31.98	■■■□□ 2.71
ZNF280D-215	ENST00000560587	ZNF526	Q8TF50	670 aa	Predicted RBP	31.98	■■■□□ 2.71
ZNF280D-215	ENST00000560587	STK31	Q9BXU1	1019 aa		31.98	■■■□□ 2.71
ZNF280D-215	ENST00000560587	FER1L6	Q2WGJ9	1857 aa		31.97	■■■□□ 2.71
ZNF280D-215	ENST00000560587	ALDH1B1	P30837	517 aa		31.97	■■■□□ 2.71
ZNF280D-215	ENST00000560587	NFKBIE	O00221	500 aa		31.96	■■■□□ 2.71
ZNF280D-215	ENST00000560587	RIC3	Q7Z5B4	369 aa		31.96	■■■□□ 2.71
ZNF280D-215	ENST00000560587	RPGR	Q92834	1020 aa	Known RBP	31.96	■■■□□ 2.71
ZNF280D-215	ENST00000560587	LMNB1	P20700	586 aa		31.95	■■■□□ 2.71
ZNF280D-215	ENST00000560587	TRMT112	Q9UI30	125 aa	Known RBP	31.95	■■■□□ 2.71
ZNF280D-215	ENST00000560587	ISCA1	Q9BUE6	129 aa		31.94	■■■□□ 2.7
ZNF280D-215	ENST00000560587	MYH16	Q9H6N6	1097 aa		31.94	■■■□□ 2.7
ZNF280D-215	ENST00000560587	SH3TC1	Q8TE82	1336 aa		31.93	■■■□□ 2.7
ZNF280D-215	ENST00000560587	DDX58	O95786	925 aa	Known RBP	31.93	■■■□□ 2.7
ZNF280D-215	ENST00000560587	SLC10A5	Q5PT55	438 aa		31.93	■■■□□ 2.7
ZNF280D-215	ENST00000560587	NLRP3	Q96P20	1036 aa		31.93	■■■□□ 2.7
ZNF280D-215	ENST00000560587	ATP5J2-PTCD1	G3V325	749 aa		31.92	■■■□□ 2.7
ZNF280D-215	ENST00000560587	TIAM2	Q8IVF5	1701 aa		31.92	■■■□□ 2.7
ZNF280D-215	ENST00000560587	TAOK3	Q9H2K8	898 aa		31.92	■■■□□ 2.7
ZNF280D-215	ENST00000560587	SPINK5	Q9NQ38	1064 aa	Predicted RBP	31.92	■■■□□ 2.7
ZNF280D-215	ENST00000560587	LTBP3	Q9NS15	1303 aa		31.91	■■■□□ 2.7
ZNF280D-215	ENST00000560587	HOXA10	P31260	410 aa	Predicted RBP	31.91	■■■□□ 2.7
ZNF280D-215	ENST00000560587	CCDC93	Q567U6	631 aa		31.91	■■■□□ 2.7
ZNF280D-215	ENST00000560587	C7orf43	Q8WVR3	580 aa		31.91	■■■□□ 2.7
ZNF280D-215	ENST00000560587	CCDC88A	Q3V6T2	1871 aa		31.91	■■■□□ 2.7
ZNF280D-215	ENST00000560587	ZNF521	Q96K83	1311 aa		31.9	■■■□□ 2.7
ZNF280D-215	ENST00000560587	ZC3H4	Q9UPT8	1303 aa	Known RBP	31.9	■■■□□ 2.7
ZNF280D-215	ENST00000560587	TCERG1	O14776	1098 aa	Known RBP	31.9	■■■□□ 2.7
ZNF280D-215	ENST00000560587	EXOSC9	Q06265	439 aa	Known RBP	31.9	■■■□□ 2.7
ZNF280D-215	ENST00000560587	C3orf67	Q6ZVT6	689 aa		31.9	■■■□□ 2.7
ZNF280D-215	ENST00000560587	RBM17	Q96I25	401 aa	Known RBP	31.9	■■■□□ 2.7
ZNF280D-215	ENST00000560587	LAMB2	P55268	1798 aa		31.9	■■■□□ 2.7
ZNF280D-215	ENST00000560587	PRELP	P51888	382 aa		31.89	■■■□□ 2.7
ZNF280D-215	ENST00000560587	TRIM28	Q13263	835 aa	Known RBP	31.89	■■■□□ 2.7
ZNF280D-215	ENST00000560587	HCLS1	P14317	486 aa	Predicted RBP	31.87	■■■□□ 2.69
ZNF280D-215	ENST00000560587	SYNE4	Q8N205	404 aa		31.87	■■■□□ 2.69
ZNF280D-215	ENST00000560587	ZNF428	Q96B54	188 aa		31.87	■■■□□ 2.69
ZNF280D-215	ENST00000560587	CRAMP1	Q96RY5	1269 aa		31.87	■■■□□ 2.69
ZNF280D-215	ENST00000560587	DDX60	Q8IY21	1712 aa	Known RBP	31.86	■■■□□ 2.69
ZNF280D-215	ENST00000560587	SLC4A2	P04920	1241 aa		31.86	■■■□□ 2.69
ZNF280D-215	ENST00000560587	MYD88	Q99836	296 aa		31.86	■■■□□ 2.69
ZNF280D-215	ENST00000560587	VAMP4	O75379	141 aa		31.85	■■■□□ 2.69
ZNF280D-215	ENST00000560587	DICER1	Q9UPY3	1922 aa	Known RBP	31.85	■■■□□ 2.69
ZNF280D-215	ENST00000560587	CACNA1F	O60840	1977 aa		31.84	■■■□□ 2.69
ZNF280D-215	ENST00000560587	RTKN2	Q8IZC4	609 aa		31.84	■■■□□ 2.69
ZNF280D-215	ENST00000560587	METTL22	Q9BUU2	404 aa	Predicted RBP	31.84	■■■□□ 2.69
ZNF280D-215	ENST00000560587	MAP3K2	Q9Y2U5	619 aa		31.84	■■■□□ 2.69
ZNF280D-215	ENST00000560587	DIEXF	Q68CQ4	756 aa	Known RBP	31.83	■■■□□ 2.69
ZNF280D-215	ENST00000560587	OLFM4	Q6UX06	510 aa		31.83	■■■□□ 2.69
ZNF280D-215	ENST00000560587	KSR2	Q6VAB6	950 aa		31.83	■■■□□ 2.69
ZNF280D-215	ENST00000560587	FAM89A	Q96GI7	184 aa		31.83	■■■□□ 2.69
ZNF280D-215	ENST00000560587	KDM2B	Q8NHM5	1336 aa		31.83	■■■□□ 2.69
ZNF280D-215	ENST00000560587	PPEF1	O14829	653 aa	Predicted RBP	31.82	■■■□□ 2.68
ZNF280D-215	ENST00000560587	CC2D2B	Q6DHV5	1058 aa		31.82	■■■□□ 2.68
ZNF280D-215	ENST00000560587	CCDC191	Q8NCU4	936 aa		31.82	■■■□□ 2.68
ZNF280D-215	ENST00000560587	PI4KAP2	A4QPH2	592 aa		31.81	■■■□□ 2.68
ZNF280D-215	ENST00000560587	FKBP4	Q02790	459 aa	Known RBP eCLIP	31.81	■■■□□ 2.68
ZNF280D-215	ENST00000560587	G2E3	Q7L622	706 aa		31.81	■■■□□ 2.68
ZNF280D-215	ENST00000560587	PI4KAP1	Q8N8J0	262 aa		31.81	■■■□□ 2.68
ZNF280D-215	ENST00000560587	C1QTNF8	P60827	252 aa		31.8	■■■□□ 2.68
ZNF280D-215	ENST00000560587	FLII	Q13045	1269 aa		31.8	■■■□□ 2.68
ZNF280D-215	ENST00000560587	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	31.8	■■■□□ 2.68
ZNF280D-215	ENST00000560587	ABCC4	O15439	1325 aa		31.8	■■■□□ 2.68
ZNF280D-215	ENST00000560587	NEXN	Q0ZGT2	675 aa		31.79	■■■□□ 2.68
ZNF280D-215	ENST00000560587	RTL5	Q5HYW3	569 aa	Predicted RBP	31.79	■■■□□ 2.68
ZNF280D-215	ENST00000560587	CWC25	Q9NXE8	425 aa	Predicted RBP	31.79	■■■□□ 2.68
ZNF280D-215	ENST00000560587	SNED1	Q8TER0	1413 aa		31.78	■■■□□ 2.68
ZNF280D-215	ENST00000560587	DDX46	Q7L014	1031 aa	Known RBP	31.78	■■■□□ 2.68
ZNF280D-215	ENST00000560587	GRIPAP1	Q4V328	841 aa		31.77	■■■□□ 2.68
ZNF280D-215	ENST00000560587	NMRK2	Q9NPI5	230 aa		31.77	■■■□□ 2.68
ZNF280D-215	ENST00000560587		E9PSI1	815 aa		31.76	■■■□□ 2.68
ZNF280D-215	ENST00000560587	IRS4	O14654	1257 aa	Predicted RBP	31.76	■■■□□ 2.68
ZNF280D-215	ENST00000560587	KIF3C	O14782	793 aa		31.76	■■■□□ 2.68
ZNF280D-215	ENST00000560587	HSP90B1	P14625	803 aa	Known RBP	31.76	■■■□□ 2.68
ZNF280D-215	ENST00000560587	FKBP5	Q13451	457 aa	Predicted RBP	31.76	■■■□□ 2.68
ZNF280D-215	ENST00000560587	TMX4	Q9H1E5	349 aa	Predicted RBP	31.75	■■■□□ 2.67
ZNF280D-215	ENST00000560587	PCCA	P05165	728 aa	Predicted RBP	31.75	■■■□□ 2.67
ZNF280D-215	ENST00000560587	PSMD1	Q99460	953 aa		31.75	■■■□□ 2.67
ZNF280D-215	ENST00000560587	ZNF277	Q9NRM2	450 aa	Predicted RBP	31.75	■■■□□ 2.67
ZNF280D-215	ENST00000560587	GLTPD2	A6NH11	291 aa		31.74	■■■□□ 2.67
ZNF280D-215	ENST00000560587	GRAP	Q13588	217 aa		31.74	■■■□□ 2.67
ZNF280D-215	ENST00000560587	SF3B3	Q15393	1217 aa	Known RBP	31.74	■■■□□ 2.67
ZNF280D-215	ENST00000560587	GRAPL	Q8TC17	118 aa	Predicted RBP	31.74	■■■□□ 2.67
ZNF280D-215	ENST00000560587	ATP6V0A2	Q9Y487	856 aa		31.74	■■■□□ 2.67
ZNF280D-215	ENST00000560587	BBOX1	O75936	387 aa		31.73	■■■□□ 2.67
ZNF280D-215	ENST00000560587	IGKV5-2	P06315	115 aa		31.73	■■■□□ 2.67
ZNF280D-215	ENST00000560587	DPY19L2	Q6NUT2	758 aa		31.71	■■■□□ 2.67
ZNF280D-215	ENST00000560587	IARS	P41252	1262 aa	Known RBP	31.7	■■■□□ 2.67
ZNF280D-215	ENST00000560587	MIER1	Q8N108	512 aa		31.7	■■■□□ 2.67
ZNF280D-215	ENST00000560587	DNAAF4	Q8WXU2	420 aa		31.7	■■■□□ 2.67
ZNF280D-215	ENST00000560587	TAF1	P21675	1872 aa		31.69	■■■□□ 2.66
ZNF280D-215	ENST00000560587	CWF19L2	Q2TBE0	894 aa	Known RBP	31.69	■■■□□ 2.66

Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms