RNA–Protein interactions for RNA: ENST00000560492.1

CDC42BPB-207, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-207ENST00000560492 JDP2Q8WYK2 163 aa13.98□□□□□ -0.17
CDC42BPB-207ENST00000560492 RSPH6AQ9H0K4 717 aa13.98□□□□□ -0.17
CDC42BPB-207ENST00000560492 ABT1Q9ULW3 272 aaKnown RBP13.98□□□□□ -0.17
CDC42BPB-207ENST00000560492 GJA3Q9Y6H8 435 aa13.98□□□□□ -0.17
CDC42BPB-207ENST00000560492 NUP98P52948 1817 aa13.97□□□□□ -0.17
CDC42BPB-207ENST00000560492 GRM1Q13255 1194 aa13.97□□□□□ -0.17
CDC42BPB-207ENST00000560492 DCTN1Q14203 1278 aa13.97□□□□□ -0.17
CDC42BPB-207ENST00000560492 MAP1SQ66K74 1059 aaPredicted RBP13.97□□□□□ -0.17
CDC42BPB-207ENST00000560492 PNMA8AQ86V59 439 aaPredicted RBP13.97□□□□□ -0.17
CDC42BPB-207ENST00000560492 SYNE4Q8N205 404 aa13.97□□□□□ -0.17
CDC42BPB-207ENST00000560492 NEFMP07197 916 aa13.96□□□□□ -0.17
CDC42BPB-207ENST00000560492 LMOD1P29536 600 aaPredicted RBP13.96□□□□□ -0.17
CDC42BPB-207ENST00000560492 LBX1P52954 281 aa13.96□□□□□ -0.17
CDC42BPB-207ENST00000560492 EIF6P56537 245 aaKnown RBP13.96□□□□□ -0.17
CDC42BPB-207ENST00000560492 CNTROBQ8N137 903 aa13.96□□□□□ -0.17
CDC42BPB-207ENST00000560492 C7orf43Q8WVR3 580 aa13.96□□□□□ -0.17
CDC42BPB-207ENST00000560492 RPGRQ92834 1020 aaKnown RBP13.96□□□□□ -0.17
CDC42BPB-207ENST00000560492 PRDM10Q9NQV6 1147 aa13.96□□□□□ -0.17
CDC42BPB-207ENST00000560492 NPC1L1Q9UHC9 1359 aa13.96□□□□□ -0.18
CDC42BPB-207ENST00000560492 HAX1O00165 279 aa13.95□□□□□ -0.18
CDC42BPB-207ENST00000560492 TCERG1O14776 1098 aaKnown RBP13.95□□□□□ -0.18
CDC42BPB-207ENST00000560492 DEFB115Q30KQ5 88 aa13.95□□□□□ -0.18
CDC42BPB-207ENST00000560492 NYXQ9GZU5 481 aa13.95□□□□□ -0.18
CDC42BPB-207ENST00000560492 DLG5Q8TDM6 1919 aa13.95□□□□□ -0.18
CDC42BPB-207ENST00000560492 ADAMTSL1Q8N6G6 1762 aa13.94□□□□□ -0.18
CDC42BPB-207ENST00000560492 NBPF26B4DH59 902 aa13.94□□□□□ -0.18
CDC42BPB-207ENST00000560492 ITGBL1O95965 494 aaPredicted RBP13.94□□□□□ -0.18
CDC42BPB-207ENST00000560492 HLFQ16534 295 aa13.94□□□□□ -0.18
CDC42BPB-207ENST00000560492 NBPF10Q6P3W6 841 aaKnown RBP13.94□□□□□ -0.18
CDC42BPB-207ENST00000560492 KIF6Q6ZMV9 814 aa13.94□□□□□ -0.18
CDC42BPB-207ENST00000560492 NUTM1Q86Y26 1132 aa13.94□□□□□ -0.18
CDC42BPB-207ENST00000560492 GPC2Q8N158 579 aa13.94□□□□□ -0.18
CDC42BPB-207ENST00000560492 NBPF15Q8N660 670 aa13.94□□□□□ -0.18
CDC42BPB-207ENST00000560492 MIS18AQ9NYP9 233 aa13.94□□□□□ -0.18
CDC42BPB-207ENST00000560492 TRPM7Q96QT4 1865 aa13.93□□□□□ -0.18
CDC42BPB-207ENST00000560492 SPDYE1Q8NFV5 336 aaPredicted RBP13.93□□□□□ -0.18
CDC42BPB-207ENST00000560492 BEGAINQ9BUH8 593 aa13.93□□□□□ -0.18
CDC42BPB-207ENST00000560492 TMX4Q9H1E5 349 aaPredicted RBP13.93□□□□□ -0.18
CDC42BPB-207ENST00000560492 RRP7AQ9Y3A4 280 aaKnown RBP13.93□□□□□ -0.18
CDC42BPB-207ENST00000560492 MYL6BP14649 208 aa13.92□□□□□ -0.18
CDC42BPB-207ENST00000560492 GPTP24298 496 aa13.92□□□□□ -0.18
CDC42BPB-207ENST00000560492 TAF7Q15545 349 aaPredicted RBP13.92□□□□□ -0.18
CDC42BPB-207ENST00000560492 LARGE2Q8N3Y3 721 aa13.92□□□□□ -0.18
CDC42BPB-207ENST00000560492 WBP1LQ9NX94 342 aa13.92□□□□□ -0.18
CDC42BPB-207ENST00000560492 ABCC12Q96J65 1359 aa13.92□□□□□ -0.18
CDC42BPB-207ENST00000560492 WDR33Q9C0J8 1336 aaKnown RBP13.91□□□□□ -0.18
CDC42BPB-207ENST00000560492 KLRG2A4D1S0 409 aaPredicted RBP13.91□□□□□ -0.18
CDC42BPB-207ENST00000560492 RASSF10A6NK89 507 aa13.91□□□□□ -0.18
CDC42BPB-207ENST00000560492 FZD9O00144 591 aa13.91□□□□□ -0.18
CDC42BPB-207ENST00000560492 MAP2K1Q02750 393 aaPredicted RBP13.91□□□□□ -0.18
CDC42BPB-207ENST00000560492 KDM3BQ7LBC6 1761 aa13.91□□□□□ -0.18
CDC42BPB-207ENST00000560492 HSPA8P11142 646 aaKnown RBP13.9□□□□□ -0.18
CDC42BPB-207ENST00000560492 CC2D2BQ6DHV5 1058 aa13.9□□□□□ -0.18
CDC42BPB-207ENST00000560492 NIM1KQ8IY84 436 aa13.9□□□□□ -0.18
CDC42BPB-207ENST00000560492 RBM17Q96I25 401 aaKnown RBP13.9□□□□□ -0.18
CDC42BPB-207ENST00000560492 PSMD1Q99460 953 aa13.9□□□□□ -0.18
CDC42BPB-207ENST00000560492 ZBTB3Q9H5J0 574 aa13.9□□□□□ -0.18
CDC42BPB-207ENST00000560492 PPEF1O14829 653 aaPredicted RBP13.89□□□□□ -0.19
CDC42BPB-207ENST00000560492 RGL2O15211 777 aa13.89□□□□□ -0.19
CDC42BPB-207ENST00000560492 HTATSF1O43719 755 aaKnown RBP13.89□□□□□ -0.19
CDC42BPB-207ENST00000560492 PPP2R1AP30153 589 aa13.89□□□□□ -0.19
CDC42BPB-207ENST00000560492 DDX21Q9NR30 783 aaKnown RBP eCLIP13.89□□□□□ -0.19
CDC42BPB-207ENST00000560492 LTBP1Q14766 1721 aa13.89□□□□□ -0.19
CDC42BPB-207ENST00000560492 MAP3K15Q6ZN16 1313 aa13.89□□□□□ -0.19
CDC42BPB-207ENST00000560492 PPIP5K2O43314 1243 aa13.88□□□□□ -0.19
CDC42BPB-207ENST00000560492 EPS15P42566 896 aa13.88□□□□□ -0.19
CDC42BPB-207ENST00000560492 ECE1P42892 770 aa13.88□□□□□ -0.19
CDC42BPB-207ENST00000560492 FMR1Q06787 632 aaKnown RBP eCLIP13.88□□□□□ -0.19
CDC42BPB-207ENST00000560492 TTLL7Q6ZT98 887 aa13.88□□□□□ -0.19
CDC42BPB-207ENST00000560492 PNISRQ8TF01 805 aaKnown RBP13.88□□□□□ -0.19
CDC42BPB-207ENST00000560492 CAPNS2Q96L46 248 aa13.88□□□□□ -0.19
CDC42BPB-207ENST00000560492 COL4A5P29400 1685 aa13.88□□□□□ -0.19
CDC42BPB-207ENST00000560492 CCDC85CA6NKD9 419 aa13.87□□□□□ -0.19
CDC42BPB-207ENST00000560492 ERVV-1B6SEH8 477 aa13.87□□□□□ -0.19
CDC42BPB-207ENST00000560492 CYP4F22Q6NT55 531 aa13.87□□□□□ -0.19
CDC42BPB-207ENST00000560492 ABHD8Q96I13 439 aa13.87□□□□□ -0.19
CDC42BPB-207ENST00000560492 CFAP44Q96MT7 982 aa13.87□□□□□ -0.19
CDC42BPB-207ENST00000560492 TRAF5O00463 557 aa13.86□□□□□ -0.19
CDC42BPB-207ENST00000560492 AOC3Q16853 763 aa13.86□□□□□ -0.19
CDC42BPB-207ENST00000560492 FAM161AQ3B820 660 aa13.86□□□□□ -0.19
CDC42BPB-207ENST00000560492 CRY2Q49AN0 593 aa13.86□□□□□ -0.19
CDC42BPB-207ENST00000560492 GRIPAP1Q4V328 841 aa13.86□□□□□ -0.19
CDC42BPB-207ENST00000560492 SUSD4Q5VX71 490 aa13.86□□□□□ -0.19
CDC42BPB-207ENST00000560492 PPP1R42Q7Z4L9 355 aa13.86□□□□□ -0.19
CDC42BPB-207ENST00000560492 GPR101Q96P66 508 aaPredicted RBP13.86□□□□□ -0.19
CDC42BPB-207ENST00000560492 SCNN1DP51172 638 aa13.85□□□□□ -0.19
CDC42BPB-207ENST00000560492 USP50Q70EL3 339 aaPredicted RBP13.85□□□□□ -0.19
CDC42BPB-207ENST00000560492 ZNF408Q9H9D4 720 aa13.85□□□□□ -0.19
CDC42BPB-207ENST00000560492 TSKSQ9UJT2 592 aa13.85□□□□□ -0.19
CDC42BPB-207ENST00000560492 UBN2Q6ZU65 1347 aa13.85□□□□□ -0.19
CDC42BPB-207ENST00000560492 MAPK8IP3Q9UPT6 1336 aa13.85□□□□□ -0.19
CDC42BPB-207ENST00000560492 THSD7BQ9C0I4 1608 aa13.84□□□□□ -0.19
CDC42BPB-207ENST00000560492 PRKAR2AP13861 404 aaKnown RBP13.84□□□□□ -0.19
CDC42BPB-207ENST00000560492 SLC51AQ86UW1 340 aa13.84□□□□□ -0.19
CDC42BPB-207ENST00000560492 NLRP3Q96P20 1036 aa13.84□□□□□ -0.19
CDC42BPB-207ENST00000560492 CRAMP1Q96RY5 1269 aa13.84□□□□□ -0.19
CDC42BPB-207ENST00000560492 THUMPD2Q9BTF0 503 aaKnown RBP13.84□□□□□ -0.19
CDC42BPB-207ENST00000560492 BCL2L13Q9BXK5 485 aa13.84□□□□□ -0.19
CDC42BPB-207ENST00000560492 IBTKQ9P2D0 1353 aaPredicted RBP13.83□□□□□ -0.19
CDC42BPB-207ENST00000560492 LAMB2P55268 1798 aa13.83□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms