RNA–Protein interactions for RNA: ENST00000560462.1

HERC1-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 647 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-208ENST00000560462 AFDNP55196 1824 aaKnown RBP9.33□□□□□ -0.92
HERC1-208ENST00000560462 AKAP11Q9UKA4 1901 aa9.33□□□□□ -0.92
HERC1-208ENST00000560462 A0A1W2PPC1 479 aa9.32□□□□□ -0.92
HERC1-208ENST00000560462 HOXC9P31274 260 aa9.32□□□□□ -0.92
HERC1-208ENST00000560462 CRKLP46109 303 aaKnown RBP9.32□□□□□ -0.92
HERC1-208ENST00000560462 FKBP4Q02790 459 aaKnown RBP eCLIP9.32□□□□□ -0.92
HERC1-208ENST00000560462 CCDC93Q567U6 631 aa9.32□□□□□ -0.92
HERC1-208ENST00000560462 ZNF831Q5JPB2 1677 aa9.32□□□□□ -0.92
HERC1-208ENST00000560462 RGPD2P0DJD1 1756 aa9.32□□□□□ -0.92
HERC1-208ENST00000560462 CENPJQ9HC77 1338 aaPredicted RBP9.31□□□□□ -0.92
HERC1-208ENST00000560462 TBC1D8O95759 1140 aa9.31□□□□□ -0.92
HERC1-208ENST00000560462 AMPHP49418 695 aa9.31□□□□□ -0.92
HERC1-208ENST00000560462 EIF6P56537 245 aaKnown RBP9.31□□□□□ -0.92
HERC1-208ENST00000560462 GPR153Q6NV75 609 aa9.31□□□□□ -0.92
HERC1-208ENST00000560462 MPHOSPH9Q99550 1183 aa9.31□□□□□ -0.92
HERC1-208ENST00000560462 BRIP1Q9BX63 1249 aa9.31□□□□□ -0.92
HERC1-208ENST00000560462 MUC3AQ02505 3323 aa9.3□□□□□ -0.92
HERC1-208ENST00000560462 GPR25O00155 361 aa9.3□□□□□ -0.92
HERC1-208ENST00000560462 PDAP1Q13442 181 aaKnown RBP9.3□□□□□ -0.92
HERC1-208ENST00000560462 NOM1Q5C9Z4 860 aaKnown RBP9.3□□□□□ -0.92
HERC1-208ENST00000560462 Q7L0L9 218 aa9.3□□□□□ -0.92
HERC1-208ENST00000560462 JDP2Q8WYK2 163 aa9.3□□□□□ -0.92
HERC1-208ENST00000560462 ADARB2Q9NS39 739 aaKnown RBP9.3□□□□□ -0.92
HERC1-208ENST00000560462 SLC10A3P09131 477 aa9.29□□□□□ -0.92
HERC1-208ENST00000560462 IARSP41252 1262 aaKnown RBP9.29□□□□□ -0.92
HERC1-208ENST00000560462 STYK1Q6J9G0 422 aa9.29□□□□□ -0.92
HERC1-208ENST00000560462 CDC37L1Q7L3B6 337 aa9.29□□□□□ -0.92
HERC1-208ENST00000560462 HOMEZQ8IX15 550 aa9.29□□□□□ -0.92
HERC1-208ENST00000560462 STAC3Q96MF2 364 aa9.29□□□□□ -0.92
HERC1-208ENST00000560462 TMEM106CQ9BVX2 250 aa9.29□□□□□ -0.92
HERC1-208ENST00000560462 MTMR10Q9NXD2 777 aa9.29□□□□□ -0.92
HERC1-208ENST00000560462 KIAA0100Q14667 2235 aaKnown RBP9.29□□□□□ -0.92
HERC1-208ENST00000560462 MYH14Q7Z406 1995 aaKnown RBP9.28□□□□□ -0.92
HERC1-208ENST00000560462 TTC28Q96AY4 2481 aa9.28□□□□□ -0.92
HERC1-208ENST00000560462 LAMB4A4D0S4 1761 aa9.28□□□□□ -0.92
HERC1-208ENST00000560462 TMEM265A0A087WTH1 108 aa9.28□□□□□ -0.92
HERC1-208ENST00000560462 FKTNO75072 461 aa9.28□□□□□ -0.92
HERC1-208ENST00000560462 C2orf69Q8N8R5 385 aa9.28□□□□□ -0.92
HERC1-208ENST00000560462 DPF3Q92784 378 aa9.28□□□□□ -0.92
HERC1-208ENST00000560462 SLX4Q8IY92 1834 aa9.28□□□□□ -0.92
HERC1-208ENST00000560462 EVC2Q86UK5 1308 aa9.28□□□□□ -0.92
HERC1-208ENST00000560462 SYNGAP1Q96PV0 1343 aa9.28□□□□□ -0.92
HERC1-208ENST00000560462 COL11A2P13942 1736 aaPredicted RBP9.28□□□□□ -0.92
HERC1-208ENST00000560462 BCORQ6W2J9 1755 aa9.27□□□□□ -0.92
HERC1-208ENST00000560462 RTKN2Q8IZC4 609 aa9.27□□□□□ -0.93
HERC1-208ENST00000560462 C7orf43Q8WVR3 580 aa9.27□□□□□ -0.93
HERC1-208ENST00000560462 GBA2Q9HCG7 927 aaPredicted RBP9.27□□□□□ -0.93
HERC1-208ENST00000560462 PGAP2Q9UHJ9 254 aa9.27□□□□□ -0.93
HERC1-208ENST00000560462 MON2Q7Z3U7 1717 aa9.27□□□□□ -0.93
HERC1-208ENST00000560462 MAP3K12Q12852 859 aa9.26□□□□□ -0.93
HERC1-208ENST00000560462 ZC3H15Q8WU90 426 aaKnown RBP9.26□□□□□ -0.93
HERC1-208ENST00000560462 SYMPKQ92797 1274 aaKnown RBP9.26□□□□□ -0.93
HERC1-208ENST00000560462 ARMC5Q96C12 935 aa9.26□□□□□ -0.93
HERC1-208ENST00000560462 GPRC5DQ9NZD1 345 aa9.26□□□□□ -0.93
HERC1-208ENST00000560462 NARFQ9UHQ1 456 aa9.26□□□□□ -0.93
HERC1-208ENST00000560462 SPG7Q9UQ90 795 aa9.26□□□□□ -0.93
HERC1-208ENST00000560462 TRIM17Q9Y577 477 aa9.26□□□□□ -0.93
HERC1-208ENST00000560462 SBNO2Q9Y2G9 1366 aa9.25□□□□□ -0.93
HERC1-208ENST00000560462 SRGNP10124 158 aa9.25□□□□□ -0.93
HERC1-208ENST00000560462 MASTLQ96GX5 879 aa9.25□□□□□ -0.93
HERC1-208ENST00000560462 ANKRD31Q8N7Z5 1873 aa9.25□□□□□ -0.93
HERC1-208ENST00000560462 EYSQ5T1H1 3165 aa9.24□□□□□ -0.93
HERC1-208ENST00000560462 PPEF1O14829 653 aaPredicted RBP9.24□□□□□ -0.93
HERC1-208ENST00000560462 INTS5Q6P9B9 1019 aaKnown RBP9.24□□□□□ -0.93
HERC1-208ENST00000560462 OTOP1Q7RTM1 612 aa9.24□□□□□ -0.93
HERC1-208ENST00000560462 USP48Q86UV5 1035 aa9.24□□□□□ -0.93
HERC1-208ENST00000560462 MFRPQ9BY79 579 aa9.24□□□□□ -0.93
HERC1-208ENST00000560462 LAMA2P24043 3122 aaKnown RBP9.23□□□□□ -0.93
HERC1-208ENST00000560462 TNFRSF10AO00220 468 aa9.23□□□□□ -0.93
HERC1-208ENST00000560462 PTCD1O75127 700 aaKnown RBP9.23□□□□□ -0.93
HERC1-208ENST00000560462 E2F4Q16254 413 aa9.23□□□□□ -0.93
HERC1-208ENST00000560462 PRR5LQ6MZQ0 368 aa9.23□□□□□ -0.93
HERC1-208ENST00000560462 OLFM4Q6UX06 510 aa9.23□□□□□ -0.93
HERC1-208ENST00000560462 BCL2L12Q9HB09 334 aa9.23□□□□□ -0.93
HERC1-208ENST00000560462 NR2E3Q9Y5X4 410 aa9.23□□□□□ -0.93
HERC1-208ENST00000560462 RPTORQ8N122 1335 aa9.23□□□□□ -0.93
HERC1-208ENST00000560462 RTL1A6NKG5 1358 aa9.23□□□□□ -0.93
HERC1-208ENST00000560462 ARFGEF2Q9Y6D5 1785 aa9.22□□□□□ -0.93
HERC1-208ENST00000560462 SLC4A8Q2Y0W8 1093 aa9.22□□□□□ -0.93
HERC1-208ENST00000560462 DLK2Q6UY11 383 aa9.22□□□□□ -0.93
HERC1-208ENST00000560462 RASAL3Q86YV0 1011 aa9.22□□□□□ -0.93
HERC1-208ENST00000560462 PTPN22Q9Y2R2 807 aa9.22□□□□□ -0.93
HERC1-208ENST00000560462 SOS1Q07889 1333 aaPredicted RBP9.22□□□□□ -0.93
HERC1-208ENST00000560462 PIEZO1Q92508 2521 aa9.22□□□□□ -0.93
HERC1-208ENST00000560462 CACNA1SQ13698 1873 aa9.21□□□□□ -0.93
HERC1-208ENST00000560462 PRUNE2Q8WUY3 3088 aa9.21□□□□□ -0.93
HERC1-208ENST00000560462 TESPA1A2RU30 521 aaPredicted RBP9.21□□□□□ -0.94
HERC1-208ENST00000560462 NPHP1O15259 732 aa9.21□□□□□ -0.94
HERC1-208ENST00000560462 PHKG2P15735 406 aa9.21□□□□□ -0.94
HERC1-208ENST00000560462 IFNL2Q8IZJ0 200 aa9.21□□□□□ -0.94
HERC1-208ENST00000560462 COL15A1P39059 1388 aa9.21□□□□□ -0.94
HERC1-208ENST00000560462 FBLN1P23142 703 aa9.2□□□□□ -0.94
HERC1-208ENST00000560462 HIRAP54198 1017 aaPredicted RBP9.2□□□□□ -0.94
HERC1-208ENST00000560462 ZNF579Q8NAF0 562 aaKnown RBP9.2□□□□□ -0.94
HERC1-208ENST00000560462 ZNF333Q96JL9 665 aa9.2□□□□□ -0.94
HERC1-208ENST00000560462 PSMD1Q99460 953 aa9.2□□□□□ -0.94
HERC1-208ENST00000560462 ARIH1Q9Y4X5 557 aaPredicted RBP9.2□□□□□ -0.94
HERC1-208ENST00000560462 COL4A5P29400 1685 aa9.2□□□□□ -0.94
HERC1-208ENST00000560462 WTIPA6NIX2 430 aaPredicted RBP9.19□□□□□ -0.94
HERC1-208ENST00000560462 ERVV-2B6SEH9 535 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms