RNA–Protein interactions for RNA: ENST00000560417.5

MARK3-220, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 3

Gene MARK3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-220ENST00000560417 NEUROD4Q9HD90 331 aa9.47□□□□□ -0.89
MARK3-220ENST00000560417 RPLP1P05386 114 aaKnown RBP9.46□□□□□ -0.9
MARK3-220ENST00000560417 PLCB3Q01970 1234 aa9.46□□□□□ -0.9
MARK3-220ENST00000560417 UBAP2LQ14157 1087 aaKnown RBP9.46□□□□□ -0.9
MARK3-220ENST00000560417 EAPPQ56P03 285 aaPredicted RBP9.46□□□□□ -0.9
MARK3-220ENST00000560417 KIFC2Q96AC6 838 aa9.46□□□□□ -0.9
MARK3-220ENST00000560417 IRX2Q9BZI1 471 aaPredicted RBP9.46□□□□□ -0.9
MARK3-220ENST00000560417 SENP2Q9HC62 589 aa9.46□□□□□ -0.9
MARK3-220ENST00000560417 RTCBQ9Y3I0 505 aaKnown RBP9.46□□□□□ -0.9
MARK3-220ENST00000560417 KCNMB2Q9Y691 235 aa9.46□□□□□ -0.9
MARK3-220ENST00000560417 PCSK2P16519 638 aa9.45□□□□□ -0.9
MARK3-220ENST00000560417 TRIP4Q15650 581 aaPredicted RBP9.45□□□□□ -0.9
MARK3-220ENST00000560417 XKR5Q6UX68 686 aa9.45□□□□□ -0.9
MARK3-220ENST00000560417 PGBD3Q8N328 593 aa9.45□□□□□ -0.9
MARK3-220ENST00000560417 TRIM47Q96LD4 638 aa9.45□□□□□ -0.9
MARK3-220ENST00000560417 USP20Q9Y2K6 914 aa9.45□□□□□ -0.9
MARK3-220ENST00000560417 E9PSI1 815 aa9.44□□□□□ -0.9
MARK3-220ENST00000560417 RANGAP1P46060 587 aaPredicted RBP9.44□□□□□ -0.9
MARK3-220ENST00000560417 ZNF326Q5BKZ1 582 aaKnown RBP9.44□□□□□ -0.9
MARK3-220ENST00000560417 NIF3L1Q9GZT8 377 aa9.44□□□□□ -0.9
MARK3-220ENST00000560417 C11orf16Q9NQ32 467 aa9.44□□□□□ -0.9
MARK3-220ENST00000560417 KIAA1522Q9P206 1035 aaPredicted RBP9.44□□□□□ -0.9
MARK3-220ENST00000560417 A6NHS1 94 aa9.43□□□□□ -0.9
MARK3-220ENST00000560417 KCNQ4P56696 695 aa9.43□□□□□ -0.9
MARK3-220ENST00000560417 EFHC2Q5JST6 749 aa9.43□□□□□ -0.9
MARK3-220ENST00000560417 CEP63Q96MT8 703 aa9.43□□□□□ -0.9
MARK3-220ENST00000560417 ZCCHC2Q9C0B9 1178 aaKnown RBP9.43□□□□□ -0.9
MARK3-220ENST00000560417 GMPR2Q9P2T1 348 aaKnown RBP9.43□□□□□ -0.9
MARK3-220ENST00000560417 GJA3Q9Y6H8 435 aa9.43□□□□□ -0.9
MARK3-220ENST00000560417 EFSO43281 561 aa9.42□□□□□ -0.9
MARK3-220ENST00000560417 EGFRP00533 1210 aa9.42□□□□□ -0.9
MARK3-220ENST00000560417 FAM157BP0CG42 384 aa9.42□□□□□ -0.9
MARK3-220ENST00000560417 C8orf34Q49A92 452 aa9.42□□□□□ -0.9
MARK3-220ENST00000560417 MRRFQ96E11 262 aaKnown RBP9.42□□□□□ -0.9
MARK3-220ENST00000560417 BRD7Q9NPI1 651 aa9.42□□□□□ -0.9
MARK3-220ENST00000560417 LCE2BO14633 110 aa9.41□□□□□ -0.9
MARK3-220ENST00000560417 EPB42P16452 691 aa9.41□□□□□ -0.9
MARK3-220ENST00000560417 ENOX2Q16206 610 aaKnown RBP9.41□□□□□ -0.9
MARK3-220ENST00000560417 PDE12Q6L8Q7 609 aaKnown RBP9.41□□□□□ -0.9
MARK3-220ENST00000560417 FIGNL1Q6PIW4 674 aa9.41□□□□□ -0.9
MARK3-220ENST00000560417 CMTR1Q8N1G2 835 aaKnown RBP9.41□□□□□ -0.9
MARK3-220ENST00000560417 CCDC155Q8N6L0 562 aa9.41□□□□□ -0.9
MARK3-220ENST00000560417 NDFIP2Q9NV92 336 aa9.41□□□□□ -0.9
MARK3-220ENST00000560417 CUEDC1Q9NWM3 386 aaPredicted RBP9.41□□□□□ -0.9
MARK3-220ENST00000560417 MAPK8P45983 427 aa9.4□□□□□ -0.9
MARK3-220ENST00000560417 DBN1Q16643 649 aa9.4□□□□□ -0.9
MARK3-220ENST00000560417 TRIM22Q8IYM9 498 aa9.4□□□□□ -0.9
MARK3-220ENST00000560417 NUCKS1Q9H1E3 243 aaKnown RBP9.4□□□□□ -0.9
MARK3-220ENST00000560417 HCN2Q9UL51 889 aa9.4□□□□□ -0.9
MARK3-220ENST00000560417 FNDC3AQ9Y2H6 1198 aaKnown RBP9.4□□□□□ -0.9
MARK3-220ENST00000560417 H7C1W4 665 aa9.39□□□□□ -0.91
MARK3-220ENST00000560417 ATXN7O15265 892 aaPredicted RBP9.39□□□□□ -0.91
MARK3-220ENST00000560417 LDHBP07195 334 aaKnown RBP9.39□□□□□ -0.91
MARK3-220ENST00000560417 VAMP1P23763 118 aa9.39□□□□□ -0.91
MARK3-220ENST00000560417 ORC1Q13415 861 aa9.39□□□□□ -0.91
MARK3-220ENST00000560417 RIPOR1Q6ZS17 1223 aa9.39□□□□□ -0.91
MARK3-220ENST00000560417 GMCL1Q96IK5 515 aa9.39□□□□□ -0.91
MARK3-220ENST00000560417 CSRNP1Q96S65 589 aa9.39□□□□□ -0.91
MARK3-220ENST00000560417 CFHR5Q9BXR6 569 aa9.39□□□□□ -0.91
MARK3-220ENST00000560417 PCDHGC4Q9Y5F7 938 aa9.39□□□□□ -0.91
MARK3-220ENST00000560417 UBAP1LF5GYI3 381 aa9.38□□□□□ -0.91
MARK3-220ENST00000560417 PRPF40AO75400 957 aaKnown RBP9.38□□□□□ -0.91
MARK3-220ENST00000560417 TNFRSF21O75509 655 aa9.38□□□□□ -0.91
MARK3-220ENST00000560417 SNRPBP14678 240 aaKnown RBP9.38□□□□□ -0.91
MARK3-220ENST00000560417 TNP2Q05952 138 aa9.38□□□□□ -0.91
MARK3-220ENST00000560417 TTC16Q8NEE8 873 aa9.38□□□□□ -0.91
MARK3-220ENST00000560417 DNAJC25Q9H1X3 360 aa9.38□□□□□ -0.91
MARK3-220ENST00000560417 WWC3Q9ULE0 1092 aa9.38□□□□□ -0.91
MARK3-220ENST00000560417 PNMA6FA0A0J9YX94 578 aa9.37□□□□□ -0.91
MARK3-220ENST00000560417 EIF1AYO14602 144 aaKnown RBP9.37□□□□□ -0.91
MARK3-220ENST00000560417 XYLBO75191 536 aa9.37□□□□□ -0.91
MARK3-220ENST00000560417 NEFLP07196 543 aa9.37□□□□□ -0.91
MARK3-220ENST00000560417 ITGA6P23229 1130 aa9.37□□□□□ -0.91
MARK3-220ENST00000560417 FGD1P98174 961 aa9.37□□□□□ -0.91
MARK3-220ENST00000560417 SFSWAPQ12872 951 aaKnown RBP9.37□□□□□ -0.91
MARK3-220ENST00000560417 LAMC2Q13753 1193 aa9.37□□□□□ -0.91
MARK3-220ENST00000560417 ZNF837Q96EG3 531 aaPredicted RBP9.37□□□□□ -0.91
MARK3-220ENST00000560417 SETDB2Q96T68 719 aa9.37□□□□□ -0.91
MARK3-220ENST00000560417 ELP3Q9H9T3 547 aa9.37□□□□□ -0.91
MARK3-220ENST00000560417 IGSF5Q9NSI5 407 aa9.37□□□□□ -0.91
MARK3-220ENST00000560417 TMEM63CQ9P1W3 806 aa9.37□□□□□ -0.91
MARK3-220ENST00000560417 KCNH4Q9UQ05 1017 aa9.37□□□□□ -0.91
MARK3-220ENST00000560417 BNIP3LO60238 219 aa9.36□□□□□ -0.91
MARK3-220ENST00000560417 MAPTP10636 758 aaKnown RBP9.36□□□□□ -0.91
MARK3-220ENST00000560417 ZNF438Q7Z4V0 828 aa9.36□□□□□ -0.91
MARK3-220ENST00000560417 FOXD3Q9UJU5 478 aaPredicted RBP9.36□□□□□ -0.91
MARK3-220ENST00000560417 DCDC2BA2VCK2 349 aa9.35□□□□□ -0.91
MARK3-220ENST00000560417 MRPL58Q14197 206 aaKnown RBP9.35□□□□□ -0.91
MARK3-220ENST00000560417 ALG1LQ6GMV1 187 aa9.35□□□□□ -0.91
MARK3-220ENST00000560417 NLRP13Q86W25 1043 aa9.35□□□□□ -0.91
MARK3-220ENST00000560417 SNX29Q8TEQ0 813 aa9.35□□□□□ -0.91
MARK3-220ENST00000560417 FBF1Q8TES7 1133 aa9.35□□□□□ -0.91
MARK3-220ENST00000560417 GSX2Q9BZM3 304 aa9.35□□□□□ -0.91
MARK3-220ENST00000560417 STRN4Q9NRL3 753 aa9.35□□□□□ -0.91
MARK3-220ENST00000560417 RNF19AQ9NV58 838 aa9.35□□□□□ -0.91
MARK3-220ENST00000560417 KHNYNO15037 678 aaKnown RBP9.34□□□□□ -0.91
MARK3-220ENST00000560417 CPNE3O75131 537 aaKnown RBP9.34□□□□□ -0.91
MARK3-220ENST00000560417 ATP2B2Q01814 1243 aa9.34□□□□□ -0.91
MARK3-220ENST00000560417 DUSP9Q99956 384 aaKnown RBP9.34□□□□□ -0.91
MARK3-220ENST00000560417 CHRDQ9H2X0 955 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms