RNA–Protein interactions for RNA: ENST00000560414.1

IDH3A-219, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, humanhuman

TSL 2

Gene IDH3A, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3A-219ENST00000560414 MBIPQ9NS73 344 aa19.15■□□□□ 0.66
IDH3A-219ENST00000560414 COL11A2P13942 1736 aaPredicted RBP19.14■□□□□ 0.66
IDH3A-219ENST00000560414 ZNF853P0CG23 659 aa19.14■□□□□ 0.65
IDH3A-219ENST00000560414 SRGNP10124 158 aa19.14■□□□□ 0.65
IDH3A-219ENST00000560414 C21orf2O43822 256 aa19.13■□□□□ 0.65
IDH3A-219ENST00000560414 GTF2E1P29083 439 aaPredicted RBP19.13■□□□□ 0.65
IDH3A-219ENST00000560414 C1QTNF8P60827 252 aa19.13■□□□□ 0.65
IDH3A-219ENST00000560414 AIMP1Q12904 312 aaKnown RBP19.13■□□□□ 0.65
IDH3A-219ENST00000560414 COPS6Q7L5N1 327 aa19.13■□□□□ 0.65
IDH3A-219ENST00000560414 NUTM1Q86Y26 1132 aa19.13■□□□□ 0.65
IDH3A-219ENST00000560414 RNF181Q9P0P0 153 aa19.13■□□□□ 0.65
IDH3A-219ENST00000560414 UBN2Q6ZU65 1347 aa19.13■□□□□ 0.65
IDH3A-219ENST00000560414 NUP98P52948 1817 aa19.13■□□□□ 0.65
IDH3A-219ENST00000560414 PRELPP51888 382 aa19.12■□□□□ 0.65
IDH3A-219ENST00000560414 DUSP27Q5VZP5 1158 aa19.12■□□□□ 0.65
IDH3A-219ENST00000560414 STYK1Q6J9G0 422 aa19.12■□□□□ 0.65
IDH3A-219ENST00000560414 GIGYF2Q6Y7W6 1299 aaKnown RBP19.12■□□□□ 0.65
IDH3A-219ENST00000560414 XAGE3Q8WTP9 111 aa19.12■□□□□ 0.65
IDH3A-219ENST00000560414 MASTLQ96GX5 879 aa19.12■□□□□ 0.65
IDH3A-219ENST00000560414 DDX21Q9NR30 783 aaKnown RBP eCLIP19.12■□□□□ 0.65
IDH3A-219ENST00000560414 IFT57Q9NWB7 429 aa19.12■□□□□ 0.65
IDH3A-219ENST00000560414 CHPF2Q9P2E5 772 aa19.12■□□□□ 0.65
IDH3A-219ENST00000560414 GNAI1P63096 354 aa19.11■□□□□ 0.65
IDH3A-219ENST00000560414 HDGFL1Q5TGJ6 251 aa19.11■□□□□ 0.65
IDH3A-219ENST00000560414 SUSD4Q5VX71 490 aa19.11■□□□□ 0.65
IDH3A-219ENST00000560414 ZNF34Q8IZ26 560 aa19.11■□□□□ 0.65
IDH3A-219ENST00000560414 CNKSR1Q969H4 720 aa19.11■□□□□ 0.65
IDH3A-219ENST00000560414 KLRG2A4D1S0 409 aaPredicted RBP19.1■□□□□ 0.65
IDH3A-219ENST00000560414 NFKBIEO00221 500 aa19.1■□□□□ 0.65
IDH3A-219ENST00000560414 CALD1Q05682 793 aaKnown RBP19.1■□□□□ 0.65
IDH3A-219ENST00000560414 ERFEQ4G0M1 354 aa19.1■□□□□ 0.65
IDH3A-219ENST00000560414 PRPF40BQ6NWY9 871 aaKnown RBP19.1■□□□□ 0.65
IDH3A-219ENST00000560414 RNF25Q96BH1 459 aaPredicted RBP19.1■□□□□ 0.65
IDH3A-219ENST00000560414 NYXQ9GZU5 481 aa19.1■□□□□ 0.65
IDH3A-219ENST00000560414 ABCC12Q96J65 1359 aa19.09■□□□□ 0.65
IDH3A-219ENST00000560414 ELL2O00472 640 aaPredicted RBP19.09■□□□□ 0.65
IDH3A-219ENST00000560414 HOXB7P09629 217 aa19.09■□□□□ 0.65
IDH3A-219ENST00000560414 RIOK3O14730 519 aaKnown RBP19.08■□□□□ 0.64
IDH3A-219ENST00000560414 NPR1P16066 1061 aa19.08■□□□□ 0.64
IDH3A-219ENST00000560414 SLX4Q8IY92 1834 aa19.08■□□□□ 0.64
IDH3A-219ENST00000560414 SBF1O95248 1867 aa19.07■□□□□ 0.64
IDH3A-219ENST00000560414 NTSR2O95665 410 aa19.07■□□□□ 0.64
IDH3A-219ENST00000560414 LMNB1P20700 586 aa19.07■□□□□ 0.64
IDH3A-219ENST00000560414 KIF3CO14782 793 aa19.06■□□□□ 0.64
IDH3A-219ENST00000560414 CD44P16070 742 aaKnown RBP19.06■□□□□ 0.64
IDH3A-219ENST00000560414 WWC1Q8IX03 1113 aa19.06■□□□□ 0.64
IDH3A-219ENST00000560414 C8orf58Q8NAV2 365 aa19.06■□□□□ 0.64
IDH3A-219ENST00000560414 NMRK2Q9NPI5 230 aa19.06■□□□□ 0.64
IDH3A-219ENST00000560414 DBF4Q9UBU7 674 aaPredicted RBP19.06■□□□□ 0.64
IDH3A-219ENST00000560414 PARP10Q53GL7 1025 aa19.05■□□□□ 0.64
IDH3A-219ENST00000560414 PPP1R42Q7Z4L9 355 aa19.05■□□□□ 0.64
IDH3A-219ENST00000560414 C7orf43Q8WVR3 580 aa19.05■□□□□ 0.64
IDH3A-219ENST00000560414 TSR2Q969E8 191 aaKnown RBP19.05■□□□□ 0.64
IDH3A-219ENST00000560414 ZNF428Q96B54 188 aa19.05■□□□□ 0.64
IDH3A-219ENST00000560414 SALL2Q9Y467 1007 aaPredicted RBP19.05■□□□□ 0.64
IDH3A-219ENST00000560414 CACNA1SQ13698 1873 aa19.05■□□□□ 0.64
IDH3A-219ENST00000560414 IBTKQ9P2D0 1353 aaPredicted RBP19.05■□□□□ 0.64
IDH3A-219ENST00000560414 TNRC6CQ9HCJ0 1690 aaKnown RBP19.05■□□□□ 0.64
IDH3A-219ENST00000560414 TCIRG1Q13488 830 aa19.04■□□□□ 0.64
IDH3A-219ENST00000560414 CCDC27Q2M243 656 aa19.04■□□□□ 0.64
IDH3A-219ENST00000560414 OLFM4Q6UX06 510 aa19.04■□□□□ 0.64
IDH3A-219ENST00000560414 C3orf67Q6ZVT6 689 aa19.04■□□□□ 0.64
IDH3A-219ENST00000560414 UTP14AQ9BVJ6 771 aaKnown RBP19.04■□□□□ 0.64
IDH3A-219ENST00000560414 CRY2Q49AN0 593 aa19.03■□□□□ 0.64
IDH3A-219ENST00000560414 HSP90AB3PQ58FF7 597 aa19.03■□□□□ 0.64
IDH3A-219ENST00000560414 ANKRD13DQ6ZTN6 518 aa19.03■□□□□ 0.64
IDH3A-219ENST00000560414 NLRP10Q86W26 655 aa19.03■□□□□ 0.64
IDH3A-219ENST00000560414 TSPYL6Q8N831 410 aa19.03■□□□□ 0.64
IDH3A-219ENST00000560414 HYPKQ9NX55 129 aa19.03■□□□□ 0.64
IDH3A-219ENST00000560414 TAOK2Q9UL54 1235 aa19.03■□□□□ 0.64
IDH3A-219ENST00000560414 ALDH1B1P30837 517 aa19.02■□□□□ 0.64
IDH3A-219ENST00000560414 FAM9BQ8IZU0 186 aa19.02■□□□□ 0.64
IDH3A-219ENST00000560414 SYNE4Q8N205 404 aa19.02■□□□□ 0.64
IDH3A-219ENST00000560414 PLBD2Q8NHP8 589 aa19.02■□□□□ 0.64
IDH3A-219ENST00000560414 TAOK3Q9H2K8 898 aa19.02■□□□□ 0.64
IDH3A-219ENST00000560414 SOGA3Q5TF21 947 aa19.01■□□□□ 0.63
IDH3A-219ENST00000560414 RPGRQ92834 1020 aaKnown RBP19.01■□□□□ 0.63
IDH3A-219ENST00000560414 PHAXQ9H814 394 aaKnown RBP19.01■□□□□ 0.63
IDH3A-219ENST00000560414 FER1L6Q2WGJ9 1857 aa19.01■□□□□ 0.63
IDH3A-219ENST00000560414 CCDC88AQ3V6T2 1871 aa19.01■□□□□ 0.63
IDH3A-219ENST00000560414 CCDC93Q567U6 631 aa19■□□□□ 0.63
IDH3A-219ENST00000560414 ARFGEF2Q9Y6D5 1785 aa19■□□□□ 0.63
IDH3A-219ENST00000560414 RIC1Q4ADV7 1423 aa19■□□□□ 0.63
IDH3A-219ENST00000560414 KDM2BQ8NHM5 1336 aa19■□□□□ 0.63
IDH3A-219ENST00000560414 LTBP3Q9NS15 1303 aa19■□□□□ 0.63
IDH3A-219ENST00000560414 ATP5J2-PTCD1G3V325 749 aa18.99■□□□□ 0.63
IDH3A-219ENST00000560414 SLC10A5Q5PT55 438 aa18.99■□□□□ 0.63
IDH3A-219ENST00000560414 NLRP3Q96P20 1036 aa18.99■□□□□ 0.63
IDH3A-219ENST00000560414 RRAGCQ9HB90 399 aa18.99■□□□□ 0.63
IDH3A-219ENST00000560414 TRMT112Q9UI30 125 aaKnown RBP18.99■□□□□ 0.63
IDH3A-219ENST00000560414 ZC3H4Q9UPT8 1303 aaKnown RBP18.99■□□□□ 0.63
IDH3A-219ENST00000560414 HCLS1P14317 486 aaPredicted RBP18.98■□□□□ 0.63
IDH3A-219ENST00000560414 HOXA10P31260 410 aaPredicted RBP18.98■□□□□ 0.63
IDH3A-219ENST00000560414 SLC51AQ86UW1 340 aa18.98■□□□□ 0.63
IDH3A-219ENST00000560414 RBM17Q96I25 401 aaKnown RBP18.98■□□□□ 0.63
IDH3A-219ENST00000560414 ISCA1Q9BUE6 129 aa18.98■□□□□ 0.63
IDH3A-219ENST00000560414 ANKRD36CQ5JPF3 1778 aa18.97■□□□□ 0.63
IDH3A-219ENST00000560414 GLTPD2A6NH11 291 aa18.97■□□□□ 0.63
IDH3A-219ENST00000560414 TCERG1O14776 1098 aaKnown RBP18.97■□□□□ 0.63
IDH3A-219ENST00000560414 CCDC30Q5VVM6 783 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms