RNA–Protein interactions for RNA: ENST00000560379.1

USP8-210, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 2

Gene USP8, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-210ENST00000560379 NCOA4Q13772 614 aa8.74□□□□□ -1.01
USP8-210ENST00000560379 WDR44Q5JSH3 913 aa8.74□□□□□ -1.01
USP8-210ENST00000560379 ANKMY2Q8IV38 441 aa8.74□□□□□ -1.01
USP8-210ENST00000560379 TRERF1Q96PN7 1200 aa8.74□□□□□ -1.01
USP8-210ENST00000560379 LRRC4BQ9NT99 713 aa8.74□□□□□ -1.01
USP8-210ENST00000560379 ABCC10Q5T3U5 1492 aa8.74□□□□□ -1.01
USP8-210ENST00000560379 FYCO1Q9BQS8 1478 aa8.74□□□□□ -1.01
USP8-210ENST00000560379 WDR7Q9Y4E6 1490 aa8.74□□□□□ -1.01
USP8-210ENST00000560379 CCDC18Q5T9S5 1454 aa8.73□□□□□ -1.01
USP8-210ENST00000560379 ZNF326Q5BKZ1 582 aaKnown RBP8.73□□□□□ -1.01
USP8-210ENST00000560379 TAF7LQ5H9L4 462 aa8.73□□□□□ -1.01
USP8-210ENST00000560379 TAS1R3Q7RTX0 852 aa8.73□□□□□ -1.01
USP8-210ENST00000560379 CCDC125Q86Z20 511 aa8.73□□□□□ -1.01
USP8-210ENST00000560379 ASXL2Q76L83 1435 aa8.72□□□□□ -1.01
USP8-210ENST00000560379 HOXB4P17483 251 aaPredicted RBP8.72□□□□□ -1.01
USP8-210ENST00000560379 SLFNL1Q499Z3 407 aa8.72□□□□□ -1.01
USP8-210ENST00000560379 RNF20Q5VTR2 975 aa8.72□□□□□ -1.01
USP8-210ENST00000560379 OXCT2Q9BYC2 517 aaPredicted RBP8.72□□□□□ -1.01
USP8-210ENST00000560379 MAP3K4Q9Y6R4 1608 aa8.72□□□□□ -1.01
USP8-210ENST00000560379 CFAP43Q8NDM7 1665 aa8.72□□□□□ -1.01
USP8-210ENST00000560379 CASKIN1Q8WXD9 1431 aa8.71□□□□□ -1.01
USP8-210ENST00000560379 KRBA1A5PL33 1030 aa8.71□□□□□ -1.02
USP8-210ENST00000560379 COL8A1P27658 744 aa8.71□□□□□ -1.02
USP8-210ENST00000560379 DPYDQ12882 1025 aa8.71□□□□□ -1.02
USP8-210ENST00000560379 SWI5Q1ZZU3 235 aa8.71□□□□□ -1.02
USP8-210ENST00000560379 PODNQ7Z5L7 613 aa8.71□□□□□ -1.02
USP8-210ENST00000560379 CNKSR1Q969H4 720 aa8.71□□□□□ -1.02
USP8-210ENST00000560379 CCDC85AQ96PX6 553 aaPredicted RBP8.71□□□□□ -1.02
USP8-210ENST00000560379 FHDC1Q9C0D6 1143 aaPredicted RBP8.71□□□□□ -1.02
USP8-210ENST00000560379 GPAMQ9HCL2 828 aa8.71□□□□□ -1.02
USP8-210ENST00000560379 CEP126Q9P2H0 1117 aa8.71□□□□□ -1.02
USP8-210ENST00000560379 LRRIQ1Q96JM4 1722 aa8.71□□□□□ -1.02
USP8-210ENST00000560379 VAMP1P23763 118 aa8.7□□□□□ -1.02
USP8-210ENST00000560379 CENPCQ03188 943 aa8.7□□□□□ -1.02
USP8-210ENST00000560379 PLPP7Q8NBV4 271 aa8.7□□□□□ -1.02
USP8-210ENST00000560379 C1orf216Q8TAB5 229 aa8.7□□□□□ -1.02
USP8-210ENST00000560379 TRIM52Q96A61 297 aa8.7□□□□□ -1.02
USP8-210ENST00000560379 KLRG1Q96E93 195 aa8.7□□□□□ -1.02
USP8-210ENST00000560379 DRC1Q96MC2 740 aa8.7□□□□□ -1.02
USP8-210ENST00000560379 C8orf37Q96NL8 207 aa8.7□□□□□ -1.02
USP8-210ENST00000560379 ESYT1Q9BSJ8 1104 aa8.7□□□□□ -1.02
USP8-210ENST00000560379 CFHR5Q9BXR6 569 aa8.7□□□□□ -1.02
USP8-210ENST00000560379 ATP10BO94823 1461 aa8.7□□□□□ -1.02
USP8-210ENST00000560379 EPRSP07814 1512 aaKnown RBP8.7□□□□□ -1.02
USP8-210ENST00000560379 ABCA9Q8IUA7 1624 aa8.69□□□□□ -1.02
USP8-210ENST00000560379 C2CD2LO14523 706 aa8.69□□□□□ -1.02
USP8-210ENST00000560379 LZTS3O60299 673 aaPredicted RBP8.69□□□□□ -1.02
USP8-210ENST00000560379 PHKA2P46019 1235 aa8.69□□□□□ -1.02
USP8-210ENST00000560379 RNF135Q8IUD6 432 aa8.69□□□□□ -1.02
USP8-210ENST00000560379 OGFOD1Q8N543 542 aa8.69□□□□□ -1.02
USP8-210ENST00000560379 STAU1O95793 577 aaKnown RBP8.68□□□□□ -1.02
USP8-210ENST00000560379 GNRH1P01148 92 aa8.68□□□□□ -1.02
USP8-210ENST00000560379 MAP2K3P46734 347 aa8.68□□□□□ -1.02
USP8-210ENST00000560379 PHTF2Q8N3S3 785 aa8.68□□□□□ -1.02
USP8-210ENST00000560379 SREK1Q8WXA9 508 aaKnown RBP8.68□□□□□ -1.02
USP8-210ENST00000560379 ZNF594Q96JF6 807 aaPredicted RBP8.68□□□□□ -1.02
USP8-210ENST00000560379 ABL1P00519 1130 aa8.67□□□□□ -1.02
USP8-210ENST00000560379 MCCD1P59942 119 aaPredicted RBP8.67□□□□□ -1.02
USP8-210ENST00000560379 TAGLNQ01995 201 aaKnown RBP8.67□□□□□ -1.02
USP8-210ENST00000560379 CDK13Q14004 1512 aaKnown RBP8.67□□□□□ -1.02
USP8-210ENST00000560379 KIF14Q15058 1648 aa8.67□□□□□ -1.02
USP8-210ENST00000560379 C4orf17Q53FE4 359 aa8.67□□□□□ -1.02
USP8-210ENST00000560379 PPRC1Q5VV67 1664 aaKnown RBP8.67□□□□□ -1.02
USP8-210ENST00000560379 XAGE2Q96GT9 111 aa8.67□□□□□ -1.02
USP8-210ENST00000560379 TEX14Q8IWB6 1497 aa8.66□□□□□ -1.02
USP8-210ENST00000560379 CLDN10P78369 228 aa8.66□□□□□ -1.02
USP8-210ENST00000560379 EML3Q32P44 896 aa8.66□□□□□ -1.02
USP8-210ENST00000560379 TSGA10IPQ3SY00 556 aa8.66□□□□□ -1.02
USP8-210ENST00000560379 FBXO33Q7Z6M2 555 aa8.66□□□□□ -1.02
USP8-210ENST00000560379 GALNT6Q8NCL4 622 aa8.66□□□□□ -1.02
USP8-210ENST00000560379 RUBCNLQ9H714 662 aa8.66□□□□□ -1.02
USP8-210ENST00000560379 NDFIP2Q9NV92 336 aa8.66□□□□□ -1.02
USP8-210ENST00000560379 EGFL7Q9UHF1 273 aa8.66□□□□□ -1.02
USP8-210ENST00000560379 NSFL1CQ9UNZ2 370 aaKnown RBP8.66□□□□□ -1.02
USP8-210ENST00000560379 CFAP74Q9C0B2 1584 aa8.65□□□□□ -1.02
USP8-210ENST00000560379 VPS8Q8N3P4 1428 aa8.65□□□□□ -1.02
USP8-210ENST00000560379 A0A1B0GTH6 734 aa8.65□□□□□ -1.02
USP8-210ENST00000560379 H3BRB1 525 aa8.65□□□□□ -1.02
USP8-210ENST00000560379 PRMT3O60678 531 aa8.65□□□□□ -1.02
USP8-210ENST00000560379 ZC3H6P61129 1189 aaKnown RBP8.65□□□□□ -1.02
USP8-210ENST00000560379 ZNF211Q13398 564 aaPredicted RBP8.65□□□□□ -1.02
USP8-210ENST00000560379 ZNF592Q92610 1267 aa8.65□□□□□ -1.02
USP8-210ENST00000560379 ZSCAN10Q96SZ4 725 aaPredicted RBP8.65□□□□□ -1.02
USP8-210ENST00000560379 SUV39H2Q9H5I1 410 aa8.65□□□□□ -1.02
USP8-210ENST00000560379 TUT1Q9H6E5 874 aaKnown RBP8.65□□□□□ -1.02
USP8-210ENST00000560379 ANO2Q9NQ90 1003 aa8.65□□□□□ -1.02
USP8-210ENST00000560379 DNAAF2Q9NVR5 837 aaKnown RBP8.65□□□□□ -1.02
USP8-210ENST00000560379 HCN2Q9UL51 889 aa8.65□□□□□ -1.02
USP8-210ENST00000560379 MAGI3Q5TCQ9 1506 aa8.64□□□□□ -1.03
USP8-210ENST00000560379 ARAP3Q8WWN8 1544 aa8.64□□□□□ -1.03
USP8-210ENST00000560379 RECKO95980 971 aa8.64□□□□□ -1.03
USP8-210ENST00000560379 BAG6P46379 1132 aa8.64□□□□□ -1.03
USP8-210ENST00000560379 MAP7D1Q3KQU3 841 aa8.64□□□□□ -1.03
USP8-210ENST00000560379 LINC00114Q6XXX2 140 aa8.64□□□□□ -1.03
USP8-210ENST00000560379 TRIM50Q86XT4 487 aa8.64□□□□□ -1.03
USP8-210ENST00000560379 EDARADDQ8WWZ3 215 aa8.64□□□□□ -1.03
USP8-210ENST00000560379 CHIC2Q9UKJ5 165 aa8.64□□□□□ -1.03
USP8-210ENST00000560379 EHBP1L1Q8N3D4 1523 aa8.64□□□□□ -1.03
USP8-210ENST00000560379 MYO5CQ9NQX4 1742 aa8.63□□□□□ -1.03
USP8-210ENST00000560379 PPM1GO15355 546 aaPredicted RBP8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms