RNA–Protein interactions for RNA: ENST00000560328.1

NEO1-208, Transcript of neogenin 1, human

TSL 1 (best)

Gene NEO1, Length 5,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEO1-208	ENST00000560328	MFSD6	Q6ZSS7	791 aa		10.89	□□□□□ -0.67
NEO1-208	ENST00000560328	ANKRD18A	Q8IVF6	992 aa		10.89	□□□□□ -0.67
NEO1-208	ENST00000560328	PTPRT	O14522	1441 aa		10.89	□□□□□ -0.67
NEO1-208	ENST00000560328	FILIP1	Q7Z7B0	1213 aa		10.89	□□□□□ -0.67
NEO1-208	ENST00000560328	DZIP3	Q86Y13	1208 aa	Known RBP	10.89	□□□□□ -0.67
NEO1-208	ENST00000560328	CCDC144CP	Q8IYA2	1237 aa		10.89	□□□□□ -0.67
NEO1-208	ENST00000560328	TRIM35	Q9UPQ4	493 aa		10.89	□□□□□ -0.67
NEO1-208	ENST00000560328	TMEM2	Q9UHN6	1383 aa		10.89	□□□□□ -0.67
NEO1-208	ENST00000560328	RUFY1	Q96T51	708 aa		10.89	□□□□□ -0.67
NEO1-208	ENST00000560328	GDPD2	Q9HCC8	539 aa		10.89	□□□□□ -0.67
NEO1-208	ENST00000560328	PCDH11X	Q9BZA7	1347 aa		10.89	□□□□□ -0.67
NEO1-208	ENST00000560328	PCDH11Y	Q9BZA8	1340 aa		10.89	□□□□□ -0.67
NEO1-208	ENST00000560328	GCC2	Q8IWJ2	1684 aa		10.89	□□□□□ -0.67
NEO1-208	ENST00000560328	G2E3	Q7L622	706 aa		10.89	□□□□□ -0.67
NEO1-208	ENST00000560328	TMX3	Q96JJ7	454 aa		10.89	□□□□□ -0.67
NEO1-208	ENST00000560328	TFIP11	Q9UBB9	837 aa	Known RBP	10.89	□□□□□ -0.67
NEO1-208	ENST00000560328	ZFY	P08048	801 aa	Predicted RBP	10.88	□□□□□ -0.67
NEO1-208	ENST00000560328	C8orf34	Q49A92	452 aa		10.88	□□□□□ -0.67
NEO1-208	ENST00000560328	SOS1	Q07889	1333 aa	Predicted RBP	10.88	□□□□□ -0.67
NEO1-208	ENST00000560328	ABCA8	O94911	1581 aa		10.88	□□□□□ -0.67
NEO1-208	ENST00000560328	BAG3	O95817	575 aa		10.88	□□□□□ -0.67
NEO1-208	ENST00000560328	SPTY2D1	Q68D10	685 aa	Predicted RBP	10.88	□□□□□ -0.67
NEO1-208	ENST00000560328	ZBTB7B	O15156	539 aa	Predicted RBP	10.88	□□□□□ -0.67
NEO1-208	ENST00000560328	PPFIA3	O75145	1194 aa		10.88	□□□□□ -0.67
NEO1-208	ENST00000560328	IARS	P41252	1262 aa	Known RBP	10.88	□□□□□ -0.67
NEO1-208	ENST00000560328	TEX35	Q5T0J7	233 aa		10.88	□□□□□ -0.67
NEO1-208	ENST00000560328	RAB11FIP4	Q86YS3	637 aa		10.88	□□□□□ -0.67
NEO1-208	ENST00000560328	UTP14A	Q9BVJ6	771 aa	Known RBP	10.88	□□□□□ -0.67
NEO1-208	ENST00000560328	ST5	P78524	1137 aa		10.88	□□□□□ -0.67
NEO1-208	ENST00000560328	SYCP1	Q15431	976 aa		10.88	□□□□□ -0.67
NEO1-208	ENST00000560328	CCDC96	Q2M329	555 aa		10.88	□□□□□ -0.67
NEO1-208	ENST00000560328	MICU3	Q86XE3	530 aa		10.88	□□□□□ -0.67
NEO1-208	ENST00000560328	SMC5	Q8IY18	1101 aa		10.88	□□□□□ -0.67
NEO1-208	ENST00000560328	BTG4	Q9NY30	223 aa		10.88	□□□□□ -0.67
NEO1-208	ENST00000560328	RBM8A	Q9Y5S9	174 aa	Known RBP	10.88	□□□□□ -0.67
NEO1-208	ENST00000560328	MCMDC2	Q4G0Z9	681 aa		10.87	□□□□□ -0.67
NEO1-208	ENST00000560328	ZFYVE16	Q7Z3T8	1539 aa		10.87	□□□□□ -0.67
NEO1-208	ENST00000560328	NLRP5	P59047	1200 aa		10.87	□□□□□ -0.67
NEO1-208	ENST00000560328	BRF1	Q92994	677 aa		10.87	□□□□□ -0.67
NEO1-208	ENST00000560328	NLRP3	Q96P20	1036 aa		10.87	□□□□□ -0.67
NEO1-208	ENST00000560328	DEF6	Q9H4E7	631 aa		10.87	□□□□□ -0.67
NEO1-208	ENST00000560328	DDX21	Q9NR30	783 aa	Known RBP eCLIP	10.87	□□□□□ -0.67
NEO1-208	ENST00000560328	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	10.87	□□□□□ -0.67
NEO1-208	ENST00000560328	YEATS2	Q9ULM3	1422 aa		10.87	□□□□□ -0.67
NEO1-208	ENST00000560328	MCM5	P33992	734 aa		10.87	□□□□□ -0.67
NEO1-208	ENST00000560328	PDE4B	Q07343	736 aa		10.87	□□□□□ -0.67
NEO1-208	ENST00000560328	ZNF771	Q7L3S4	317 aa	Predicted RBP	10.87	□□□□□ -0.67
NEO1-208	ENST00000560328	ACBD3	Q9H3P7	528 aa		10.87	□□□□□ -0.67
NEO1-208	ENST00000560328	ORC3	Q9UBD5	711 aa	Predicted RBP	10.87	□□□□□ -0.67
NEO1-208	ENST00000560328	TSPY2	A6NKD2	308 aa		10.87	□□□□□ -0.67
NEO1-208	ENST00000560328	LTK	P29376	864 aa		10.87	□□□□□ -0.67
NEO1-208	ENST00000560328	METAP2	P50579	478 aa	Known RBP eCLIP	10.87	□□□□□ -0.67
NEO1-208	ENST00000560328	IL27	Q8NEV9	243 aa		10.87	□□□□□ -0.67
NEO1-208	ENST00000560328	ZNF622	Q969S3	477 aa	Known RBP eCLIP	10.87	□□□□□ -0.67
NEO1-208	ENST00000560328	BAG4	O95429	457 aa	Known RBP	10.87	□□□□□ -0.67
NEO1-208	ENST00000560328	SLC4A8	Q2Y0W8	1093 aa		10.87	□□□□□ -0.67
NEO1-208	ENST00000560328	ZNF790	Q6PG37	636 aa		10.87	□□□□□ -0.67
NEO1-208	ENST00000560328	NECAB1	Q8N987	351 aa		10.87	□□□□□ -0.67
NEO1-208	ENST00000560328	ANO10	Q9NW15	660 aa		10.87	□□□□□ -0.67
NEO1-208	ENST00000560328	TTC41P	Q6P2S7	1318 aa		10.87	□□□□□ -0.67
NEO1-208	ENST00000560328	MYO5C	Q9NQX4	1742 aa		10.86	□□□□□ -0.67
NEO1-208	ENST00000560328	CHL1	O00533	1208 aa		10.86	□□□□□ -0.67
NEO1-208	ENST00000560328	CFAP100	Q494V2	611 aa		10.86	□□□□□ -0.67
NEO1-208	ENST00000560328	PLEKHM2	Q8IWE5	1019 aa		10.86	□□□□□ -0.67
NEO1-208	ENST00000560328	TCEANC2	Q96MN5	208 aa		10.86	□□□□□ -0.67
NEO1-208	ENST00000560328	BICC1	Q9H694	974 aa	Known RBP	10.86	□□□□□ -0.67
NEO1-208	ENST00000560328	LGR6	Q9HBX8	967 aa		10.86	□□□□□ -0.67
NEO1-208	ENST00000560328	PLEKHG3	A1L390	1219 aa		10.86	□□□□□ -0.67
NEO1-208	ENST00000560328	CYP7A1	P22680	504 aa		10.86	□□□□□ -0.67
NEO1-208	ENST00000560328	ANAPC15	P60006	121 aa		10.86	□□□□□ -0.67
NEO1-208	ENST00000560328	NMI	Q13287	307 aa	Predicted RBP	10.86	□□□□□ -0.67
NEO1-208	ENST00000560328	HSP90B2P	Q58FF3	399 aa		10.86	□□□□□ -0.67
NEO1-208	ENST00000560328	BABAM1	Q9NWV8	329 aa		10.86	□□□□□ -0.67
NEO1-208	ENST00000560328	CCDC194	A0A1B0GVG4	234 aa		10.86	□□□□□ -0.67
NEO1-208	ENST00000560328	SLC9C2	Q5TAH2	1124 aa		10.86	□□□□□ -0.67
NEO1-208	ENST00000560328	CKAP2L	Q8IYA6	745 aa		10.86	□□□□□ -0.67
NEO1-208	ENST00000560328	LRRC2	Q9BYS8	371 aa		10.86	□□□□□ -0.67
NEO1-208	ENST00000560328	CRNKL1	Q9BZJ0	848 aa	Known RBP	10.86	□□□□□ -0.67
NEO1-208	ENST00000560328	PAG1	Q9NWQ8	432 aa		10.86	□□□□□ -0.67
NEO1-208	ENST00000560328	TFCP2	Q12800	502 aa		10.86	□□□□□ -0.67
NEO1-208	ENST00000560328	WWC2	Q6AWC2	1192 aa		10.86	□□□□□ -0.67
NEO1-208	ENST00000560328	IRS4	O14654	1257 aa	Predicted RBP	10.85	□□□□□ -0.67
NEO1-208	ENST00000560328	FAM177A1	Q8N128	213 aa	Predicted RBP	10.85	□□□□□ -0.67
NEO1-208	ENST00000560328	FSIP1	Q8NA03	581 aa		10.85	□□□□□ -0.67
NEO1-208	ENST00000560328	KAT14	Q9H8E8	782 aa		10.85	□□□□□ -0.67
NEO1-208	ENST00000560328	ZMYM4	Q5VZL5	1548 aa		10.85	□□□□□ -0.67
NEO1-208	ENST00000560328	CFAP65	Q6ZU64	1925 aa	Known RBP	10.85	□□□□□ -0.67
NEO1-208	ENST00000560328	KIF5B	P33176	963 aa		10.85	□□□□□ -0.67
NEO1-208	ENST00000560328	CNKSR2	Q8WXI2	1034 aa		10.85	□□□□□ -0.67
NEO1-208	ENST00000560328	KLF18	A0A0U1RQI7	1052 aa		10.85	□□□□□ -0.67
NEO1-208	ENST00000560328	NOM1	Q5C9Z4	860 aa	Known RBP	10.85	□□□□□ -0.67
NEO1-208	ENST00000560328	LUC7L	Q9NQ29	371 aa	Known RBP	10.85	□□□□□ -0.67
NEO1-208	ENST00000560328	SLC4A4	Q9Y6R1	1079 aa		10.85	□□□□□ -0.67
NEO1-208	ENST00000560328	SLC26A6	Q9BXS9	759 aa		10.84	□□□□□ -0.67
NEO1-208	ENST00000560328	ESPN	B1AK53	854 aa		10.84	□□□□□ -0.67
NEO1-208	ENST00000560328	KLHL10	Q6JEL2	608 aa		10.84	□□□□□ -0.67
NEO1-208	ENST00000560328	PDCL3	Q9H2J4	239 aa		10.84	□□□□□ -0.67
NEO1-208	ENST00000560328	CTAGE5	O15320	804 aa		10.84	□□□□□ -0.67
NEO1-208	ENST00000560328	GSTO1	P78417	241 aa		10.84	□□□□□ -0.67
NEO1-208	ENST00000560328	SAMD9L	Q8IVG5	1584 aa		10.84	□□□□□ -0.67

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