RNA–Protein interactions for RNA: ENST00000560321.5

KNSTRN-210, Transcript of kinetochore localized astrin (SPAG5) binding protein, humanhuman

TSL 3

Gene KNSTRN, Length 940 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNSTRN-210ENST00000560321 KRT24Q2M2I5 525 aa25.52■■□□□ 1.68
KNSTRN-210ENST00000560321 ERFEQ4G0M1 354 aa25.52■■□□□ 1.68
KNSTRN-210ENST00000560321 SUSD4Q5VX71 490 aa25.52■■□□□ 1.68
KNSTRN-210ENST00000560321 LRP10Q7Z4F1 713 aa25.52■■□□□ 1.68
KNSTRN-210ENST00000560321 NLRP3Q96P20 1036 aa25.52■■□□□ 1.68
KNSTRN-210ENST00000560321 CCDC27Q2M243 656 aa25.51■■□□□ 1.67
KNSTRN-210ENST00000560321 GRIPAP1Q4V328 841 aa25.51■■□□□ 1.67
KNSTRN-210ENST00000560321 CC2D2BQ6DHV5 1058 aa25.51■■□□□ 1.67
KNSTRN-210ENST00000560321 RBM17Q96I25 401 aaKnown RBP25.51■■□□□ 1.67
KNSTRN-210ENST00000560321 UBN2Q6ZU65 1347 aa25.51■■□□□ 1.67
KNSTRN-210ENST00000560321 CRY2Q49AN0 593 aa25.5■■□□□ 1.67
KNSTRN-210ENST00000560321 NCBP3Q53F19 620 aaKnown RBP25.5■■□□□ 1.67
KNSTRN-210ENST00000560321 PLBD2Q8NHP8 589 aa25.5■■□□□ 1.67
KNSTRN-210ENST00000560321 GLTPD2A6NH11 291 aa25.49■■□□□ 1.67
KNSTRN-210ENST00000560321 TCIRG1Q13488 830 aa25.49■■□□□ 1.67
KNSTRN-210ENST00000560321 ANKRD13DQ6ZTN6 518 aa25.49■■□□□ 1.67
KNSTRN-210ENST00000560321 NMRK2Q9NPI5 230 aa25.49■■□□□ 1.67
KNSTRN-210ENST00000560321 NTSR2O95665 410 aa25.48■■□□□ 1.67
KNSTRN-210ENST00000560321 ABCC12Q96J65 1359 aa25.47■■□□□ 1.67
KNSTRN-210ENST00000560321 HOXA10P31260 410 aaPredicted RBP25.46■■□□□ 1.67
KNSTRN-210ENST00000560321 GOLGA2Q08379 1002 aa25.46■■□□□ 1.67
KNSTRN-210ENST00000560321 CCDC184Q52MB2 194 aa25.46■■□□□ 1.67
KNSTRN-210ENST00000560321 CCDC30Q5VVM6 783 aa25.46■■□□□ 1.67
KNSTRN-210ENST00000560321 TRMT112Q9UI30 125 aaKnown RBP25.46■■□□□ 1.67
KNSTRN-210ENST00000560321 SH3TC1Q8TE82 1336 aa25.45■■□□□ 1.66
KNSTRN-210ENST00000560321 VEGFAP15692 232 aaPredicted RBP25.45■■□□□ 1.66
KNSTRN-210ENST00000560321 FKBP4Q02790 459 aaKnown RBP eCLIP25.45■■□□□ 1.66
KNSTRN-210ENST00000560321 SLC10A5Q5PT55 438 aa25.45■■□□□ 1.66
KNSTRN-210ENST00000560321 RBM46Q8TBY0 533 aaKnown RBP25.45■■□□□ 1.66
KNSTRN-210ENST00000560321 C7orf43Q8WVR3 580 aa25.45■■□□□ 1.66
KNSTRN-210ENST00000560321 CRAMP1Q96RY5 1269 aa25.45■■□□□ 1.66
KNSTRN-210ENST00000560321 RRAGCQ9HB90 399 aa25.45■■□□□ 1.66
KNSTRN-210ENST00000560321 DDX58O95786 925 aaKnown RBP25.44■■□□□ 1.66
KNSTRN-210ENST00000560321 HSPA6P17066 643 aa25.44■■□□□ 1.66
KNSTRN-210ENST00000560321 NLRP10Q86W26 655 aa25.44■■□□□ 1.66
KNSTRN-210ENST00000560321 CACNA1FO60840 1977 aa25.44■■□□□ 1.66
KNSTRN-210ENST00000560321 IL16Q14005 1332 aa25.43■■□□□ 1.66
KNSTRN-210ENST00000560321 ELL2O00472 640 aaPredicted RBP25.43■■□□□ 1.66
KNSTRN-210ENST00000560321 HSP90B1P14625 803 aaKnown RBP25.43■■□□□ 1.66
KNSTRN-210ENST00000560321 RIC3Q7Z5B4 369 aa25.43■■□□□ 1.66
KNSTRN-210ENST00000560321 WWC1Q8IX03 1113 aa25.43■■□□□ 1.66
KNSTRN-210ENST00000560321 STK31Q9BXU1 1019 aa25.42■■□□□ 1.66
KNSTRN-210ENST00000560321 FSTL1Q12841 308 aa25.41■■□□□ 1.66
KNSTRN-210ENST00000560321 PRELPP51888 382 aa25.4■■□□□ 1.66
KNSTRN-210ENST00000560321 LAMB2P55268 1798 aa25.39■■□□□ 1.66
KNSTRN-210ENST00000560321 PPEF1O14829 653 aaPredicted RBP25.39■■□□□ 1.66
KNSTRN-210ENST00000560321 PSMD1Q99460 953 aa25.39■■□□□ 1.66
KNSTRN-210ENST00000560321 WDR90Q96KV7 1748 aa25.38■■□□□ 1.65
KNSTRN-210ENST00000560321 DDX46Q7L014 1031 aaKnown RBP25.38■■□□□ 1.65
KNSTRN-210ENST00000560321 C8orf58Q8NAV2 365 aa25.38■■□□□ 1.65
KNSTRN-210ENST00000560321 SMC1BQ8NDV3 1235 aa25.38■■□□□ 1.65
KNSTRN-210ENST00000560321 JDP2Q8WYK2 163 aa25.38■■□□□ 1.65
KNSTRN-210ENST00000560321 BBOX1O75936 387 aa25.37■■□□□ 1.65
KNSTRN-210ENST00000560321 IARSP41252 1262 aaKnown RBP25.37■■□□□ 1.65
KNSTRN-210ENST00000560321 APLP1P51693 650 aa25.37■■□□□ 1.65
KNSTRN-210ENST00000560321 WDR63Q8IWG1 891 aa25.37■■□□□ 1.65
KNSTRN-210ENST00000560321 SYNE4Q8N205 404 aa25.37■■□□□ 1.65
KNSTRN-210ENST00000560321 IQCA1LA6NCM1 817 aa25.36■■□□□ 1.65
KNSTRN-210ENST00000560321 TRIM28Q13263 835 aaKnown RBP25.36■■□□□ 1.65
KNSTRN-210ENST00000560321 ISCA1Q9BUE6 129 aa25.36■■□□□ 1.65
KNSTRN-210ENST00000560321 ZNF277Q9NRM2 450 aaPredicted RBP25.36■■□□□ 1.65
KNSTRN-210ENST00000560321 TMC4Q7Z404 712 aa25.35■■□□□ 1.65
KNSTRN-210ENST00000560321 FAM9BQ8IZU0 186 aa25.35■■□□□ 1.65
KNSTRN-210ENST00000560321 TSR2Q969E8 191 aaKnown RBP25.35■■□□□ 1.65
KNSTRN-210ENST00000560321 SCN4AP35499 1836 aa25.35■■□□□ 1.65
KNSTRN-210ENST00000560321 ATP5J2-PTCD1G3V325 749 aa25.34■■□□□ 1.65
KNSTRN-210ENST00000560321 HCLS1P14317 486 aaPredicted RBP25.34■■□□□ 1.65
KNSTRN-210ENST00000560321 TWISTNBQ3B726 338 aaPredicted RBP25.34■■□□□ 1.65
KNSTRN-210ENST00000560321 SUPT20HQ8NEM7 779 aa25.34■■□□□ 1.65
KNSTRN-210ENST00000560321 VPS33BQ9H267 617 aa25.33■■□□□ 1.65
KNSTRN-210ENST00000560321 PHAXQ9H814 394 aaKnown RBP25.33■■□□□ 1.65
KNSTRN-210ENST00000560321 ATP6V0A2Q9Y487 856 aa25.33■■□□□ 1.65
KNSTRN-210ENST00000560321 TCERG1O14776 1098 aaKnown RBP25.32■■□□□ 1.64
KNSTRN-210ENST00000560321 NEXNQ0ZGT2 675 aa25.32■■□□□ 1.64
KNSTRN-210ENST00000560321 ABCC4O15439 1325 aa25.32■■□□□ 1.64
KNSTRN-210ENST00000560321 DDX60Q8IY21 1712 aaKnown RBP25.32■■□□□ 1.64
KNSTRN-210ENST00000560321 OLFM4Q6UX06 510 aa25.31■■□□□ 1.64
KNSTRN-210ENST00000560321 CCDC191Q8NCU4 936 aa25.31■■□□□ 1.64
KNSTRN-210ENST00000560321 SALL2Q9Y467 1007 aaPredicted RBP25.31■■□□□ 1.64
KNSTRN-210ENST00000560321 EIF6P56537 245 aaKnown RBP25.3■■□□□ 1.64
KNSTRN-210ENST00000560321 GRAPQ13588 217 aa25.3■■□□□ 1.64
KNSTRN-210ENST00000560321 C3orf67Q6ZVT6 689 aa25.3■■□□□ 1.64
KNSTRN-210ENST00000560321 SP8Q8IXZ3 490 aa25.3■■□□□ 1.64
KNSTRN-210ENST00000560321 LARGE2Q8N3Y3 721 aa25.3■■□□□ 1.64
KNSTRN-210ENST00000560321 ZBTB38Q8NAP3 1195 aaPredicted RBP25.3■■□□□ 1.64
KNSTRN-210ENST00000560321 GRAPLQ8TC17 118 aaPredicted RBP25.3■■□□□ 1.64
KNSTRN-210ENST00000560321 FAM89AQ96GI7 184 aa25.3■■□□□ 1.64
KNSTRN-210ENST00000560321 MYD88Q99836 296 aa25.3■■□□□ 1.64
KNSTRN-210ENST00000560321 MYH16Q9H6N6 1097 aa25.3■■□□□ 1.64
KNSTRN-210ENST00000560321 DDNO94850 711 aaPredicted RBP25.29■■□□□ 1.64
KNSTRN-210ENST00000560321 TSPYL6Q8N831 410 aa25.29■■□□□ 1.64
KNSTRN-210ENST00000560321 CWC25Q9NXE8 425 aaPredicted RBP25.29■■□□□ 1.64
KNSTRN-210ENST00000560321 IRS4O14654 1257 aaPredicted RBP25.28■■□□□ 1.64
KNSTRN-210ENST00000560321 KSR2Q6VAB6 950 aa25.28■■□□□ 1.64
KNSTRN-210ENST00000560321 METTL22Q9BUU2 404 aaPredicted RBP25.28■■□□□ 1.64
KNSTRN-210ENST00000560321 SF3B3Q15393 1217 aaKnown RBP25.27■■□□□ 1.64
KNSTRN-210ENST00000560321 DPP8Q6V1X1 898 aaPredicted RBP25.27■■□□□ 1.64
KNSTRN-210ENST00000560321 NIM1KQ8IY84 436 aa25.27■■□□□ 1.64
KNSTRN-210ENST00000560321 L3MBTL3Q96JM7 780 aaPredicted RBP25.27■■□□□ 1.64
KNSTRN-210ENST00000560321 FZD9O00144 591 aa25.26■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms