RNA–Protein interactions for RNA: ENST00000560299.1

SPG11-221, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 437 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-221ENST00000560299 F6X3S4 739 aa8.08□□□□□ -1.12
SPG11-221ENST00000560299 ZBTB7BO15156 539 aaPredicted RBP8.08□□□□□ -1.12
SPG11-221ENST00000560299 ALDH1L1O75891 902 aa8.08□□□□□ -1.12
SPG11-221ENST00000560299 CRKLP46109 303 aaKnown RBP8.08□□□□□ -1.12
SPG11-221ENST00000560299 POTEGQ6S5H5 508 aa8.08□□□□□ -1.12
SPG11-221ENST00000560299 CLEC4GQ6UXB4 293 aa8.08□□□□□ -1.12
SPG11-221ENST00000560299 COL23A1Q86Y22 540 aaPredicted RBP8.08□□□□□ -1.12
SPG11-221ENST00000560299 LINS1Q8NG48 757 aa8.08□□□□□ -1.12
SPG11-221ENST00000560299 ARXQ96QS3 562 aa8.08□□□□□ -1.12
SPG11-221ENST00000560299 RWDD1Q9H446 243 aaPredicted RBP8.08□□□□□ -1.12
SPG11-221ENST00000560299 ZBTB40Q9NUA8 1239 aa8.08□□□□□ -1.12
SPG11-221ENST00000560299 MAP3K2Q9Y2U5 619 aa8.08□□□□□ -1.12
SPG11-221ENST00000560299 ZNF330Q9Y3S2 320 aaPredicted RBP8.08□□□□□ -1.12
SPG11-221ENST00000560299 NBPF26B4DH59 902 aa8.07□□□□□ -1.12
SPG11-221ENST00000560299 HSP90AB3PQ58FF7 597 aa8.07□□□□□ -1.12
SPG11-221ENST00000560299 B4GALNT3Q6L9W6 998 aa8.07□□□□□ -1.12
SPG11-221ENST00000560299 NBPF10Q6P3W6 841 aaKnown RBP8.07□□□□□ -1.12
SPG11-221ENST00000560299 NBPF15Q8N660 670 aa8.07□□□□□ -1.12
SPG11-221ENST00000560299 METTL22Q9BUU2 404 aaPredicted RBP8.07□□□□□ -1.12
SPG11-221ENST00000560299 NARFQ9UHQ1 456 aa8.07□□□□□ -1.12
SPG11-221ENST00000560299 USP42Q9H9J4 1324 aaKnown RBP8.06□□□□□ -1.12
SPG11-221ENST00000560299 TUBGCP6Q96RT7 1819 aa8.06□□□□□ -1.12
SPG11-221ENST00000560299 ATP10DQ9P241 1426 aa8.06□□□□□ -1.12
SPG11-221ENST00000560299 ERVV-1B6SEH8 477 aa8.06□□□□□ -1.12
SPG11-221ENST00000560299 GNPATO15228 680 aa8.06□□□□□ -1.12
SPG11-221ENST00000560299 UBTFL1P0CB47 393 aaPredicted RBP8.06□□□□□ -1.12
SPG11-221ENST00000560299 POLD1P28340 1107 aa8.06□□□□□ -1.12
SPG11-221ENST00000560299 PIP4K2AP48426 406 aaPredicted RBP8.06□□□□□ -1.12
SPG11-221ENST00000560299 BEND3Q5T5X7 828 aa8.06□□□□□ -1.12
SPG11-221ENST00000560299 LRP10Q7Z4F1 713 aa8.06□□□□□ -1.12
SPG11-221ENST00000560299 ARHGEF1Q92888 912 aaKnown RBP8.06□□□□□ -1.12
SPG11-221ENST00000560299 C9orf78Q9NZ63 289 aaPredicted RBP8.06□□□□□ -1.12
SPG11-221ENST00000560299 ZBTB1Q9Y2K1 713 aa8.06□□□□□ -1.12
SPG11-221ENST00000560299 CD2APQ9Y5K6 639 aa8.06□□□□□ -1.12
SPG11-221ENST00000560299 ADCY9O60503 1353 aa8.06□□□□□ -1.12
SPG11-221ENST00000560299 MAP3K15Q6ZN16 1313 aa8.05□□□□□ -1.12
SPG11-221ENST00000560299 PSDA5PKW4 1024 aaPredicted RBP8.05□□□□□ -1.12
SPG11-221ENST00000560299 HMMRO75330 724 aa8.05□□□□□ -1.12
SPG11-221ENST00000560299 GNAI2P04899 355 aa8.05□□□□□ -1.12
SPG11-221ENST00000560299 RFC4P35249 363 aa8.05□□□□□ -1.12
SPG11-221ENST00000560299 CENPQQ7L2Z9 268 aaPredicted RBP8.05□□□□□ -1.12
SPG11-221ENST00000560299 DZIP3Q86Y13 1208 aaKnown RBP8.05□□□□□ -1.12
SPG11-221ENST00000560299 RPAP2Q8IXW5 612 aaPredicted RBP8.05□□□□□ -1.12
SPG11-221ENST00000560299 MYD88Q99836 296 aa8.05□□□□□ -1.12
SPG11-221ENST00000560299 PDZRN3Q9UPQ7 1066 aa8.05□□□□□ -1.12
SPG11-221ENST00000560299 ZNF652Q9Y2D9 606 aa8.05□□□□□ -1.12
SPG11-221ENST00000560299 IBTKQ9P2D0 1353 aaPredicted RBP8.05□□□□□ -1.12
SPG11-221ENST00000560299 NEURL1BA8MQ27 555 aa8.04□□□□□ -1.12
SPG11-221ENST00000560299 POTEB2H3BUK9 544 aa8.04□□□□□ -1.12
SPG11-221ENST00000560299 GALR2O43603 387 aaPredicted RBP8.04□□□□□ -1.12
SPG11-221ENST00000560299 GYS1P13807 737 aa8.04□□□□□ -1.12
SPG11-221ENST00000560299 TM4SF1P30408 202 aa8.04□□□□□ -1.12
SPG11-221ENST00000560299 TCIRG1Q13488 830 aa8.04□□□□□ -1.12
SPG11-221ENST00000560299 GIGYF2Q6Y7W6 1299 aaKnown RBP8.04□□□□□ -1.12
SPG11-221ENST00000560299 TTLL7Q6ZT98 887 aa8.04□□□□□ -1.12
SPG11-221ENST00000560299 CCDC191Q8NCU4 936 aa8.04□□□□□ -1.12
SPG11-221ENST00000560299 MEIS3Q99687 375 aa8.04□□□□□ -1.12
SPG11-221ENST00000560299 ZBTB3Q9H5J0 574 aa8.04□□□□□ -1.12
SPG11-221ENST00000560299 COL15A1P39059 1388 aa8.04□□□□□ -1.12
SPG11-221ENST00000560299 N4BP2Q86UW6 1770 aaPredicted RBP8.03□□□□□ -1.12
SPG11-221ENST00000560299 ZPR1O75312 459 aa8.03□□□□□ -1.12
SPG11-221ENST00000560299 HSP90B1P14625 803 aaKnown RBP8.03□□□□□ -1.12
SPG11-221ENST00000560299 KCNQ4P56696 695 aa8.03□□□□□ -1.12
SPG11-221ENST00000560299 TRIM28Q13263 835 aaKnown RBP8.03□□□□□ -1.12
SPG11-221ENST00000560299 HDAC1Q13547 482 aaPredicted RBP8.03□□□□□ -1.12
SPG11-221ENST00000560299 GCKRQ14397 625 aa8.03□□□□□ -1.12
SPG11-221ENST00000560299 AMIGO3Q86WK7 504 aa8.03□□□□□ -1.12
SPG11-221ENST00000560299 PDGFDQ9GZP0 370 aaPredicted RBP8.03□□□□□ -1.12
SPG11-221ENST00000560299 USP44Q9H0E7 712 aa8.03□□□□□ -1.12
SPG11-221ENST00000560299 CWC25Q9NXE8 425 aaPredicted RBP8.03□□□□□ -1.12
SPG11-221ENST00000560299 ZBTB47Q9UFB7 747 aaPredicted RBP8.03□□□□□ -1.12
SPG11-221ENST00000560299 PCDHB15Q9Y5E8 787 aa8.03□□□□□ -1.12
SPG11-221ENST00000560299 C4AP0C0L4 1744 aa8.03□□□□□ -1.12
SPG11-221ENST00000560299 KIF13BQ9NQT8 1826 aa8.02□□□□□ -1.13
SPG11-221ENST00000560299 GRM8O00222 908 aa8.02□□□□□ -1.13
SPG11-221ENST00000560299 IGKV5-2P06315 115 aa8.02□□□□□ -1.13
SPG11-221ENST00000560299 TGFB2P61812 414 aa8.02□□□□□ -1.13
SPG11-221ENST00000560299 CWF19L2Q2TBE0 894 aaKnown RBP8.02□□□□□ -1.13
SPG11-221ENST00000560299 GCC1Q96CN9 775 aa8.02□□□□□ -1.13
SPG11-221ENST00000560299 TBC1D2BQ9UPU7 963 aa8.02□□□□□ -1.13
SPG11-221ENST00000560299 RIC1Q4ADV7 1423 aa8.02□□□□□ -1.13
SPG11-221ENST00000560299 ARFGEF2Q9Y6D5 1785 aa8.02□□□□□ -1.13
SPG11-221ENST00000560299 UTYO14607 1347 aa8.02□□□□□ -1.13
SPG11-221ENST00000560299 NRXN2Q9P2S2 1712 aa8.01□□□□□ -1.13
SPG11-221ENST00000560299 ATP5J2-PTCD1G3V325 749 aa8.01□□□□□ -1.13
SPG11-221ENST00000560299 ZBTB7AO95365 584 aa8.01□□□□□ -1.13
SPG11-221ENST00000560299 ATP8B2P98198 1209 aa8.01□□□□□ -1.13
SPG11-221ENST00000560299 PARP10Q53GL7 1025 aa8.01□□□□□ -1.13
SPG11-221ENST00000560299 PPP1R42Q7Z4L9 355 aa8.01□□□□□ -1.13
SPG11-221ENST00000560299 ANKRD44Q8N8A2 993 aa8.01□□□□□ -1.13
SPG11-221ENST00000560299 ISCA1Q9BUE6 129 aa8.01□□□□□ -1.13
SPG11-221ENST00000560299 C1orf115Q9H7X2 142 aa8.01□□□□□ -1.13
SPG11-221ENST00000560299 PCDH10Q9P2E7 1040 aa8.01□□□□□ -1.13
SPG11-221ENST00000560299 LRRFIP2Q9Y608 721 aaKnown RBP8.01□□□□□ -1.13
SPG11-221ENST00000560299 SCN7AQ01118 1682 aa8.01□□□□□ -1.13
SPG11-221ENST00000560299 AFDNP55196 1824 aaKnown RBP8.01□□□□□ -1.13
SPG11-221ENST00000560299 KLRG2A4D1S0 409 aaPredicted RBP8□□□□□ -1.13
SPG11-221ENST00000560299 H7C1W4 665 aa8□□□□□ -1.13
SPG11-221ENST00000560299 CAMTA2O94983 1202 aa8□□□□□ -1.13
SPG11-221ENST00000560299 PCCAP05165 728 aaPredicted RBP8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms