RNA–Protein interactions for RNA: ENST00000560205.5

NIPA2-208, Transcript of NIPA magnesium transporter 2, human

TSL 4

Gene NIPA2, Length 589 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NIPA2-208	ENST00000560205	ABCC12	Q96J65	1359 aa		27.87	■■■□□ 2.05
NIPA2-208	ENST00000560205	NFKBIE	O00221	500 aa		27.86	■■■□□ 2.05
NIPA2-208	ENST00000560205	WDR63	Q8IWG1	891 aa		27.86	■■■□□ 2.05
NIPA2-208	ENST00000560205	FAM9B	Q8IZU0	186 aa		27.86	■■■□□ 2.05
NIPA2-208	ENST00000560205	ZNF219	Q9P2Y4	722 aa	Predicted RBP	27.86	■■■□□ 2.05
NIPA2-208	ENST00000560205	LTBP3	Q9NS15	1303 aa		27.86	■■■□□ 2.05
NIPA2-208	ENST00000560205	SLC10A5	Q5PT55	438 aa		27.85	■■■□□ 2.05
NIPA2-208	ENST00000560205	CCDC30	Q5VVM6	783 aa		27.85	■■■□□ 2.05
NIPA2-208	ENST00000560205	C7orf43	Q8WVR3	580 aa		27.85	■■■□□ 2.05
NIPA2-208	ENST00000560205	SENP3-EIF4A1	A0A087X0R7	540 aa		27.84	■■■□□ 2.05
NIPA2-208	ENST00000560205	NLRP10	Q86W26	655 aa		27.84	■■■□□ 2.05
NIPA2-208	ENST00000560205	TNRC6C	Q9HCJ0	1690 aa	Known RBP	27.84	■■■□□ 2.05
NIPA2-208	ENST00000560205	RPGR	Q92834	1020 aa	Known RBP	27.83	■■■□□ 2.05
NIPA2-208	ENST00000560205	TSR2	Q969E8	191 aa	Known RBP	27.83	■■■□□ 2.05
NIPA2-208	ENST00000560205	NLRP3	Q96P20	1036 aa		27.83	■■■□□ 2.05
NIPA2-208	ENST00000560205	HOXA10	P31260	410 aa	Predicted RBP	27.82	■■■□□ 2.04
NIPA2-208	ENST00000560205	TAOK3	Q9H2K8	898 aa		27.82	■■■□□ 2.04
NIPA2-208	ENST00000560205	CCDC93	Q567U6	631 aa		27.81	■■■□□ 2.04
NIPA2-208	ENST00000560205	TSPYL6	Q8N831	410 aa		27.81	■■■□□ 2.04
NIPA2-208	ENST00000560205	KDM2B	Q8NHM5	1336 aa		27.81	■■■□□ 2.04
NIPA2-208	ENST00000560205	DICER1	Q9UPY3	1922 aa	Known RBP	27.8	■■■□□ 2.04
NIPA2-208	ENST00000560205	PRELP	P51888	382 aa		27.8	■■■□□ 2.04
NIPA2-208	ENST00000560205	GOLGA2	Q08379	1002 aa		27.8	■■■□□ 2.04
NIPA2-208	ENST00000560205	RBM17	Q96I25	401 aa	Known RBP	27.8	■■■□□ 2.04
NIPA2-208	ENST00000560205	TRMT112	Q9UI30	125 aa	Known RBP	27.8	■■■□□ 2.04
NIPA2-208	ENST00000560205	SH3TC1	Q8TE82	1336 aa		27.79	■■■□□ 2.04
NIPA2-208	ENST00000560205	RIC3	Q7Z5B4	369 aa		27.79	■■■□□ 2.04
NIPA2-208	ENST00000560205	RTKN2	Q8IZC4	609 aa		27.79	■■■□□ 2.04
NIPA2-208	ENST00000560205	CRAMP1	Q96RY5	1269 aa		27.79	■■■□□ 2.04
NIPA2-208	ENST00000560205	ISCA1	Q9BUE6	129 aa		27.79	■■■□□ 2.04
NIPA2-208	ENST00000560205	PHAX	Q9H814	394 aa	Known RBP	27.79	■■■□□ 2.04
NIPA2-208	ENST00000560205	SALL2	Q9Y467	1007 aa	Predicted RBP	27.79	■■■□□ 2.04
NIPA2-208	ENST00000560205	KIF3C	O14782	793 aa		27.78	■■■□□ 2.04
NIPA2-208	ENST00000560205	TRIM28	Q13263	835 aa	Known RBP	27.78	■■■□□ 2.04
NIPA2-208	ENST00000560205	TWISTNB	Q3B726	338 aa	Predicted RBP	27.78	■■■□□ 2.04
NIPA2-208	ENST00000560205	CC2D2B	Q6DHV5	1058 aa		27.77	■■■□□ 2.04
NIPA2-208	ENST00000560205	DDX58	O95786	925 aa	Known RBP	27.76	■■■□□ 2.03
NIPA2-208	ENST00000560205	GRIPAP1	Q4V328	841 aa		27.76	■■■□□ 2.03
NIPA2-208	ENST00000560205	STK31	Q9BXU1	1019 aa		27.76	■■■□□ 2.03
NIPA2-208	ENST00000560205	FANCI	Q9NVI1	1328 aa		27.74	■■■□□ 2.03
NIPA2-208	ENST00000560205	CACNA1F	O60840	1977 aa		27.74	■■■□□ 2.03
NIPA2-208	ENST00000560205	GLTPD2	A6NH11	291 aa		27.74	■■■□□ 2.03
NIPA2-208	ENST00000560205	FKBP4	Q02790	459 aa	Known RBP eCLIP	27.74	■■■□□ 2.03
NIPA2-208	ENST00000560205	NMRK2	Q9NPI5	230 aa		27.74	■■■□□ 2.03
NIPA2-208	ENST00000560205	TIAM2	Q8IVF5	1701 aa		27.74	■■■□□ 2.03
NIPA2-208	ENST00000560205	ATP5J2-PTCD1	G3V325	749 aa		27.73	■■■□□ 2.03
NIPA2-208	ENST00000560205	DPY19L2	Q6NUT2	758 aa		27.73	■■■□□ 2.03
NIPA2-208	ENST00000560205	C3orf67	Q6ZVT6	689 aa		27.73	■■■□□ 2.03
NIPA2-208	ENST00000560205	HCLS1	P14317	486 aa	Predicted RBP	27.71	■■■□□ 2.03
NIPA2-208	ENST00000560205	SYNE4	Q8N205	404 aa		27.71	■■■□□ 2.03
NIPA2-208	ENST00000560205	MYH16	Q9H6N6	1097 aa		27.71	■■■□□ 2.03
NIPA2-208	ENST00000560205	LAMB2	P55268	1798 aa		27.71	■■■□□ 2.03
NIPA2-208	ENST00000560205	TOMM70	O94826	608 aa		27.7	■■■□□ 2.02
NIPA2-208	ENST00000560205	PSMD1	Q99460	953 aa		27.7	■■■□□ 2.02
NIPA2-208	ENST00000560205	PPEF1	O14829	653 aa	Predicted RBP	27.69	■■■□□ 2.02
NIPA2-208	ENST00000560205	OLFM4	Q6UX06	510 aa		27.69	■■■□□ 2.02
NIPA2-208	ENST00000560205	CCDC191	Q8NCU4	936 aa		27.69	■■■□□ 2.02
NIPA2-208	ENST00000560205	FAM89A	Q96GI7	184 aa		27.69	■■■□□ 2.02
NIPA2-208	ENST00000560205	METTL22	Q9BUU2	404 aa	Predicted RBP	27.69	■■■□□ 2.02
NIPA2-208	ENST00000560205	TMX4	Q9H1E5	349 aa	Predicted RBP	27.69	■■■□□ 2.02
NIPA2-208	ENST00000560205	BBOX1	O75936	387 aa		27.68	■■■□□ 2.02
NIPA2-208	ENST00000560205	HSP90B1	P14625	803 aa	Known RBP	27.68	■■■□□ 2.02
NIPA2-208	ENST00000560205	KSR2	Q6VAB6	950 aa		27.68	■■■□□ 2.02
NIPA2-208	ENST00000560205	MYD88	Q99836	296 aa		27.68	■■■□□ 2.02
NIPA2-208	ENST00000560205	RRAGC	Q9HB90	399 aa		27.68	■■■□□ 2.02
NIPA2-208	ENST00000560205	VAMP4	O75379	141 aa		27.67	■■■□□ 2.02
NIPA2-208	ENST00000560205	SLC4A2	P04920	1241 aa		27.67	■■■□□ 2.02
NIPA2-208	ENST00000560205	DDX46	Q7L014	1031 aa	Known RBP	27.67	■■■□□ 2.02
NIPA2-208	ENST00000560205	C16orf71	Q8IYS4	520 aa	Predicted RBP	27.67	■■■□□ 2.02
NIPA2-208	ENST00000560205	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	27.67	■■■□□ 2.02
NIPA2-208	ENST00000560205	SNED1	Q8TER0	1413 aa		27.67	■■■□□ 2.02
NIPA2-208	ENST00000560205	CCER2	I3L3R5	266 aa		27.66	■■■□□ 2.02
NIPA2-208	ENST00000560205	EXOSC9	Q06265	439 aa	Known RBP	27.66	■■■□□ 2.02
NIPA2-208	ENST00000560205	MAP3K2	Q9Y2U5	619 aa		27.66	■■■□□ 2.02
NIPA2-208	ENST00000560205	DDX60	Q8IY21	1712 aa	Known RBP	27.66	■■■□□ 2.02
NIPA2-208	ENST00000560205	ABCC4	O15439	1325 aa		27.66	■■■□□ 2.02
NIPA2-208	ENST00000560205	PI4KAP2	A4QPH2	592 aa		27.65	■■■□□ 2.02
NIPA2-208	ENST00000560205	SF3B3	Q15393	1217 aa	Known RBP	27.65	■■■□□ 2.02
NIPA2-208	ENST00000560205	PI4KAP1	Q8N8J0	262 aa		27.65	■■■□□ 2.02
NIPA2-208	ENST00000560205	SPINK5	Q9NQ38	1064 aa	Predicted RBP	27.65	■■■□□ 2.02
NIPA2-208	ENST00000560205	ZNF277	Q9NRM2	450 aa	Predicted RBP	27.65	■■■□□ 2.02
NIPA2-208	ENST00000560205	ATP6V0A2	Q9Y487	856 aa		27.65	■■■□□ 2.02
NIPA2-208	ENST00000560205	TCERG1	O14776	1098 aa	Known RBP	27.64	■■■□□ 2.02
NIPA2-208	ENST00000560205	VEGFA	P15692	232 aa	Predicted RBP	27.64	■■■□□ 2.02
NIPA2-208	ENST00000560205	IARS	P41252	1262 aa	Known RBP	27.64	■■■□□ 2.02
NIPA2-208	ENST00000560205	CWC25	Q9NXE8	425 aa	Predicted RBP	27.64	■■■□□ 2.02
NIPA2-208	ENST00000560205	ZNF521	Q96K83	1311 aa		27.64	■■■□□ 2.01
NIPA2-208	ENST00000560205	IRS4	O14654	1257 aa	Predicted RBP	27.63	■■■□□ 2.01
NIPA2-208	ENST00000560205	NEXN	Q0ZGT2	675 aa		27.63	■■■□□ 2.01
NIPA2-208	ENST00000560205	GRAP	Q13588	217 aa		27.63	■■■□□ 2.01
NIPA2-208	ENST00000560205	TMC4	Q7Z404	712 aa		27.63	■■■□□ 2.01
NIPA2-208	ENST00000560205	RBM46	Q8TBY0	533 aa	Known RBP	27.63	■■■□□ 2.01
NIPA2-208	ENST00000560205	GRAPL	Q8TC17	118 aa	Predicted RBP	27.63	■■■□□ 2.01
NIPA2-208	ENST00000560205	ZNF428	Q96B54	188 aa		27.63	■■■□□ 2.01
NIPA2-208	ENST00000560205	PCCA	P05165	728 aa	Predicted RBP	27.62	■■■□□ 2.01
NIPA2-208	ENST00000560205	SP8	Q8IXZ3	490 aa		27.62	■■■□□ 2.01
NIPA2-208	ENST00000560205	RTL5	Q5HYW3	569 aa	Predicted RBP	27.61	■■■□□ 2.01
NIPA2-208	ENST00000560205	WDR90	Q96KV7	1748 aa		27.61	■■■□□ 2.01
NIPA2-208	ENST00000560205	FLII	Q13045	1269 aa		27.6	■■■□□ 2.01
NIPA2-208	ENST00000560205	G2E3	Q7L622	706 aa		27.6	■■■□□ 2.01

Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms