RNA–Protein interactions for RNA: ENST00000560148.5

CCDC33-208, Transcript of coiled-coil domain containing 33, humanhuman

TSL 3

Gene CCDC33, Length 1,346 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-208ENST00000560148 CEP350Q5VT06 3117 aa19.71■□□□□ 0.75
CCDC33-208ENST00000560148 CCDC93Q567U6 631 aa19.71■□□□□ 0.75
CCDC33-208ENST00000560148 HSP90AB3PQ58FF7 597 aa19.71■□□□□ 0.75
CCDC33-208ENST00000560148 UTP14AQ9BVJ6 771 aaKnown RBP19.71■□□□□ 0.75
CCDC33-208ENST00000560148 ALDH1B1P30837 517 aa19.7■□□□□ 0.74
CCDC33-208ENST00000560148 TCIRG1Q13488 830 aa19.7■□□□□ 0.74
CCDC33-208ENST00000560148 CCDC27Q2M243 656 aa19.7■□□□□ 0.74
CCDC33-208ENST00000560148 NLRP10Q86W26 655 aa19.7■□□□□ 0.74
CCDC33-208ENST00000560148 SNED1Q8TER0 1413 aa19.69■□□□□ 0.74
CCDC33-208ENST00000560148 ELL2O00472 640 aaPredicted RBP19.69■□□□□ 0.74
CCDC33-208ENST00000560148 TOMM70O94826 608 aa19.69■□□□□ 0.74
CCDC33-208ENST00000560148 HOXA10P31260 410 aaPredicted RBP19.69■□□□□ 0.74
CCDC33-208ENST00000560148 WWC1Q8IX03 1113 aa19.69■□□□□ 0.74
CCDC33-208ENST00000560148 C8orf58Q8NAV2 365 aa19.69■□□□□ 0.74
CCDC33-208ENST00000560148 PLBD2Q8NHP8 589 aa19.69■□□□□ 0.74
CCDC33-208ENST00000560148 DICER1Q9UPY3 1922 aaKnown RBP19.68■□□□□ 0.74
CCDC33-208ENST00000560148 GLTPD2A6NH11 291 aa19.68■□□□□ 0.74
CCDC33-208ENST00000560148 RPGRQ92834 1020 aaKnown RBP19.68■□□□□ 0.74
CCDC33-208ENST00000560148 RRAGCQ9HB90 399 aa19.68■□□□□ 0.74
CCDC33-208ENST00000560148 HYPKQ9NX55 129 aa19.68■□□□□ 0.74
CCDC33-208ENST00000560148 RNF123Q5XPI4 1314 aa19.68■□□□□ 0.74
CCDC33-208ENST00000560148 SLC10A5Q5PT55 438 aa19.67■□□□□ 0.74
CCDC33-208ENST00000560148 ANKRD13DQ6ZTN6 518 aa19.67■□□□□ 0.74
CCDC33-208ENST00000560148 TSR2Q969E8 191 aaKnown RBP19.67■□□□□ 0.74
CCDC33-208ENST00000560148 FKBP4Q02790 459 aaKnown RBP eCLIP19.66■□□□□ 0.74
CCDC33-208ENST00000560148 SLC51AQ86UW1 340 aa19.66■□□□□ 0.74
CCDC33-208ENST00000560148 SYNE4Q8N205 404 aa19.66■□□□□ 0.74
CCDC33-208ENST00000560148 TSPYL6Q8N831 410 aa19.66■□□□□ 0.74
CCDC33-208ENST00000560148 HSPA6P17066 643 aa19.65■□□□□ 0.74
CCDC33-208ENST00000560148 RTKN2Q8IZC4 609 aa19.65■□□□□ 0.74
CCDC33-208ENST00000560148 ZNF428Q96B54 188 aa19.65■□□□□ 0.74
CCDC33-208ENST00000560148 NLRP3Q96P20 1036 aa19.65■□□□□ 0.74
CCDC33-208ENST00000560148 LAMB2P55268 1798 aa19.64■□□□□ 0.74
CCDC33-208ENST00000560148 NCBP3Q53F19 620 aaKnown RBP19.64■□□□□ 0.73
CCDC33-208ENST00000560148 RBM17Q96I25 401 aaKnown RBP19.64■□□□□ 0.73
CCDC33-208ENST00000560148 CRAMP1Q96RY5 1269 aa19.64■□□□□ 0.73
CCDC33-208ENST00000560148 ISCA1Q9BUE6 129 aa19.64■□□□□ 0.73
CCDC33-208ENST00000560148 PHAXQ9H814 394 aaKnown RBP19.64■□□□□ 0.73
CCDC33-208ENST00000560148 ZNF277Q9NRM2 450 aaPredicted RBP19.64■□□□□ 0.73
CCDC33-208ENST00000560148 TRMT112Q9UI30 125 aaKnown RBP19.64■□□□□ 0.73
CCDC33-208ENST00000560148 SH3TC1Q8TE82 1336 aa19.64■□□□□ 0.73
CCDC33-208ENST00000560148 HCLS1P14317 486 aaPredicted RBP19.63■□□□□ 0.73
CCDC33-208ENST00000560148 C16orf71Q8IYS4 520 aaPredicted RBP19.63■□□□□ 0.73
CCDC33-208ENST00000560148 RBM46Q8TBY0 533 aaKnown RBP19.63■□□□□ 0.73
CCDC33-208ENST00000560148 WDR90Q96KV7 1748 aa19.63■□□□□ 0.73
CCDC33-208ENST00000560148 IL16Q14005 1332 aa19.62■□□□□ 0.73
CCDC33-208ENST00000560148 ATP5J2-PTCD1G3V325 749 aa19.62■□□□□ 0.73
CCDC33-208ENST00000560148 PPEF1O14829 653 aaPredicted RBP19.62■□□□□ 0.73
CCDC33-208ENST00000560148 ABCC4O15439 1325 aa19.61■□□□□ 0.73
CCDC33-208ENST00000560148 GOLGA2Q08379 1002 aa19.61■□□□□ 0.73
CCDC33-208ENST00000560148 DPY19L2Q6NUT2 758 aa19.61■□□□□ 0.73
CCDC33-208ENST00000560148 DDX60Q8IY21 1712 aaKnown RBP19.61■□□□□ 0.73
CCDC33-208ENST00000560148 POTECB2RU33 542 aa19.6■□□□□ 0.73
CCDC33-208ENST00000560148 VEGFAP15692 232 aaPredicted RBP19.6■□□□□ 0.73
CCDC33-208ENST00000560148 CCDC30Q5VVM6 783 aa19.6■□□□□ 0.73
CCDC33-208ENST00000560148 CC2D2BQ6DHV5 1058 aa19.6■□□□□ 0.73
CCDC33-208ENST00000560148 RIC3Q7Z5B4 369 aa19.6■□□□□ 0.73
CCDC33-208ENST00000560148 PSMD1Q99460 953 aa19.6■□□□□ 0.73
CCDC33-208ENST00000560148 SALL2Q9Y467 1007 aaPredicted RBP19.6■□□□□ 0.73
CCDC33-208ENST00000560148 FANCIQ9NVI1 1328 aa19.59■□□□□ 0.73
CCDC33-208ENST00000560148 TCERG1O14776 1098 aaKnown RBP19.59■□□□□ 0.73
CCDC33-208ENST00000560148 IARSP41252 1262 aaKnown RBP19.59■□□□□ 0.73
CCDC33-208ENST00000560148 FAM89AQ96GI7 184 aa19.59■□□□□ 0.73
CCDC33-208ENST00000560148 COL4A5P29400 1685 aa19.59■□□□□ 0.73
CCDC33-208ENST00000560148 ZNF541Q9H0D2 1346 aa19.58■□□□□ 0.73
CCDC33-208ENST00000560148 DDNO94850 711 aaPredicted RBP19.58■□□□□ 0.73
CCDC33-208ENST00000560148 TRIM28Q13263 835 aaKnown RBP19.58■□□□□ 0.73
CCDC33-208ENST00000560148 FAM9BQ8IZU0 186 aa19.58■□□□□ 0.73
CCDC33-208ENST00000560148 FSTL1Q12841 308 aa19.57■□□□□ 0.72
CCDC33-208ENST00000560148 TWISTNBQ3B726 338 aaPredicted RBP19.57■□□□□ 0.72
CCDC33-208ENST00000560148 CHMP4AQ9BY43 222 aa19.57■□□□□ 0.72
CCDC33-208ENST00000560148 ATP6V0A2Q9Y487 856 aa19.57■□□□□ 0.72
CCDC33-208ENST00000560148 GRIPAP1Q4V328 841 aa19.56■□□□□ 0.72
CCDC33-208ENST00000560148 WDR63Q8IWG1 891 aa19.56■□□□□ 0.72
CCDC33-208ENST00000560148 MYD88Q99836 296 aa19.56■□□□□ 0.72
CCDC33-208ENST00000560148 RTL5Q5HYW3 569 aaPredicted RBP19.55■□□□□ 0.72
CCDC33-208ENST00000560148 SMC1BQ8NDV3 1235 aa19.55■□□□□ 0.72
CCDC33-208ENST00000560148 FZD9O00144 591 aa19.54■□□□□ 0.72
CCDC33-208ENST00000560148 DDX58O95786 925 aaKnown RBP19.54■□□□□ 0.72
CCDC33-208ENST00000560148 APLP1P51693 650 aa19.54■□□□□ 0.72
CCDC33-208ENST00000560148 GRAPQ13588 217 aa19.54■□□□□ 0.72
CCDC33-208ENST00000560148 DDX46Q7L014 1031 aaKnown RBP19.54■□□□□ 0.72
CCDC33-208ENST00000560148 GRAPLQ8TC17 118 aaPredicted RBP19.54■□□□□ 0.72
CCDC33-208ENST00000560148 L3MBTL3Q96JM7 780 aaPredicted RBP19.54■□□□□ 0.72
CCDC33-208ENST00000560148 STK31Q9BXU1 1019 aa19.54■□□□□ 0.72
CCDC33-208ENST00000560148 COL4A1P02462 1669 aa19.54■□□□□ 0.72
CCDC33-208ENST00000560148 BBOX1O75936 387 aa19.53■□□□□ 0.72
CCDC33-208ENST00000560148 SF3B3Q15393 1217 aaKnown RBP19.53■□□□□ 0.72
CCDC33-208ENST00000560148 ZBTB38Q8NAP3 1195 aaPredicted RBP19.53■□□□□ 0.72
CCDC33-208ENST00000560148 METTL22Q9BUU2 404 aaPredicted RBP19.53■□□□□ 0.72
CCDC33-208ENST00000560148 SPINK5Q9NQ38 1064 aaPredicted RBP19.53■□□□□ 0.72
CCDC33-208ENST00000560148 MAP3K2Q9Y2U5 619 aa19.53■□□□□ 0.72
CCDC33-208ENST00000560148 TAF1P21675 1872 aa19.53■□□□□ 0.72
CCDC33-208ENST00000560148 IRS4O14654 1257 aaPredicted RBP19.52■□□□□ 0.72
CCDC33-208ENST00000560148 CCDC191Q8NCU4 936 aa19.52■□□□□ 0.72
CCDC33-208ENST00000560148 LRRC37AA6NMS7 1700 aa19.52■□□□□ 0.72
CCDC33-208ENST00000560148 PI4KAP2A4QPH2 592 aa19.51■□□□□ 0.71
CCDC33-208ENST00000560148 KSR2Q6VAB6 950 aa19.51■□□□□ 0.71
CCDC33-208ENST00000560148 G2E3Q7L622 706 aa19.51■□□□□ 0.71
CCDC33-208ENST00000560148 SP8Q8IXZ3 490 aa19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms