RNA–Protein interactions for RNA: ENST00000559738.1

CTDSPL2-207, Transcript of CTD small phosphatase like 2, humanhuman

TSL 4

Gene CTDSPL2, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-207ENST00000559738 CHSY3Q70JA7 882 aa8.35□□□□□ -1.07
CTDSPL2-207ENST00000559738 QTRT2Q9H974 415 aaKnown RBP8.35□□□□□ -1.07
CTDSPL2-207ENST00000559738 BCS1LQ9Y276 419 aa8.35□□□□□ -1.07
CTDSPL2-207ENST00000559738 CEP63Q96MT8 703 aa8.34□□□□□ -1.07
CTDSPL2-207ENST00000559738 BRD7Q9NPI1 651 aa8.34□□□□□ -1.07
CTDSPL2-207ENST00000559738 ANKIB1Q9P2G1 1089 aa8.34□□□□□ -1.07
CTDSPL2-207ENST00000559738 DGKGP49619 791 aa8.33□□□□□ -1.08
CTDSPL2-207ENST00000559738 TYRO3Q06418 890 aa8.33□□□□□ -1.08
CTDSPL2-207ENST00000559738 PLA2G4EQ3MJ16 856 aa8.33□□□□□ -1.08
CTDSPL2-207ENST00000559738 LINC00114Q6XXX2 140 aa8.33□□□□□ -1.08
CTDSPL2-207ENST00000559738 SYT9Q86SS6 491 aa8.33□□□□□ -1.08
CTDSPL2-207ENST00000559738 CLP1Q92989 425 aaKnown RBP8.33□□□□□ -1.08
CTDSPL2-207ENST00000559738 SLC30A3Q99726 388 aa8.33□□□□□ -1.08
CTDSPL2-207ENST00000559738 KLK14Q9P0G3 267 aa8.33□□□□□ -1.08
CTDSPL2-207ENST00000559738 CAPN12Q6ZSI9 719 aa8.32□□□□□ -1.08
CTDSPL2-207ENST00000559738 RAB44Q7Z6P3 723 aaPredicted RBP8.32□□□□□ -1.08
CTDSPL2-207ENST00000559738 CXXC1Q9P0U4 656 aaPredicted RBP8.32□□□□□ -1.08
CTDSPL2-207ENST00000559738 GNB5O14775 395 aa8.31□□□□□ -1.08
CTDSPL2-207ENST00000559738 PPP1R15AO75807 674 aaPredicted RBP8.31□□□□□ -1.08
CTDSPL2-207ENST00000559738 IGHA1P01876 353 aa8.31□□□□□ -1.08
CTDSPL2-207ENST00000559738 COL8A1P27658 744 aa8.31□□□□□ -1.08
CTDSPL2-207ENST00000559738 SPEM2Q0P670 501 aa8.31□□□□□ -1.08
CTDSPL2-207ENST00000559738 BTLAQ7Z6A9 289 aa8.31□□□□□ -1.08
CTDSPL2-207ENST00000559738 VTI1AQ96AJ9 217 aa8.31□□□□□ -1.08
CTDSPL2-207ENST00000559738 SUV39H2Q9H5I1 410 aa8.31□□□□□ -1.08
CTDSPL2-207ENST00000559738 DMGDHQ9UI17 866 aaKnown RBP8.31□□□□□ -1.08
CTDSPL2-207ENST00000559738 LRFN2Q9ULH4 789 aa8.31□□□□□ -1.08
CTDSPL2-207ENST00000559738 ITGB2P05107 769 aa8.3□□□□□ -1.08
CTDSPL2-207ENST00000559738 DGKZQ13574 1117 aa8.3□□□□□ -1.08
CTDSPL2-207ENST00000559738 MYO19Q96H55 970 aa8.3□□□□□ -1.08
CTDSPL2-207ENST00000559738 ELOA3CA0A087WX78 387 aaPredicted RBP8.29□□□□□ -1.08
CTDSPL2-207ENST00000559738 TMEM88BA6NKF7 163 aa8.29□□□□□ -1.08
CTDSPL2-207ENST00000559738 ELOA3DA6NLF2 546 aaPredicted RBP8.29□□□□□ -1.08
CTDSPL2-207ENST00000559738 TGFBR3LH3BV60 316 aa8.29□□□□□ -1.08
CTDSPL2-207ENST00000559738 PIK3R2O00459 728 aa8.29□□□□□ -1.08
CTDSPL2-207ENST00000559738 SIN3BO75182 1162 aa8.29□□□□□ -1.08
CTDSPL2-207ENST00000559738 KCNQ4P56696 695 aa8.29□□□□□ -1.08
CTDSPL2-207ENST00000559738 HIF1AQ16665 826 aa8.29□□□□□ -1.08
CTDSPL2-207ENST00000559738 ELOA3BQ3SY89 546 aa8.29□□□□□ -1.08
CTDSPL2-207ENST00000559738 COX20Q5RI15 118 aa8.29□□□□□ -1.08
CTDSPL2-207ENST00000559738 IER5Q5VY09 327 aa8.29□□□□□ -1.08
CTDSPL2-207ENST00000559738 ELOA3Q8NG57 546 aa8.29□□□□□ -1.08
CTDSPL2-207ENST00000559738 MKNK1Q9BUB5 465 aa8.29□□□□□ -1.08
CTDSPL2-207ENST00000559738 SAP130Q9H0E3 1048 aa8.29□□□□□ -1.08
CTDSPL2-207ENST00000559738 KCNH4Q9UQ05 1017 aa8.29□□□□□ -1.08
CTDSPL2-207ENST00000559738 KRBA1A5PL33 1030 aa8.28□□□□□ -1.08
CTDSPL2-207ENST00000559738 NEUROD1Q13562 356 aa8.28□□□□□ -1.08
CTDSPL2-207ENST00000559738 ARID3AQ99856 593 aa8.28□□□□□ -1.08
CTDSPL2-207ENST00000559738 CARNS1A5YM72 827 aa8.27□□□□□ -1.09
CTDSPL2-207ENST00000559738 MSTNO14793 375 aa8.27□□□□□ -1.09
CTDSPL2-207ENST00000559738 ALAS2P22557 587 aa8.27□□□□□ -1.09
CTDSPL2-207ENST00000559738 ATP2B4P23634 1241 aa8.27□□□□□ -1.09
CTDSPL2-207ENST00000559738 GRNP28799 593 aaKnown RBP8.27□□□□□ -1.09
CTDSPL2-207ENST00000559738 C11orf91Q3C1V1 193 aa8.27□□□□□ -1.09
CTDSPL2-207ENST00000559738 ALYREFQ86V81 257 aaKnown RBP8.27□□□□□ -1.09
CTDSPL2-207ENST00000559738 MDFIQ99750 246 aa8.27□□□□□ -1.09
CTDSPL2-207ENST00000559738 SPOCK3Q9BQ16 436 aa8.27□□□□□ -1.09
CTDSPL2-207ENST00000559738 TNFRSF25Q93038 417 aa8.26□□□□□ -1.09
CTDSPL2-207ENST00000559738 COL26A1Q96A83 441 aa8.26□□□□□ -1.09
CTDSPL2-207ENST00000559738 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.26□□□□□ -1.09
CTDSPL2-207ENST00000559738 NOP53Q9NZM5 478 aaKnown RBP8.26□□□□□ -1.09
CTDSPL2-207ENST00000559738 ADARB2-AS1A8MUL3 147 aa8.25□□□□□ -1.09
CTDSPL2-207ENST00000559738 INPP5BP32019 993 aa8.25□□□□□ -1.09
CTDSPL2-207ENST00000559738 SCNN1AP37088 669 aa8.25□□□□□ -1.09
CTDSPL2-207ENST00000559738 NAA30Q147X3 362 aaPredicted RBP8.25□□□□□ -1.09
CTDSPL2-207ENST00000559738 FAM26DQ5JW98 314 aa8.25□□□□□ -1.09
CTDSPL2-207ENST00000559738 BHMTQ93088 406 aa8.25□□□□□ -1.09
CTDSPL2-207ENST00000559738 IFT43Q96FT9 208 aa8.25□□□□□ -1.09
CTDSPL2-207ENST00000559738 MICAL2O94851 1124 aa8.24□□□□□ -1.09
CTDSPL2-207ENST00000559738 PROCP04070 461 aa8.24□□□□□ -1.09
CTDSPL2-207ENST00000559738 ADH7P40394 386 aa8.24□□□□□ -1.09
CTDSPL2-207ENST00000559738 IDH3AP50213 366 aa8.24□□□□□ -1.09
CTDSPL2-207ENST00000559738 C16orf46Q6P387 395 aa8.24□□□□□ -1.09
CTDSPL2-207ENST00000559738 TRIM11Q96F44 468 aa8.24□□□□□ -1.09
CTDSPL2-207ENST00000559738 TNFRSF10BO14763 440 aa8.23□□□□□ -1.09
CTDSPL2-207ENST00000559738 OPLAHO14841 1288 aa8.23□□□□□ -1.09
CTDSPL2-207ENST00000559738 PTCD1O75127 700 aaKnown RBP8.23□□□□□ -1.09
CTDSPL2-207ENST00000559738 TBC1D8BQ0IIM8 1120 aa8.23□□□□□ -1.09
CTDSPL2-207ENST00000559738 SEPT3Q9UH03 358 aa8.23□□□□□ -1.09
CTDSPL2-207ENST00000559738 M0R082 166 aa8.22□□□□□ -1.09
CTDSPL2-207ENST00000559738 ETFBKMTQ8IXQ9 262 aa8.22□□□□□ -1.09
CTDSPL2-207ENST00000559738 ZNF417Q8TAU3 575 aa8.22□□□□□ -1.09
CTDSPL2-207ENST00000559738 ZNF587Q96SQ5 575 aaPredicted RBP8.22□□□□□ -1.09
CTDSPL2-207ENST00000559738 PLVAPQ9BX97 442 aa8.22□□□□□ -1.09
CTDSPL2-207ENST00000559738 GSX2Q9BZM3 304 aa8.22□□□□□ -1.09
CTDSPL2-207ENST00000559738 UBE2OQ9C0C9 1292 aaKnown RBP8.22□□□□□ -1.09
CTDSPL2-207ENST00000559738 STARD13Q9Y3M8 1113 aa8.22□□□□□ -1.09
CTDSPL2-207ENST00000559738 ALBP02768 609 aa8.21□□□□□ -1.1
CTDSPL2-207ENST00000559738 SSFA2P28290 1259 aa8.21□□□□□ -1.1
CTDSPL2-207ENST00000559738 TREML1Q86YW5 311 aa8.21□□□□□ -1.1
CTDSPL2-207ENST00000559738 IGFLR1Q9H665 355 aa8.21□□□□□ -1.1
CTDSPL2-207ENST00000559738 USP20Q9Y2K6 914 aa8.21□□□□□ -1.1
CTDSPL2-207ENST00000559738 EPB42P16452 691 aa8.2□□□□□ -1.1
CTDSPL2-207ENST00000559738 ARSDP51689 593 aa8.2□□□□□ -1.1
CTDSPL2-207ENST00000559738 PHLDB3Q6NSJ2 640 aa8.2□□□□□ -1.1
CTDSPL2-207ENST00000559738 C8orf86Q6ZUL3 223 aa8.2□□□□□ -1.1
CTDSPL2-207ENST00000559738 PNMA5Q96PV4 448 aa8.2□□□□□ -1.1
CTDSPL2-207ENST00000559738 NFKB1P19838 968 aa8.19□□□□□ -1.1
CTDSPL2-207ENST00000559738 CCINQ13939 588 aa8.19□□□□□ -1.1
CTDSPL2-207ENST00000559738 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms