RNA–Protein interactions for RNA: ENST00000559728.1

HMG20A-209, Transcript of high mobility group 20A, humanhuman

TSL 2

Gene HMG20A, Length 981 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-209ENST00000559728 TRIM28Q13263 835 aaKnown RBP11.56□□□□□ -0.56
HMG20A-209ENST00000559728 BEND3Q5T5X7 828 aa11.56□□□□□ -0.56
HMG20A-209ENST00000559728 RIC3Q7Z5B4 369 aa11.56□□□□□ -0.56
HMG20A-209ENST00000559728 NPM2Q86SE8 214 aaKnown RBP11.56□□□□□ -0.56
HMG20A-209ENST00000559728 NLRP10Q86W26 655 aa11.56□□□□□ -0.56
HMG20A-209ENST00000559728 NIP7Q9Y221 180 aaKnown RBP eCLIP11.56□□□□□ -0.56
HMG20A-209ENST00000559728 CARMIL3Q8ND23 1372 aa11.55□□□□□ -0.56
HMG20A-209ENST00000559728 ATP5J2-PTCD1G3V325 749 aa11.55□□□□□ -0.56
HMG20A-209ENST00000559728 NTSR2O95665 410 aa11.55□□□□□ -0.56
HMG20A-209ENST00000559728 FKBP5Q13451 457 aaPredicted RBP11.55□□□□□ -0.56
HMG20A-209ENST00000559728 PRR5LQ6MZQ0 368 aa11.55□□□□□ -0.56
HMG20A-209ENST00000559728 DNAAF4Q8WXU2 420 aa11.55□□□□□ -0.56
HMG20A-209ENST00000559728 MYD88Q99836 296 aa11.55□□□□□ -0.56
HMG20A-209ENST00000559728 ZNF652Q9Y2D9 606 aa11.55□□□□□ -0.56
HMG20A-209ENST00000559728 PTPRCP08575 1304 aa11.55□□□□□ -0.56
HMG20A-209ENST00000559728 C10orf71Q711Q0 1435 aa11.54□□□□□ -0.56
HMG20A-209ENST00000559728 LRP5O75197 1615 aa11.54□□□□□ -0.56
HMG20A-209ENST00000559728 DDX58O95786 925 aaKnown RBP11.54□□□□□ -0.56
HMG20A-209ENST00000559728 CWF19L2Q2TBE0 894 aaKnown RBP11.54□□□□□ -0.56
HMG20A-209ENST00000559728 SYNE4Q8N205 404 aa11.54□□□□□ -0.56
HMG20A-209ENST00000559728 CCDC24Q8N4L8 307 aa11.54□□□□□ -0.56
HMG20A-209ENST00000559728 SETDB2Q96T68 719 aa11.54□□□□□ -0.56
HMG20A-209ENST00000559728 NRXN2Q9P2S2 1712 aa11.54□□□□□ -0.56
HMG20A-209ENST00000559728 ABCC12Q96J65 1359 aa11.54□□□□□ -0.56
HMG20A-209ENST00000559728 IBTKQ9P2D0 1353 aaPredicted RBP11.54□□□□□ -0.56
HMG20A-209ENST00000559728 NEURL1BA8MQ27 555 aa11.53□□□□□ -0.56
HMG20A-209ENST00000559728 TRIM27P14373 513 aa11.53□□□□□ -0.56
HMG20A-209ENST00000559728 POLD1P28340 1107 aa11.53□□□□□ -0.56
HMG20A-209ENST00000559728 CASP7P55210 303 aa11.53□□□□□ -0.56
HMG20A-209ENST00000559728 HSP90AB3PQ58FF7 597 aa11.53□□□□□ -0.56
HMG20A-209ENST00000559728 ARHGAP45Q92619 1136 aa11.53□□□□□ -0.56
HMG20A-209ENST00000559728 RCAN3Q9UKA8 241 aa11.53□□□□□ -0.56
HMG20A-209ENST00000559728 FAM177BA6PVY3 158 aa11.52□□□□□ -0.57
HMG20A-209ENST00000559728 MNX1P50219 401 aaPredicted RBP11.52□□□□□ -0.57
HMG20A-209ENST00000559728 ERFEQ4G0M1 354 aa11.52□□□□□ -0.57
HMG20A-209ENST00000559728 PARP10Q53GL7 1025 aa11.52□□□□□ -0.57
HMG20A-209ENST00000559728 C3orf67Q6ZVT6 689 aa11.52□□□□□ -0.57
HMG20A-209ENST00000559728 NUTM1Q86Y26 1132 aa11.52□□□□□ -0.57
HMG20A-209ENST00000559728 LINS1Q8NG48 757 aa11.52□□□□□ -0.57
HMG20A-209ENST00000559728 FHDC1Q9C0D6 1143 aaPredicted RBP11.52□□□□□ -0.57
HMG20A-209ENST00000559728 PARP3Q9Y6F1 533 aa11.52□□□□□ -0.57
HMG20A-209ENST00000559728 ABCC4O15439 1325 aa11.52□□□□□ -0.57
HMG20A-209ENST00000559728 KIF16BQ96L93 1317 aa11.52□□□□□ -0.57
HMG20A-209ENST00000559728 KLRG2A4D1S0 409 aaPredicted RBP11.51□□□□□ -0.57
HMG20A-209ENST00000559728 RLBP1P12271 317 aa11.51□□□□□ -0.57
HMG20A-209ENST00000559728 KCNA3P22001 575 aa11.51□□□□□ -0.57
HMG20A-209ENST00000559728 GCKRQ14397 625 aa11.51□□□□□ -0.57
HMG20A-209ENST00000559728 SLC10A5Q5PT55 438 aa11.51□□□□□ -0.57
HMG20A-209ENST00000559728 NBPF5PQ86XG9 351 aaPredicted RBP11.51□□□□□ -0.57
HMG20A-209ENST00000559728 CCDC191Q8NCU4 936 aa11.51□□□□□ -0.57
HMG20A-209ENST00000559728 ARFGEF2Q9Y6D5 1785 aa11.51□□□□□ -0.57
HMG20A-209ENST00000559728 PXDNLA1KZ92 1463 aa11.51□□□□□ -0.57
HMG20A-209ENST00000559728 H7C1W4 665 aa11.5□□□□□ -0.57
HMG20A-209ENST00000559728 ATF7IPQ6VMQ6 1270 aa11.5□□□□□ -0.57
HMG20A-209ENST00000559728 TPTE2Q6XPS3 522 aa11.5□□□□□ -0.57
HMG20A-209ENST00000559728 CNBD1Q8NA66 436 aa11.5□□□□□ -0.57
HMG20A-209ENST00000559728 NLGN2Q8NFZ4 835 aa11.5□□□□□ -0.57
HMG20A-209ENST00000559728 SPOCK2Q92563 424 aa11.5□□□□□ -0.57
HMG20A-209ENST00000559728 JARID2Q92833 1246 aaPredicted RBP11.5□□□□□ -0.57
HMG20A-209ENST00000559728 FAM89AQ96GI7 184 aa11.5□□□□□ -0.57
HMG20A-209ENST00000559728 UTP14AQ9BVJ6 771 aaKnown RBP11.5□□□□□ -0.57
HMG20A-209ENST00000559728 API5Q9BZZ5 524 aaKnown RBP11.5□□□□□ -0.57
HMG20A-209ENST00000559728 CD2APQ9Y5K6 639 aa11.5□□□□□ -0.57
HMG20A-209ENST00000559728 NUP98P52948 1817 aa11.5□□□□□ -0.57
HMG20A-209ENST00000559728 PLIN1O60240 522 aa11.49□□□□□ -0.57
HMG20A-209ENST00000559728 PCCAP05165 728 aaPredicted RBP11.49□□□□□ -0.57
HMG20A-209ENST00000559728 ZKSCAN2Q63HK3 967 aa11.49□□□□□ -0.57
HMG20A-209ENST00000559728 INTS3Q68E01 1043 aaKnown RBP11.49□□□□□ -0.57
HMG20A-209ENST00000559728 POTEHQ6S545 545 aa11.49□□□□□ -0.57
HMG20A-209ENST00000559728 ZBTB38Q8NAP3 1195 aaPredicted RBP11.49□□□□□ -0.57
HMG20A-209ENST00000559728 FRAT1Q92837 279 aaPredicted RBP11.49□□□□□ -0.57
HMG20A-209ENST00000559728 SYT17Q9BSW7 474 aa11.49□□□□□ -0.57
HMG20A-209ENST00000559728 BRIP1Q9BX63 1249 aa11.49□□□□□ -0.57
HMG20A-209ENST00000559728 CWC25Q9NXE8 425 aaPredicted RBP11.49□□□□□ -0.57
HMG20A-209ENST00000559728 RNF123Q5XPI4 1314 aa11.49□□□□□ -0.57
HMG20A-209ENST00000559728 RIC1Q4ADV7 1423 aa11.49□□□□□ -0.57
HMG20A-209ENST00000559728 ALDH1L1O75891 902 aa11.48□□□□□ -0.57
HMG20A-209ENST00000559728 HCLS1P14317 486 aaPredicted RBP11.48□□□□□ -0.57
HMG20A-209ENST00000559728 CHRNA5P30532 468 aa11.48□□□□□ -0.57
HMG20A-209ENST00000559728 CRY2Q49AN0 593 aa11.48□□□□□ -0.57
HMG20A-209ENST00000559728 C20orf194Q5TEA3 1177 aa11.48□□□□□ -0.57
HMG20A-209ENST00000559728 SLC4A10Q6U841 1118 aa11.48□□□□□ -0.57
HMG20A-209ENST00000559728 PPP1R42Q7Z4L9 355 aa11.48□□□□□ -0.57
HMG20A-209ENST00000559728 CLUAP1Q96AJ1 413 aa11.48□□□□□ -0.57
HMG20A-209ENST00000559728 KAZALD1Q96I82 304 aa11.48□□□□□ -0.57
HMG20A-209ENST00000559728 SRCIN1Q9C0H9 1055 aa11.48□□□□□ -0.57
HMG20A-209ENST00000559728 NYXQ9GZU5 481 aa11.48□□□□□ -0.57
HMG20A-209ENST00000559728 USP44Q9H0E7 712 aa11.48□□□□□ -0.57
HMG20A-209ENST00000559728 TRMT112Q9UI30 125 aaKnown RBP11.48□□□□□ -0.57
HMG20A-209ENST00000559728 UTYO14607 1347 aa11.48□□□□□ -0.57
HMG20A-209ENST00000559728 SH3TC1Q8TE82 1336 aa11.48□□□□□ -0.57
HMG20A-209ENST00000559728 KIAA1551Q9HCM1 1747 aa11.48□□□□□ -0.57
HMG20A-209ENST00000559728 AFDNP55196 1824 aaKnown RBP11.47□□□□□ -0.57
HMG20A-209ENST00000559728 CDHR2Q9BYE9 1310 aa11.47□□□□□ -0.57
HMG20A-209ENST00000559728 IPO8O15397 1037 aaKnown RBP11.47□□□□□ -0.57
HMG20A-209ENST00000559728 NBPF7P0C2Y1 421 aaPredicted RBP11.47□□□□□ -0.57
HMG20A-209ENST00000559728 DPEP1P16444 411 aa11.47□□□□□ -0.57
HMG20A-209ENST00000559728 NEXNQ0ZGT2 675 aa11.47□□□□□ -0.57
HMG20A-209ENST00000559728 RTL5Q5HYW3 569 aaPredicted RBP11.47□□□□□ -0.57
HMG20A-209ENST00000559728 TMEM57Q8N5G2 664 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms