RNA–Protein interactions for RNA: ENST00000559566.5

SHF-205, Transcript of Src homology 2 domain containing F, humanhuman

TSL 1 (best)

Gene SHF, Length 884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHF-205ENST00000559566 METTL22Q9BUU2 404 aaPredicted RBP24.99■■□□□ 1.59
SHF-205ENST00000559566 BCS1LQ9Y276 419 aa24.99■■□□□ 1.59
SHF-205ENST00000559566 ZBED9Q6R2W3 1325 aa24.98■■□□□ 1.59
SHF-205ENST00000559566 KLRG2A4D1S0 409 aaPredicted RBP24.98■■□□□ 1.59
SHF-205ENST00000559566 DDX58O95786 925 aaKnown RBP24.98■■□□□ 1.59
SHF-205ENST00000559566 MRPL50Q8N5N7 158 aaKnown RBP24.98■■□□□ 1.59
SHF-205ENST00000559566 SSH1Q8WYL5 1049 aa24.98■■□□□ 1.59
SHF-205ENST00000559566 PIM2Q9P1W9 311 aa24.98■■□□□ 1.59
SHF-205ENST00000559566 H0YIN7 160 aa24.97■■□□□ 1.59
SHF-205ENST00000559566 IGKV5-2P06315 115 aa24.97■■□□□ 1.59
SHF-205ENST00000559566 SRGNP10124 158 aa24.97■■□□□ 1.59
SHF-205ENST00000559566 GTF2E1P29083 439 aaPredicted RBP24.97■■□□□ 1.59
SHF-205ENST00000559566 TRIM28Q13263 835 aaKnown RBP24.97■■□□□ 1.59
SHF-205ENST00000559566 FKBP5Q13451 457 aaPredicted RBP24.97■■□□□ 1.59
SHF-205ENST00000559566 BCL2L13Q9BXK5 485 aa24.97■■□□□ 1.59
SHF-205ENST00000559566 DLEC1Q9Y238 1755 aa24.96■■□□□ 1.59
SHF-205ENST00000559566 F6X3S4 739 aa24.95■■□□□ 1.58
SHF-205ENST00000559566 TRMT112Q9UI30 125 aaKnown RBP24.95■■□□□ 1.58
SHF-205ENST00000559566 UTRNP46939 3433 aa24.95■■□□□ 1.58
SHF-205ENST00000559566 RIC1Q4ADV7 1423 aa24.95■■□□□ 1.58
SHF-205ENST00000559566 DCAF8L1A6NGE4 600 aa24.94■■□□□ 1.58
SHF-205ENST00000559566 DALRD3Q5D0E6 543 aaKnown RBP24.94■■□□□ 1.58
SHF-205ENST00000559566 ZNF622Q969S3 477 aaKnown RBP eCLIP24.94■■□□□ 1.58
SHF-205ENST00000559566 HCLS1P14317 486 aaPredicted RBP24.93■■□□□ 1.58
SHF-205ENST00000559566 CWF19L2Q2TBE0 894 aaKnown RBP24.93■■□□□ 1.58
SHF-205ENST00000559566 RTL5Q5HYW3 569 aaPredicted RBP24.93■■□□□ 1.58
SHF-205ENST00000559566 SLC10A5Q5PT55 438 aa24.93■■□□□ 1.58
SHF-205ENST00000559566 JARID2Q92833 1246 aaPredicted RBP24.93■■□□□ 1.58
SHF-205ENST00000559566 FAM89AQ96GI7 184 aa24.93■■□□□ 1.58
SHF-205ENST00000559566 SH3TC1Q8TE82 1336 aa24.92■■□□□ 1.58
SHF-205ENST00000559566 CRY2Q49AN0 593 aa24.92■■□□□ 1.58
SHF-205ENST00000559566 DNAAF4Q8WXU2 420 aa24.92■■□□□ 1.58
SHF-205ENST00000559566 RNF123Q5XPI4 1314 aa24.91■■□□□ 1.58
SHF-205ENST00000559566 STYK1Q6J9G0 422 aa24.91■■□□□ 1.58
SHF-205ENST00000559566 TTLL6Q8N841 843 aa24.91■■□□□ 1.58
SHF-205ENST00000559566 MASTLQ96GX5 879 aa24.91■■□□□ 1.58
SHF-205ENST00000559566 PDZRN3Q9UPQ7 1066 aa24.91■■□□□ 1.58
SHF-205ENST00000559566 NEURL1BA8MQ27 555 aa24.9■■□□□ 1.58
SHF-205ENST00000559566 GRIN3BO60391 1043 aa24.9■■□□□ 1.58
SHF-205ENST00000559566 CCDC191Q8NCU4 936 aa24.9■■□□□ 1.58
SHF-205ENST00000559566 CT47B1P0C2W7 299 aaPredicted RBP24.89■■□□□ 1.58
SHF-205ENST00000559566 NPR1P16066 1061 aa24.89■■□□□ 1.58
SHF-205ENST00000559566 ALDH1L2Q3SY69 923 aa24.89■■□□□ 1.58
SHF-205ENST00000559566 SLC51AQ86UW1 340 aa24.89■■□□□ 1.58
SHF-205ENST00000559566 CWC25Q9NXE8 425 aaPredicted RBP24.89■■□□□ 1.58
SHF-205ENST00000559566 RARSP54136 660 aaKnown RBP24.88■■□□□ 1.57
SHF-205ENST00000559566 SMC4Q9NTJ3 1288 aa24.88■■□□□ 1.57
SHF-205ENST00000559566 BEND3Q5T5X7 828 aa24.87■■□□□ 1.57
SHF-205ENST00000559566 PRPF40BQ6NWY9 871 aaKnown RBP24.87■■□□□ 1.57
SHF-205ENST00000559566 ZBTB38Q8NAP3 1195 aaPredicted RBP24.87■■□□□ 1.57
SHF-205ENST00000559566 ZNF219Q9P2Y4 722 aaPredicted RBP24.87■■□□□ 1.57
SHF-205ENST00000559566 DDX60Q8IY21 1712 aaKnown RBP24.86■■□□□ 1.57
SHF-205ENST00000559566 IRS4O14654 1257 aaPredicted RBP24.86■■□□□ 1.57
SHF-205ENST00000559566 PCCAP05165 728 aaPredicted RBP24.86■■□□□ 1.57
SHF-205ENST00000559566 NEXNQ0ZGT2 675 aa24.86■■□□□ 1.57
SHF-205ENST00000559566 NLRP3Q96P20 1036 aa24.86■■□□□ 1.57
SHF-205ENST00000559566 CACNA1FO60840 1977 aa24.85■■□□□ 1.57
SHF-205ENST00000559566 ARFGEF1Q9Y6D6 1849 aa24.85■■□□□ 1.57
SHF-205ENST00000559566 LINS1Q8NG48 757 aa24.85■■□□□ 1.57
SHF-205ENST00000559566 CNKSR1Q969H4 720 aa24.85■■□□□ 1.57
SHF-205ENST00000559566 SLX4Q8IY92 1834 aa24.84■■□□□ 1.57
SHF-205ENST00000559566 C21orf2O43822 256 aa24.84■■□□□ 1.57
SHF-205ENST00000559566 HOXA10P31260 410 aaPredicted RBP24.84■■□□□ 1.57
SHF-205ENST00000559566 GCKRQ14397 625 aa24.84■■□□□ 1.57
SHF-205ENST00000559566 OLFM4Q6UX06 510 aa24.84■■□□□ 1.57
SHF-205ENST00000559566 ARHGAP27Q6ZUM4 889 aa24.84■■□□□ 1.57
SHF-205ENST00000559566 C7orf43Q8WVR3 580 aa24.84■■□□□ 1.57
SHF-205ENST00000559566 LAMB2P55268 1798 aa24.83■■□□□ 1.57
SHF-205ENST00000559566 COL4A1P02462 1669 aa24.82■■□□□ 1.56
SHF-205ENST00000559566 CASP7P55210 303 aa24.82■■□□□ 1.56
SHF-205ENST00000559566 SLC4A10Q6U841 1118 aa24.82■■□□□ 1.56
SHF-205ENST00000559566 RPGRQ92834 1020 aaKnown RBP24.82■■□□□ 1.56
SHF-205ENST00000559566 PTPRCP08575 1304 aa24.82■■□□□ 1.56
SHF-205ENST00000559566 H7C1W4 665 aa24.81■■□□□ 1.56
SHF-205ENST00000559566 BCAR3O75815 825 aa24.81■■□□□ 1.56
SHF-205ENST00000559566 PRELPP51888 382 aa24.81■■□□□ 1.56
SHF-205ENST00000559566 BRPF1P55201 1214 aaPredicted RBP24.81■■□□□ 1.56
SHF-205ENST00000559566 RASSF7Q02833 373 aa24.81■■□□□ 1.56
SHF-205ENST00000559566 NOB1Q9ULX3 412 aaKnown RBP24.81■■□□□ 1.56
SHF-205ENST00000559566 ABCC4O15439 1325 aa24.81■■□□□ 1.56
SHF-205ENST00000559566 NFKBIEO00221 500 aa24.8■■□□□ 1.56
SHF-205ENST00000559566 CRAMP1Q96RY5 1269 aa24.8■■□□□ 1.56
SHF-205ENST00000559566 CDHR2Q9BYE9 1310 aa24.8■■□□□ 1.56
SHF-205ENST00000559566 CACNA1SQ13698 1873 aa24.79■■□□□ 1.56
SHF-205ENST00000559566 SF3B3Q15393 1217 aaKnown RBP24.79■■□□□ 1.56
SHF-205ENST00000559566 UBE3BQ7Z3V4 1068 aa24.79■■□□□ 1.56
SHF-205ENST00000559566 RBM17Q96I25 401 aaKnown RBP24.79■■□□□ 1.56
SHF-205ENST00000559566 ALDH1B1P30837 517 aa24.78■■□□□ 1.56
SHF-205ENST00000559566 TNNQ9UQP3 1299 aa24.77■■□□□ 1.56
SHF-205ENST00000559566 SNED1Q8TER0 1413 aa24.77■■□□□ 1.56
SHF-205ENST00000559566 PDE8AO60658 829 aa24.76■■□□□ 1.55
SHF-205ENST00000559566 YY1P25490 414 aa24.76■■□□□ 1.55
SHF-205ENST00000559566 CCDC85AQ96PX6 553 aaPredicted RBP24.76■■□□□ 1.55
SHF-205ENST00000559566 CELF1Q92879 486 aaKnown RBP24.75■■□□□ 1.55
SHF-205ENST00000559566 SRCIN1Q9C0H9 1055 aa24.75■■□□□ 1.55
SHF-205ENST00000559566 SEC31BQ9NQW1 1179 aa24.75■■□□□ 1.55
SHF-205ENST00000559566 PPEF1O14829 653 aaPredicted RBP24.74■■□□□ 1.55
SHF-205ENST00000559566 ALDH1L1O75891 902 aa24.74■■□□□ 1.55
SHF-205ENST00000559566 CTSWP56202 376 aa24.74■■□□□ 1.55
SHF-205ENST00000559566 GRAPQ13588 217 aa24.73■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms