RNA–Protein interactions for RNA: ENST00000559361.5

PSEN1-224, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 795 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-224ENST00000559361 HSPA8P11142 646 aaKnown RBP21.92■■□□□ 1.1
PSEN1-224ENST00000559361 IARSP41252 1262 aaKnown RBP21.92■■□□□ 1.1
PSEN1-224ENST00000559361 MAP1SQ66K74 1059 aaPredicted RBP21.92■■□□□ 1.1
PSEN1-224ENST00000559361 NBPF10Q6P3W6 841 aaKnown RBP21.92■■□□□ 1.1
PSEN1-224ENST00000559361 GPC2Q8N158 579 aa21.92■■□□□ 1.1
PSEN1-224ENST00000559361 SYNE4Q8N205 404 aa21.92■■□□□ 1.1
PSEN1-224ENST00000559361 NBPF15Q8N660 670 aa21.92■■□□□ 1.1
PSEN1-224ENST00000559361 ALDH1B1P30837 517 aa21.91■■□□□ 1.1
PSEN1-224ENST00000559361 RTF1Q92541 710 aaKnown RBP21.91■■□□□ 1.1
PSEN1-224ENST00000559361 NIP7Q9Y221 180 aaKnown RBP eCLIP21.91■■□□□ 1.1
PSEN1-224ENST00000559361 WDR33Q9C0J8 1336 aaKnown RBP21.9■■□□□ 1.1
PSEN1-224ENST00000559361 RIPK4P57078 832 aa21.9■■□□□ 1.1
PSEN1-224ENST00000559361 CCDC27Q2M243 656 aa21.9■■□□□ 1.1
PSEN1-224ENST00000559361 PSMD1Q99460 953 aa21.9■■□□□ 1.1
PSEN1-224ENST00000559361 MAP2K1Q02750 393 aaPredicted RBP21.89■■□□□ 1.09
PSEN1-224ENST00000559361 CRY2Q49AN0 593 aa21.88■■□□□ 1.09
PSEN1-224ENST00000559361 ABHD8Q96I13 439 aa21.88■■□□□ 1.09
PSEN1-224ENST00000559361 HLFQ16534 295 aa21.87■■□□□ 1.09
PSEN1-224ENST00000559361 DDX21Q9NR30 783 aaKnown RBP eCLIP21.87■■□□□ 1.09
PSEN1-224ENST00000559361 LTBP1Q14766 1721 aa21.86■■□□□ 1.09
PSEN1-224ENST00000559361 SLC34A2O95436 690 aa21.86■■□□□ 1.09
PSEN1-224ENST00000559361 CALD1Q05682 793 aaKnown RBP21.86■■□□□ 1.09
PSEN1-224ENST00000559361 COL4A5P29400 1685 aa21.85■■□□□ 1.09
PSEN1-224ENST00000559361 THSD7BQ9C0I4 1608 aa21.85■■□□□ 1.09
PSEN1-224ENST00000559361 CC2D2BQ6DHV5 1058 aa21.85■■□□□ 1.09
PSEN1-224ENST00000559361 JDP2Q8WYK2 163 aa21.85■■□□□ 1.09
PSEN1-224ENST00000559361 TRPM7Q96QT4 1865 aa21.84■■□□□ 1.09
PSEN1-224ENST00000559361 FAM177BA6PVY3 158 aa21.84■■□□□ 1.09
PSEN1-224ENST00000559361 MCM10Q7L590 875 aa21.84■■□□□ 1.09
PSEN1-224ENST00000559361 NUP98P52948 1817 aa21.84■■□□□ 1.09
PSEN1-224ENST00000559361 HOXA10P31260 410 aaPredicted RBP21.83■■□□□ 1.09
PSEN1-224ENST00000559361 NEUROD2Q15784 382 aa21.83■■□□□ 1.09
PSEN1-224ENST00000559361 ABT1Q9ULW3 272 aaKnown RBP21.83■■□□□ 1.09
PSEN1-224ENST00000559361 RRP7AQ9Y3A4 280 aaKnown RBP21.83■■□□□ 1.09
PSEN1-224ENST00000559361 SCNN1DP51172 638 aa21.82■■□□□ 1.08
PSEN1-224ENST00000559361 EIF6P56537 245 aaKnown RBP21.82■■□□□ 1.08
PSEN1-224ENST00000559361 TRIM35Q9UPQ4 493 aa21.82■■□□□ 1.08
PSEN1-224ENST00000559361 ABCC12Q96J65 1359 aa21.82■■□□□ 1.08
PSEN1-224ENST00000559361 GTF2E1P29083 439 aaPredicted RBP21.81■■□□□ 1.08
PSEN1-224ENST00000559361 GRIPAP1Q4V328 841 aa21.81■■□□□ 1.08
PSEN1-224ENST00000559361 ERVV-1B6SEH8 477 aa21.8■■□□□ 1.08
PSEN1-224ENST00000559361 EPS15P42566 896 aa21.8■■□□□ 1.08
PSEN1-224ENST00000559361 FMR1Q06787 632 aaKnown RBP eCLIP21.8■■□□□ 1.08
PSEN1-224ENST00000559361 CST9Q5W186 159 aa21.8■■□□□ 1.08
PSEN1-224ENST00000559361 CAPNS2Q96L46 248 aa21.8■■□□□ 1.08
PSEN1-224ENST00000559361 NYXQ9GZU5 481 aa21.8■■□□□ 1.08
PSEN1-224ENST00000559361 RIC1Q4ADV7 1423 aa21.8■■□□□ 1.08
PSEN1-224ENST00000559361 RGS19P49795 217 aa21.79■■□□□ 1.08
PSEN1-224ENST00000559361 HNRNPUQ00839 825 aaKnown RBP eCLIP21.79■■□□□ 1.08
PSEN1-224ENST00000559361 DCTN1Q14203 1278 aa21.79■■□□□ 1.08
PSEN1-224ENST00000559361 TAF7Q15545 349 aaPredicted RBP21.79■■□□□ 1.08
PSEN1-224ENST00000559361 FAM161AQ3B820 660 aa21.79■■□□□ 1.08
PSEN1-224ENST00000559361 USP50Q70EL3 339 aaPredicted RBP21.79■■□□□ 1.08
PSEN1-224ENST00000559361 NUTM1Q86Y26 1132 aa21.79■■□□□ 1.08
PSEN1-224ENST00000559361 WWC1Q8IX03 1113 aa21.79■■□□□ 1.08
PSEN1-224ENST00000559361 BABAM1Q9NWV8 329 aa21.79■■□□□ 1.08
PSEN1-224ENST00000559361 GJA3Q9Y6H8 435 aa21.79■■□□□ 1.08
PSEN1-224ENST00000559361 LAMB4A4D0S4 1761 aa21.79■■□□□ 1.08
PSEN1-224ENST00000559361 LMOD1P29536 600 aaPredicted RBP21.78■■□□□ 1.08
PSEN1-224ENST00000559361 ECE1P42892 770 aa21.78■■□□□ 1.08
PSEN1-224ENST00000559361 WDR63Q8IWG1 891 aa21.78■■□□□ 1.08
PSEN1-224ENST00000559361 GPR101Q96P66 508 aaPredicted RBP21.78■■□□□ 1.08
PSEN1-224ENST00000559361 IL16Q14005 1332 aa21.78■■□□□ 1.08
PSEN1-224ENST00000559361 IBTKQ9P2D0 1353 aaPredicted RBP21.77■■□□□ 1.08
PSEN1-224ENST00000559361 CYP4F22Q6NT55 531 aa21.77■■□□□ 1.08
PSEN1-224ENST00000559361 CRAMP1Q96RY5 1269 aa21.77■■□□□ 1.08
PSEN1-224ENST00000559361 TLL2Q9Y6L7 1015 aa21.77■■□□□ 1.08
PSEN1-224ENST00000559361 MAP3K15Q6ZN16 1313 aa21.77■■□□□ 1.07
PSEN1-224ENST00000559361 LARGE2Q8N3Y3 721 aa21.76■■□□□ 1.07
PSEN1-224ENST00000559361 ZNF521Q96K83 1311 aa21.76■■□□□ 1.07
PSEN1-224ENST00000559361 MAP2K2P36507 400 aa21.75■■□□□ 1.07
PSEN1-224ENST00000559361 ZBED9Q6R2W3 1325 aa21.75■■□□□ 1.07
PSEN1-224ENST00000559361 UBN2Q6ZU65 1347 aa21.75■■□□□ 1.07
PSEN1-224ENST00000559361 TRAF5O00463 557 aa21.74■■□□□ 1.07
PSEN1-224ENST00000559361 SLC51AQ86UW1 340 aa21.74■■□□□ 1.07
PSEN1-224ENST00000559361 RPGRQ92834 1020 aaKnown RBP21.74■■□□□ 1.07
PSEN1-224ENST00000559361 BEGAINQ9BUH8 593 aa21.74■■□□□ 1.07
PSEN1-224ENST00000559361 IFT57Q9NWB7 429 aa21.74■■□□□ 1.07
PSEN1-224ENST00000559361 MIS18AQ9NYP9 233 aa21.74■■□□□ 1.07
PSEN1-224ENST00000559361 SUSD4Q5VX71 490 aa21.73■■□□□ 1.07
PSEN1-224ENST00000559361 TTLL7Q6ZT98 887 aa21.73■■□□□ 1.07
PSEN1-224ENST00000559361 VPS33BQ9H267 617 aa21.73■■□□□ 1.07
PSEN1-224ENST00000559361 CASP8AP2Q9UKL3 1982 aa21.72■■□□□ 1.07
PSEN1-224ENST00000559361 KDM3BQ7LBC6 1761 aa21.72■■□□□ 1.07
PSEN1-224ENST00000559361 GNAI1P63096 354 aa21.72■■□□□ 1.07
PSEN1-224ENST00000559361 ZNF34Q8IZ26 560 aa21.72■■□□□ 1.07
PSEN1-224ENST00000559361 RBM17Q96I25 401 aaKnown RBP21.72■■□□□ 1.07
PSEN1-224ENST00000559361 CFAP44Q96MT7 982 aa21.72■■□□□ 1.07
PSEN1-224ENST00000559361 GPRC5DQ9NZD1 345 aa21.72■■□□□ 1.07
PSEN1-224ENST00000559361 PDE4DIPQ5VU43 2346 aa21.71■■□□□ 1.07
PSEN1-224ENST00000559361 PPEF1O14829 653 aaPredicted RBP21.71■■□□□ 1.07
PSEN1-224ENST00000559361 MLLT1Q03111 559 aaPredicted RBP21.71■■□□□ 1.07
PSEN1-224ENST00000559361 SAPCD2Q86UD0 394 aa21.71■■□□□ 1.07
PSEN1-224ENST00000559361 NIM1KQ8IY84 436 aa21.71■■□□□ 1.07
PSEN1-224ENST00000559361 THUMPD2Q9BTF0 503 aaKnown RBP21.71■■□□□ 1.07
PSEN1-224ENST00000559361 ADARB2Q9NS39 739 aaKnown RBP21.71■■□□□ 1.07
PSEN1-224ENST00000559361 PGAP2Q9UHJ9 254 aa21.71■■□□□ 1.07
PSEN1-224ENST00000559361 SALL2Q9Y467 1007 aaPredicted RBP21.71■■□□□ 1.07
PSEN1-224ENST00000559361 DLG5Q8TDM6 1919 aa21.7■■□□□ 1.07
PSEN1-224ENST00000559361 CCDC85CA6NKD9 419 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms