RNA–Protein interactions for RNA: ENST00000559347.1

SPG11-216, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 716 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-216ENST00000559347 RNF123Q5XPI4 1314 aa14.18□□□□□ -0.14
SPG11-216ENST00000559347 C21orf2O43822 256 aa14.18□□□□□ -0.14
SPG11-216ENST00000559347 GTF2E1P29083 439 aaPredicted RBP14.18□□□□□ -0.14
SPG11-216ENST00000559347 HSP90AB3PQ58FF7 597 aa14.18□□□□□ -0.14
SPG11-216ENST00000559347 FAM9BQ8IZU0 186 aa14.18□□□□□ -0.14
SPG11-216ENST00000559347 C8orf58Q8NAV2 365 aa14.18□□□□□ -0.14
SPG11-216ENST00000559347 ZNF526Q8TF50 670 aaPredicted RBP14.18□□□□□ -0.14
SPG11-216ENST00000559347 HYPKQ9NX55 129 aa14.18□□□□□ -0.14
SPG11-216ENST00000559347 RNF181Q9P0P0 153 aa14.18□□□□□ -0.14
SPG11-216ENST00000559347 TAF1P21675 1872 aa14.18□□□□□ -0.14
SPG11-216ENST00000559347 SNED1Q8TER0 1413 aa14.17□□□□□ -0.14
SPG11-216ENST00000559347 ELL2O00472 640 aaPredicted RBP14.17□□□□□ -0.14
SPG11-216ENST00000559347 PRELPP51888 382 aa14.17□□□□□ -0.14
SPG11-216ENST00000559347 PPP1R42Q7Z4L9 355 aa14.17□□□□□ -0.14
SPG11-216ENST00000559347 PLBD2Q8NHP8 589 aa14.17□□□□□ -0.14
SPG11-216ENST00000559347 ZNF219Q9P2Y4 722 aaPredicted RBP14.17□□□□□ -0.14
SPG11-216ENST00000559347 MYH3P11055 1940 aa14.17□□□□□ -0.14
SPG11-216ENST00000559347 LTBP3Q9NS15 1303 aa14.16□□□□□ -0.14
SPG11-216ENST00000559347 FANCIQ9NVI1 1328 aa14.16□□□□□ -0.14
SPG11-216ENST00000559347 ZC3H4Q9UPT8 1303 aaKnown RBP14.16□□□□□ -0.14
SPG11-216ENST00000559347 LMNB1P20700 586 aa14.16□□□□□ -0.14
SPG11-216ENST00000559347 NLRP10Q86W26 655 aa14.16□□□□□ -0.14
SPG11-216ENST00000559347 TSPYL6Q8N831 410 aa14.16□□□□□ -0.14
SPG11-216ENST00000559347 TCIRG1Q13488 830 aa14.15□□□□□ -0.14
SPG11-216ENST00000559347 SOGA3Q5TF21 947 aa14.15□□□□□ -0.14
SPG11-216ENST00000559347 ANKRD13DQ6ZTN6 518 aa14.15□□□□□ -0.14
SPG11-216ENST00000559347 C7orf43Q8WVR3 580 aa14.15□□□□□ -0.14
SPG11-216ENST00000559347 UTP14AQ9BVJ6 771 aaKnown RBP14.15□□□□□ -0.14
SPG11-216ENST00000559347 WDR90Q96KV7 1748 aa14.15□□□□□ -0.14
SPG11-216ENST00000559347 CEP350Q5VT06 3117 aa14.14□□□□□ -0.15
SPG11-216ENST00000559347 C3orf67Q6ZVT6 689 aa14.14□□□□□ -0.15
SPG11-216ENST00000559347 TAOK3Q9H2K8 898 aa14.14□□□□□ -0.15
SPG11-216ENST00000559347 PHAXQ9H814 394 aaKnown RBP14.14□□□□□ -0.15
SPG11-216ENST00000559347 SALL2Q9Y467 1007 aaPredicted RBP14.14□□□□□ -0.15
SPG11-216ENST00000559347 ALDH1B1P30837 517 aa14.13□□□□□ -0.15
SPG11-216ENST00000559347 HOXA10P31260 410 aaPredicted RBP14.13□□□□□ -0.15
SPG11-216ENST00000559347 C1QTNF8P60827 252 aa14.13□□□□□ -0.15
SPG11-216ENST00000559347 GOLGA2Q08379 1002 aa14.13□□□□□ -0.15
SPG11-216ENST00000559347 TWISTNBQ3B726 338 aaPredicted RBP14.13□□□□□ -0.15
SPG11-216ENST00000559347 CCDC93Q567U6 631 aa14.13□□□□□ -0.15
SPG11-216ENST00000559347 CCDC30Q5VVM6 783 aa14.13□□□□□ -0.15
SPG11-216ENST00000559347 WDR63Q8IWG1 891 aa14.13□□□□□ -0.15
SPG11-216ENST00000559347 RPGRQ92834 1020 aaKnown RBP14.13□□□□□ -0.15
SPG11-216ENST00000559347 ISCA1Q9BUE6 129 aa14.13□□□□□ -0.15
SPG11-216ENST00000559347 COL4A1P02462 1669 aa14.13□□□□□ -0.15
SPG11-216ENST00000559347 KIF3CO14782 793 aa14.12□□□□□ -0.15
SPG11-216ENST00000559347 SLC10A5Q5PT55 438 aa14.12□□□□□ -0.15
SPG11-216ENST00000559347 OLFM4Q6UX06 510 aa14.12□□□□□ -0.15
SPG11-216ENST00000559347 CHMP4AQ9BY43 222 aa14.12□□□□□ -0.15
SPG11-216ENST00000559347 TRMT112Q9UI30 125 aaKnown RBP14.12□□□□□ -0.15
SPG11-216ENST00000559347 SPEF2Q9C093 1822 aa14.12□□□□□ -0.15
SPG11-216ENST00000559347 SH3TC1Q8TE82 1336 aa14.12□□□□□ -0.15
SPG11-216ENST00000559347 LTBP1Q14766 1721 aa14.11□□□□□ -0.15
SPG11-216ENST00000559347 NLRP3Q96P20 1036 aa14.11□□□□□ -0.15
SPG11-216ENST00000559347 NMRK2Q9NPI5 230 aa14.11□□□□□ -0.15
SPG11-216ENST00000559347 SPINK5Q9NQ38 1064 aaPredicted RBP14.11□□□□□ -0.15
SPG11-216ENST00000559347 KDM2BQ8NHM5 1336 aa14.11□□□□□ -0.15
SPG11-216ENST00000559347 ZNF521Q96K83 1311 aa14.11□□□□□ -0.15
SPG11-216ENST00000559347 ATP5J2-PTCD1G3V325 749 aa14.1□□□□□ -0.15
SPG11-216ENST00000559347 RIC3Q7Z5B4 369 aa14.1□□□□□ -0.15
SPG11-216ENST00000559347 SYNE4Q8N205 404 aa14.1□□□□□ -0.15
SPG11-216ENST00000559347 ZNF428Q96B54 188 aa14.1□□□□□ -0.15
SPG11-216ENST00000559347 CRAMP1Q96RY5 1269 aa14.1□□□□□ -0.15
SPG11-216ENST00000559347 STK31Q9BXU1 1019 aa14.1□□□□□ -0.15
SPG11-216ENST00000559347 COL4A5P29400 1685 aa14.1□□□□□ -0.15
SPG11-216ENST00000559347 ABCC4O15439 1325 aa14.1□□□□□ -0.15
SPG11-216ENST00000559347 DUOX1Q9NRD9 1551 aa14.09□□□□□ -0.15
SPG11-216ENST00000559347 SCN4AP35499 1836 aa14.09□□□□□ -0.15
SPG11-216ENST00000559347 PPEF1O14829 653 aaPredicted RBP14.09□□□□□ -0.15
SPG11-216ENST00000559347 HCLS1P14317 486 aaPredicted RBP14.09□□□□□ -0.15
SPG11-216ENST00000559347 FKBP4Q02790 459 aaKnown RBP eCLIP14.09□□□□□ -0.15
SPG11-216ENST00000559347 TRIM28Q13263 835 aaKnown RBP14.09□□□□□ -0.15
SPG11-216ENST00000559347 SLC51AQ86UW1 340 aa14.09□□□□□ -0.15
SPG11-216ENST00000559347 RBM17Q96I25 401 aaKnown RBP14.09□□□□□ -0.15
SPG11-216ENST00000559347 TCERG1O14776 1098 aaKnown RBP14.08□□□□□ -0.16
SPG11-216ENST00000559347 DDX58O95786 925 aaKnown RBP14.08□□□□□ -0.16
SPG11-216ENST00000559347 MYD88Q99836 296 aa14.08□□□□□ -0.16
SPG11-216ENST00000559347 GLTPD2A6NH11 291 aa14.07□□□□□ -0.16
SPG11-216ENST00000559347 CCER2I3L3R5 266 aa14.07□□□□□ -0.16
SPG11-216ENST00000559347 EXOSC9Q06265 439 aaKnown RBP14.07□□□□□ -0.16
SPG11-216ENST00000559347 CC2D2BQ6DHV5 1058 aa14.07□□□□□ -0.16
SPG11-216ENST00000559347 RTKN2Q8IZC4 609 aa14.07□□□□□ -0.16
SPG11-216ENST00000559347 FAM89AQ96GI7 184 aa14.07□□□□□ -0.16
SPG11-216ENST00000559347 PSMD1Q99460 953 aa14.07□□□□□ -0.16
SPG11-216ENST00000559347 METTL22Q9BUU2 404 aaPredicted RBP14.07□□□□□ -0.16
SPG11-216ENST00000559347 MYH16Q9H6N6 1097 aa14.07□□□□□ -0.16
SPG11-216ENST00000559347 G2E3Q7L622 706 aa14.06□□□□□ -0.16
SPG11-216ENST00000559347 MAP3K2Q9Y2U5 619 aa14.06□□□□□ -0.16
SPG11-216ENST00000559347 PI4KAP2A4QPH2 592 aa14.05□□□□□ -0.16
SPG11-216ENST00000559347 VAMP4O75379 141 aa14.05□□□□□ -0.16
SPG11-216ENST00000559347 SLC4A2P04920 1241 aa14.05□□□□□ -0.16
SPG11-216ENST00000559347 FLIIQ13045 1269 aa14.05□□□□□ -0.16
SPG11-216ENST00000559347 RTL5Q5HYW3 569 aaPredicted RBP14.05□□□□□ -0.16
SPG11-216ENST00000559347 KSR2Q6VAB6 950 aa14.05□□□□□ -0.16
SPG11-216ENST00000559347 PI4KAP1Q8N8J0 262 aa14.05□□□□□ -0.16
SPG11-216ENST00000559347 ZBTB38Q8NAP3 1195 aaPredicted RBP14.05□□□□□ -0.16
SPG11-216ENST00000559347 CCDC191Q8NCU4 936 aa14.05□□□□□ -0.16
SPG11-216ENST00000559347 ZNF277Q9NRM2 450 aaPredicted RBP14.05□□□□□ -0.16
SPG11-216ENST00000559347 A0A1B0GUL6 1792 aa14.04□□□□□ -0.16
SPG11-216ENST00000559347 ADAMTSL1Q8N6G6 1762 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms