RNA–Protein interactions for RNA: ENST00000559175.1

CTDSPL2-206, Transcript of CTD small phosphatase like 2, humanhuman

TSL 2

Gene CTDSPL2, Length 3,609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-206ENST00000559175 MARF1Q9Y4F3 1742 aaKnown RBP7.06□□□□□ -1.28
CTDSPL2-206ENST00000559175 NLRP6P59044 892 aa7.06□□□□□ -1.28
CTDSPL2-206ENST00000559175 GNL2Q13823 731 aaKnown RBP7.06□□□□□ -1.28
CTDSPL2-206ENST00000559175 SLC4A10Q6U841 1118 aa7.06□□□□□ -1.28
CTDSPL2-206ENST00000559175 TMUB1Q9BVT8 246 aa7.06□□□□□ -1.28
CTDSPL2-206ENST00000559175 MRVI1Q9Y6F6 885 aa7.06□□□□□ -1.28
CTDSPL2-206ENST00000559175 PLIN1O60240 522 aa7.06□□□□□ -1.28
CTDSPL2-206ENST00000559175 PRIM1P49642 420 aaKnown RBP7.06□□□□□ -1.28
CTDSPL2-206ENST00000559175 C1QTNF12Q5T7M4 302 aa7.06□□□□□ -1.28
CTDSPL2-206ENST00000559175 RNF34Q969K3 372 aa7.06□□□□□ -1.28
CTDSPL2-206ENST00000559175 GJD4Q96KN9 370 aaPredicted RBP7.06□□□□□ -1.28
CTDSPL2-206ENST00000559175 MUC3BQ9H195 1237 aa7.06□□□□□ -1.28
CTDSPL2-206ENST00000559175 MRS2Q9HD23 443 aa7.06□□□□□ -1.28
CTDSPL2-206ENST00000559175 FAM217BQ9NTX9 383 aaPredicted RBP7.06□□□□□ -1.28
CTDSPL2-206ENST00000559175 BPNT1O95861 308 aa7.06□□□□□ -1.28
CTDSPL2-206ENST00000559175 P4HBP07237 508 aaKnown RBP7.06□□□□□ -1.28
CTDSPL2-206ENST00000559175 OSBPP22059 807 aa7.06□□□□□ -1.28
CTDSPL2-206ENST00000559175 NEXNQ0ZGT2 675 aa7.06□□□□□ -1.28
CTDSPL2-206ENST00000559175 EFCAB2Q5VUJ9 269 aa7.06□□□□□ -1.28
CTDSPL2-206ENST00000559175 DRC7Q8IY82 874 aa7.06□□□□□ -1.28
CTDSPL2-206ENST00000559175 FAM126AQ9BYI3 521 aaPredicted RBP7.06□□□□□ -1.28
CTDSPL2-206ENST00000559175 TIMM44O43615 452 aa7.05□□□□□ -1.28
CTDSPL2-206ENST00000559175 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.05□□□□□ -1.28
CTDSPL2-206ENST00000559175 NDUFB9Q9Y6M9 179 aa7.05□□□□□ -1.28
CTDSPL2-206ENST00000559175 SPDYE16A6NNV3 312 aaPredicted RBP7.05□□□□□ -1.28
CTDSPL2-206ENST00000559175 MAP3K7O43318 606 aa7.05□□□□□ -1.28
CTDSPL2-206ENST00000559175 SLC26A4O43511 780 aa7.05□□□□□ -1.28
CTDSPL2-206ENST00000559175 MAP2K1Q02750 393 aaPredicted RBP7.05□□□□□ -1.28
CTDSPL2-206ENST00000559175 RBL2Q08999 1139 aa7.05□□□□□ -1.28
CTDSPL2-206ENST00000559175 NBPF6Q5VWK0 638 aa7.05□□□□□ -1.28
CTDSPL2-206ENST00000559175 KSR2Q6VAB6 950 aa7.05□□□□□ -1.28
CTDSPL2-206ENST00000559175 NBPF5PQ86XG9 351 aaPredicted RBP7.05□□□□□ -1.28
CTDSPL2-206ENST00000559175 RSPH1Q8WYR4 309 aa7.05□□□□□ -1.28
CTDSPL2-206ENST00000559175 NBPF4Q96M43 638 aa7.05□□□□□ -1.28
CTDSPL2-206ENST00000559175 PDCL3Q9H2J4 239 aa7.05□□□□□ -1.28
CTDSPL2-206ENST00000559175 KIF1BO60333 1816 aa7.05□□□□□ -1.28
CTDSPL2-206ENST00000559175 LRRC7Q96NW7 1537 aa7.05□□□□□ -1.28
CTDSPL2-206ENST00000559175 KRT18P05783 430 aaKnown RBP7.05□□□□□ -1.28
CTDSPL2-206ENST00000559175 EPAS1Q99814 870 aa7.05□□□□□ -1.28
CTDSPL2-206ENST00000559175 TGIF2Q9GZN2 237 aa7.05□□□□□ -1.28
CTDSPL2-206ENST00000559175 PRSS47A8MTI9 375 aa7.04□□□□□ -1.28
CTDSPL2-206ENST00000559175 HCLS1P14317 486 aaPredicted RBP7.04□□□□□ -1.28
CTDSPL2-206ENST00000559175 PPP4R3BQ5MIZ7 849 aa7.04□□□□□ -1.28
CTDSPL2-206ENST00000559175 CCDC174Q6PII3 467 aa7.04□□□□□ -1.28
CTDSPL2-206ENST00000559175 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.04□□□□□ -1.28
CTDSPL2-206ENST00000559175 MCF2L2Q86YR7 1114 aa7.04□□□□□ -1.28
CTDSPL2-206ENST00000559175 SRPK1Q96SB4 655 aaKnown RBP7.04□□□□□ -1.28
CTDSPL2-206ENST00000559175 CEP89Q96ST8 783 aa7.04□□□□□ -1.28
CTDSPL2-206ENST00000559175 BRINP2Q9C0B6 783 aa7.04□□□□□ -1.28
CTDSPL2-206ENST00000559175 FANCLQ9NW38 375 aa7.04□□□□□ -1.28
CTDSPL2-206ENST00000559175 DHX57Q6P158 1386 aaKnown RBP7.04□□□□□ -1.28
CTDSPL2-206ENST00000559175 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.04□□□□□ -1.28
CTDSPL2-206ENST00000559175 NHSL1Q5SYE7 1610 aa7.04□□□□□ -1.28
CTDSPL2-206ENST00000559175 CENPJQ9HC77 1338 aaPredicted RBP7.04□□□□□ -1.28
CTDSPL2-206ENST00000559175 MYOM2P54296 1465 aa7.04□□□□□ -1.28
CTDSPL2-206ENST00000559175 JAMLQ86YT9 394 aa7.04□□□□□ -1.28
CTDSPL2-206ENST00000559175 C8orf48Q96LL4 319 aa7.04□□□□□ -1.28
CTDSPL2-206ENST00000559175 RNPC3Q96LT9 517 aaKnown RBP7.04□□□□□ -1.28
CTDSPL2-206ENST00000559175 VTI1BQ9UEU0 232 aa7.04□□□□□ -1.28
CTDSPL2-206ENST00000559175 MYOM1P52179 1685 aa7.04□□□□□ -1.28
CTDSPL2-206ENST00000559175 NLRP1Q9C000 1473 aa7.04□□□□□ -1.28
CTDSPL2-206ENST00000559175 CAPN15O75808 1086 aa7.03□□□□□ -1.28
CTDSPL2-206ENST00000559175 ZNF76P36508 570 aa7.03□□□□□ -1.28
CTDSPL2-206ENST00000559175 ANP32AP39687 249 aaKnown RBP7.03□□□□□ -1.28
CTDSPL2-206ENST00000559175 PTGDRQ13258 359 aa7.03□□□□□ -1.28
CTDSPL2-206ENST00000559175 C14orf80Q86SX3 495 aa7.03□□□□□ -1.28
CTDSPL2-206ENST00000559175 AVENQ9NQS1 362 aaPredicted RBP7.03□□□□□ -1.28
CTDSPL2-206ENST00000559175 NOS1P29475 1434 aa7.03□□□□□ -1.28
CTDSPL2-206ENST00000559175 RASSF7Q02833 373 aa7.03□□□□□ -1.28
CTDSPL2-206ENST00000559175 SIM2Q14190 667 aaPredicted RBP7.03□□□□□ -1.28
CTDSPL2-206ENST00000559175 WASHC4Q2M389 1173 aa7.03□□□□□ -1.28
CTDSPL2-206ENST00000559175 PODNQ7Z5L7 613 aa7.03□□□□□ -1.28
CTDSPL2-206ENST00000559175 VPS37AQ8NEZ2 397 aa7.03□□□□□ -1.28
CTDSPL2-206ENST00000559175 ASB16Q96NS5 453 aa7.03□□□□□ -1.28
CTDSPL2-206ENST00000559175 COL24A1Q17RW2 1714 aa7.03□□□□□ -1.28
CTDSPL2-206ENST00000559175 PTPRMP28827 1452 aa7.03□□□□□ -1.28
CTDSPL2-206ENST00000559175 PHRF1Q9P1Y6 1649 aaKnown RBP7.03□□□□□ -1.28
CTDSPL2-206ENST00000559175 IFRD1O00458 451 aaPredicted RBP7.03□□□□□ -1.28
CTDSPL2-206ENST00000559175 PPP1R12AO14974 1030 aaPredicted RBP7.03□□□□□ -1.28
CTDSPL2-206ENST00000559175 POU5F1BQ06416 359 aa7.03□□□□□ -1.28
CTDSPL2-206ENST00000559175 EPS8L1Q8TE68 723 aa7.03□□□□□ -1.28
CTDSPL2-206ENST00000559175 EVLQ9UI08 416 aaPredicted RBP7.03□□□□□ -1.28
CTDSPL2-206ENST00000559175 GJA3Q9Y6H8 435 aa7.03□□□□□ -1.28
CTDSPL2-206ENST00000559175 SETD5Q9C0A6 1442 aa7.02□□□□□ -1.28
CTDSPL2-206ENST00000559175 PRMT3O60678 531 aa7.02□□□□□ -1.29
CTDSPL2-206ENST00000559175 CDC27P30260 824 aa7.02□□□□□ -1.29
CTDSPL2-206ENST00000559175 PPP2R2DQ66LE6 453 aa7.02□□□□□ -1.29
CTDSPL2-206ENST00000559175 PCGF5Q86SE9 256 aa7.02□□□□□ -1.29
CTDSPL2-206ENST00000559175 MST1RQ04912 1400 aa7.02□□□□□ -1.29
CTDSPL2-206ENST00000559175 CLTCL1P53675 1640 aa7.02□□□□□ -1.29
CTDSPL2-206ENST00000559175 MAPK8P45983 427 aa7.02□□□□□ -1.29
CTDSPL2-206ENST00000559175 CHMP4BP1P59074 171 aa7.02□□□□□ -1.29
CTDSPL2-206ENST00000559175 CCDC93Q567U6 631 aa7.02□□□□□ -1.29
CTDSPL2-206ENST00000559175 DUSP27Q5VZP5 1158 aa7.02□□□□□ -1.29
CTDSPL2-206ENST00000559175 SETDB2Q96T68 719 aa7.02□□□□□ -1.29
CTDSPL2-206ENST00000559175 MKNK1Q9BUB5 465 aa7.02□□□□□ -1.29
CTDSPL2-206ENST00000559175 SHPRHQ149N8 1683 aa7.02□□□□□ -1.29
CTDSPL2-206ENST00000559175 FGAP02671 866 aa7.02□□□□□ -1.29
CTDSPL2-206ENST00000559175 XRCC5P13010 732 aaKnown RBP7.02□□□□□ -1.29
CTDSPL2-206ENST00000559175 ZRSR2Q15696 482 aaKnown RBP7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms