RNA–Protein interactions for RNA: ENST00000558924.1

SEC11A-206, Transcript of SEC11 homolog A, signal peptidase complex subunit, humanhuman

TSL 1 (best)

Gene SEC11A, Length 3,626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC11A-206ENST00000558924 BEND3Q5T5X7 828 aa14.44□□□□□ -0.1
SEC11A-206ENST00000558924 DDX11Q96FC9 970 aa14.44□□□□□ -0.1
SEC11A-206ENST00000558924 TRIM5Q9C035 493 aa14.44□□□□□ -0.1
SEC11A-206ENST00000558924 PRDM11Q9NQV5 511 aa14.44□□□□□ -0.1
SEC11A-206ENST00000558924 SPATA31D1Q6ZQQ2 1576 aa14.44□□□□□ -0.1
SEC11A-206ENST00000558924 NOLC1Q14978 699 aaKnown RBP eCLIP14.44□□□□□ -0.11e-21■■■□□ 14.6
SEC11A-206ENST00000558924 HSP90AB4PQ58FF6 505 aa14.44□□□□□ -0.1
SEC11A-206ENST00000558924 RUFY2Q8WXA3 655 aa14.44□□□□□ -0.1
SEC11A-206ENST00000558924 ZNF496Q96IT1 587 aaPredicted RBP14.44□□□□□ -0.1
SEC11A-206ENST00000558924 A0A087WZG4 1122 aa14.43□□□□□ -0.1
SEC11A-206ENST00000558924 PTH1RQ03431 593 aa14.43□□□□□ -0.1
SEC11A-206ENST00000558924 DDX46Q7L014 1031 aaKnown RBP14.43□□□□□ -0.1
SEC11A-206ENST00000558924 KIF3AQ9Y496 699 aa14.43□□□□□ -0.1
SEC11A-206ENST00000558924 GRM8O00222 908 aa14.43□□□□□ -0.1
SEC11A-206ENST00000558924 GLRX3O76003 335 aaKnown RBP14.43□□□□□ -0.1
SEC11A-206ENST00000558924 GTPBP4Q9BZE4 634 aaKnown RBP14.43□□□□□ -0.1
SEC11A-206ENST00000558924 ECHDC1Q9NTX5 307 aa14.43□□□□□ -0.1
SEC11A-206ENST00000558924 GIGYF1O75420 1035 aaPredicted RBP14.43□□□□□ -0.1
SEC11A-206ENST00000558924 KSR2Q6VAB6 950 aa14.43□□□□□ -0.1
SEC11A-206ENST00000558924 FMNL2Q96PY5 1086 aa14.43□□□□□ -0.1
SEC11A-206ENST00000558924 SNRKQ9NRH2 765 aa14.43□□□□□ -0.1
SEC11A-206ENST00000558924 PDRG1Q9NUG6 133 aa14.43□□□□□ -0.1
SEC11A-206ENST00000558924 WDR33Q9C0J8 1336 aaKnown RBP14.42□□□□□ -0.1
SEC11A-206ENST00000558924 KIF20AO95235 890 aa14.42□□□□□ -0.1
SEC11A-206ENST00000558924 CDK11BP21127 795 aaKnown RBP14.42□□□□□ -0.1
SEC11A-206ENST00000558924 TAF7LQ5H9L4 462 aa14.42□□□□□ -0.1
SEC11A-206ENST00000558924 RGS12O14924 1447 aa14.42□□□□□ -0.1
SEC11A-206ENST00000558924 HTATSF1O43719 755 aaKnown RBP14.42□□□□□ -0.1
SEC11A-206ENST00000558924 RAB11FIP3O75154 756 aa14.42□□□□□ -0.1
SEC11A-206ENST00000558924 CCDC129Q6ZRS4 1044 aa14.42□□□□□ -0.1
SEC11A-206ENST00000558924 SSH3Q8TE77 659 aa14.42□□□□□ -0.1
SEC11A-206ENST00000558924 DLG5Q8TDM6 1919 aa14.42□□□□□ -0.1
SEC11A-206ENST00000558924 ADCK5Q3MIX3 580 aa14.42□□□□□ -0.1
SEC11A-206ENST00000558924 SLFNL1Q499Z3 407 aa14.42□□□□□ -0.1
SEC11A-206ENST00000558924 AMOTQ4VCS5 1084 aa14.42□□□□□ -0.1
SEC11A-206ENST00000558924 IBTKQ9P2D0 1353 aaPredicted RBP14.42□□□□□ -0.1
SEC11A-206ENST00000558924 LETM1O95202 739 aaPredicted RBP14.41□□□□□ -0.1
SEC11A-206ENST00000558924 RAB11FIP4Q86YS3 637 aa14.41□□□□□ -0.1
SEC11A-206ENST00000558924 STK11IPQ8N1F8 1099 aa14.41□□□□□ -0.1
SEC11A-206ENST00000558924 CYP46A1Q9Y6A2 500 aa14.41□□□□□ -0.1
SEC11A-206ENST00000558924 A0A087WWV3 80 aa14.41□□□□□ -0.1
SEC11A-206ENST00000558924 ERICH4A6NGS2 130 aa14.41□□□□□ -0.1
SEC11A-206ENST00000558924 HSP90AB3PQ58FF7 597 aa14.41□□□□□ -0.1
SEC11A-206ENST00000558924 LARP1BQ659C4 914 aaKnown RBP14.41□□□□□ -0.1
SEC11A-206ENST00000558924 EAF2Q96CJ1 260 aaPredicted RBP14.41□□□□□ -0.1
SEC11A-206ENST00000558924 NMIQ13287 307 aaPredicted RBP14.4□□□□□ -0.1
SEC11A-206ENST00000558924 ZNF790Q6PG37 636 aa14.4□□□□□ -0.1
SEC11A-206ENST00000558924 FILIP1Q7Z7B0 1213 aa14.4□□□□□ -0.1
SEC11A-206ENST00000558924 SNX14Q9Y5W7 946 aa14.4□□□□□ -0.1
SEC11A-206ENST00000558924 GJB2P29033 226 aa14.4□□□□□ -0.1
SEC11A-206ENST00000558924 ANKRD13DQ6ZTN6 518 aa14.4□□□□□ -0.1
SEC11A-206ENST00000558924 USP31Q70CQ4 1352 aa14.4□□□□□ -0.1
SEC11A-206ENST00000558924 RIOK3O14730 519 aaKnown RBP14.4□□□□□ -0.1
SEC11A-206ENST00000558924 STX6O43752 255 aa14.4□□□□□ -0.1
SEC11A-206ENST00000558924 FKBP4Q02790 459 aaKnown RBP eCLIP14.4□□□□□ -0.1
SEC11A-206ENST00000558924 CHST3Q7LGC8 479 aa14.39□□□□□ -0.11
SEC11A-206ENST00000558924 LUZP1Q86V48 1076 aa14.39□□□□□ -0.11
SEC11A-206ENST00000558924 TRMT1Q9NXH9 659 aaKnown RBP14.39□□□□□ -0.11
SEC11A-206ENST00000558924 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.39□□□□□ -0.11
SEC11A-206ENST00000558924 LARGE1O95461 756 aa14.39□□□□□ -0.11
SEC11A-206ENST00000558924 SYT1P21579 422 aa14.39□□□□□ -0.11
SEC11A-206ENST00000558924 ARHGEF25Q86VW2 580 aa14.39□□□□□ -0.11
SEC11A-206ENST00000558924 SEC62Q99442 399 aaKnown RBP14.39□□□□□ -0.11
SEC11A-206ENST00000558924 RBM8AQ9Y5S9 174 aaKnown RBP14.39□□□□□ -0.11
SEC11A-206ENST00000558924 SGSM2O43147 1006 aa14.39□□□□□ -0.11
SEC11A-206ENST00000558924 ERCC4Q92889 916 aaPredicted RBP14.39□□□□□ -0.11
SEC11A-206ENST00000558924 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.38□□□□□ -0.11
SEC11A-206ENST00000558924 AGLP35573 1532 aa14.38□□□□□ -0.11
SEC11A-206ENST00000558924 TIMM10P62072 90 aa14.38□□□□□ -0.11
SEC11A-206ENST00000558924 GUCY1B3Q02153 619 aa14.38□□□□□ -0.11
SEC11A-206ENST00000558924 IPO4Q8TEX9 1081 aaKnown RBP14.38□□□□□ -0.11
SEC11A-206ENST00000558924 ZNF594Q96JF6 807 aaPredicted RBP14.38□□□□□ -0.11
SEC11A-206ENST00000558924 HYPKQ9NX55 129 aa14.38□□□□□ -0.11
SEC11A-206ENST00000558924 H3BQV1 296 aa14.38□□□□□ -0.11
SEC11A-206ENST00000558924 A1BGP04217 495 aa14.38□□□□□ -0.11
SEC11A-206ENST00000558924 GPTP24298 496 aa14.38□□□□□ -0.11
SEC11A-206ENST00000558924 IFFO2Q5TF58 517 aa14.38□□□□□ -0.11
SEC11A-206ENST00000558924 LARP1Q6PKG0 1096 aaKnown RBP14.38□□□□□ -0.11
SEC11A-206ENST00000558924 LMBR1LQ6UX01 489 aa14.38□□□□□ -0.11
SEC11A-206ENST00000558924 ZFP91Q96JP5 570 aaPredicted RBP14.38□□□□□ -0.11
SEC11A-206ENST00000558924 PTGS1P23219 599 aa14.38□□□□□ -0.11
SEC11A-206ENST00000558924 EPHA10Q5JZY3 1008 aa14.38□□□□□ -0.11
SEC11A-206ENST00000558924 MCM2P49736 904 aa14.37□□□□□ -0.11
SEC11A-206ENST00000558924 IRX5P78411 483 aaPredicted RBP14.37□□□□□ -0.11
SEC11A-206ENST00000558924 TFCP2Q12800 502 aa14.37□□□□□ -0.11
SEC11A-206ENST00000558924 ZRSR1Q15695 479 aaKnown RBP14.37□□□□□ -0.11
SEC11A-206ENST00000558924 WASHC4Q2M389 1173 aa14.37□□□□□ -0.11
SEC11A-206ENST00000558924 LIMCH1Q9UPQ0 1083 aa14.37□□□□□ -0.11
SEC11A-206ENST00000558924 BRD1O95696 1058 aa14.37□□□□□ -0.11
SEC11A-206ENST00000558924 LRMPQ12912 555 aa14.37□□□□□ -0.11
SEC11A-206ENST00000558924 TPD52L1Q16890 204 aaPredicted RBP14.37□□□□□ -0.11
SEC11A-206ENST00000558924 CCDC183Q5T5S1 534 aa14.37□□□□□ -0.11
SEC11A-206ENST00000558924 LINS1Q8NG48 757 aa14.37□□□□□ -0.11
SEC11A-206ENST00000558924 PI4K2BQ8TCG2 481 aa14.37□□□□□ -0.11
SEC11A-206ENST00000558924 BLOC1S2Q6QNY1 142 aa14.36□□□□□ -0.11
SEC11A-206ENST00000558924 GOLIM4O00461 696 aa14.36□□□□□ -0.11
SEC11A-206ENST00000558924 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.36□□□□□ -0.11
SEC11A-206ENST00000558924 MCM5P33992 734 aa14.36□□□□□ -0.11
SEC11A-206ENST00000558924 CCDC186Q7Z3E2 898 aa14.36□□□□□ -0.11
SEC11A-206ENST00000558924 OSBPL3Q9H4L5 887 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms