RNA–Protein interactions for RNA: ENST00000558919.1

VPS13C-207, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 5

Gene VPS13C, Length 566 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-207ENST00000558919 ADH6P28332 368 aa7.22□□□□□ -1.25
VPS13C-207ENST00000558919 IDH3AP50213 366 aa7.22□□□□□ -1.25
VPS13C-207ENST00000558919 NAA30Q147X3 362 aaPredicted RBP7.22□□□□□ -1.25
VPS13C-207ENST00000558919 SLCO4C1Q6ZQN7 724 aa7.22□□□□□ -1.25
VPS13C-207ENST00000558919 EFCC1Q9HA90 598 aa7.22□□□□□ -1.25
VPS13C-207ENST00000558919 C11orf16Q9NQ32 467 aa7.22□□□□□ -1.25
VPS13C-207ENST00000558919 EPB42P16452 691 aa7.21□□□□□ -1.26
VPS13C-207ENST00000558919 INPP5BP32019 993 aa7.21□□□□□ -1.26
VPS13C-207ENST00000558919 ARSDP51689 593 aa7.21□□□□□ -1.26
VPS13C-207ENST00000558919 SPEM2Q0P670 501 aa7.21□□□□□ -1.26
VPS13C-207ENST00000558919 SLC30A3Q99726 388 aa7.21□□□□□ -1.26
VPS13C-207ENST00000558919 GGA1Q9UJY5 639 aa7.21□□□□□ -1.26
VPS13C-207ENST00000558919 CARNS1A5YM72 827 aa7.2□□□□□ -1.26
VPS13C-207ENST00000558919 NEUROD1Q13562 356 aa7.2□□□□□ -1.26
VPS13C-207ENST00000558919 B4GALNT3Q6L9W6 998 aa7.2□□□□□ -1.26
VPS13C-207ENST00000558919 C1orf229Q6ZS94 237 aaPredicted RBP7.2□□□□□ -1.26
VPS13C-207ENST00000558919 RETREG2Q8NC44 543 aa7.2□□□□□ -1.26
VPS13C-207ENST00000558919 GALNT6Q8NCL4 622 aa7.2□□□□□ -1.26
VPS13C-207ENST00000558919 EDARADDQ8WWZ3 215 aa7.2□□□□□ -1.26
VPS13C-207ENST00000558919 KLF15Q9UIH9 416 aa7.2□□□□□ -1.26
VPS13C-207ENST00000558919 ADAMTS8Q9UP79 889 aa7.2□□□□□ -1.26
VPS13C-207ENST00000558919 DNMT3AQ9Y6K1 912 aaPredicted RBP7.2□□□□□ -1.26
VPS13C-207ENST00000558919 NEURL1BA8MQ27 555 aa7.19□□□□□ -1.26
VPS13C-207ENST00000558919 TNFRSF10BO14763 440 aa7.19□□□□□ -1.26
VPS13C-207ENST00000558919 SIN3BO75182 1162 aa7.19□□□□□ -1.26
VPS13C-207ENST00000558919 GRIN2CQ14957 1233 aa7.19□□□□□ -1.26
VPS13C-207ENST00000558919 PHLDB3Q6NSJ2 640 aa7.19□□□□□ -1.26
VPS13C-207ENST00000558919 SYT9Q86SS6 491 aa7.19□□□□□ -1.26
VPS13C-207ENST00000558919 TREML1Q86YW5 311 aa7.19□□□□□ -1.26
VPS13C-207ENST00000558919 STIM2Q9P246 746 aa7.19□□□□□ -1.26
VPS13C-207ENST00000558919 SEPT3Q9UH03 358 aa7.19□□□□□ -1.26
VPS13C-207ENST00000558919 MTMR7Q9Y216 660 aa7.19□□□□□ -1.26
VPS13C-207ENST00000558919 OPLAHO14841 1288 aa7.18□□□□□ -1.26
VPS13C-207ENST00000558919 EPXP11678 715 aa7.18□□□□□ -1.26
VPS13C-207ENST00000558919 PCBP4P57723 403 aaKnown RBP7.18□□□□□ -1.26
VPS13C-207ENST00000558919 ETFBKMTQ8IXQ9 262 aa7.18□□□□□ -1.26
VPS13C-207ENST00000558919 ABTB2Q8N961 1025 aa7.18□□□□□ -1.26
VPS13C-207ENST00000558919 NEDD1Q8NHV4 660 aa7.18□□□□□ -1.26
VPS13C-207ENST00000558919 GSX2Q9BZM3 304 aa7.18□□□□□ -1.26
VPS13C-207ENST00000558919 SHISA8B8ZZ34 492 aa7.17□□□□□ -1.26
VPS13C-207ENST00000558919 GRNP28799 593 aaKnown RBP7.17□□□□□ -1.26
VPS13C-207ENST00000558919 CCINQ13939 588 aa7.17□□□□□ -1.26
VPS13C-207ENST00000558919 FCHSD1Q86WN1 690 aa7.17□□□□□ -1.26
VPS13C-207ENST00000558919 HELQQ8TDG4 1101 aa7.17□□□□□ -1.26
VPS13C-207ENST00000558919 TNFRSF25Q93038 417 aa7.17□□□□□ -1.26
VPS13C-207ENST00000558919 FAM13BQ9NYF5 915 aa7.17□□□□□ -1.26
VPS13C-207ENST00000558919 ADARB2-AS1A8MUL3 147 aa7.16□□□□□ -1.26
VPS13C-207ENST00000558919 SCNN1AP37088 669 aa7.16□□□□□ -1.26
VPS13C-207ENST00000558919 MARSP56192 900 aaKnown RBP7.16□□□□□ -1.26
VPS13C-207ENST00000558919 FAM26DQ5JW98 314 aa7.16□□□□□ -1.26
VPS13C-207ENST00000558919 BHMTQ93088 406 aa7.16□□□□□ -1.26
VPS13C-207ENST00000558919 EGFRP00533 1210 aa7.15□□□□□ -1.26
VPS13C-207ENST00000558919 RAB44Q7Z6P3 723 aaPredicted RBP7.15□□□□□ -1.26
VPS13C-207ENST00000558919 GTF3C2Q8WUA4 911 aaPredicted RBP7.15□□□□□ -1.26
VPS13C-207ENST00000558919 SCARF2Q96GP6 870 aaPredicted RBP7.15□□□□□ -1.26
VPS13C-207ENST00000558919 BTBD6Q96KE9 485 aa7.15□□□□□ -1.26
VPS13C-207ENST00000558919 PNMA5Q96PV4 448 aa7.15□□□□□ -1.26
VPS13C-207ENST00000558919 MDFIQ99750 246 aa7.15□□□□□ -1.26
VPS13C-207ENST00000558919 RTCBQ9Y3I0 505 aaKnown RBP7.15□□□□□ -1.26
VPS13C-207ENST00000558919 ELOA3CA0A087WX78 387 aaPredicted RBP7.14□□□□□ -1.27
VPS13C-207ENST00000558919 ELOA3DA6NLF2 546 aaPredicted RBP7.14□□□□□ -1.27
VPS13C-207ENST00000558919 ALAS2P22557 587 aa7.14□□□□□ -1.27
VPS13C-207ENST00000558919 ZAP70P43403 619 aa7.14□□□□□ -1.27
VPS13C-207ENST00000558919 ELOA3BQ3SY89 546 aa7.14□□□□□ -1.27
VPS13C-207ENST00000558919 RGL4Q8IZJ4 473 aa7.14□□□□□ -1.27
VPS13C-207ENST00000558919 CMTR1Q8N1G2 835 aaKnown RBP7.14□□□□□ -1.27
VPS13C-207ENST00000558919 ELOA3Q8NG57 546 aa7.14□□□□□ -1.27
VPS13C-207ENST00000558919 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.14□□□□□ -1.27
VPS13C-207ENST00000558919 RNF225M0QZC1 329 aaPredicted RBP7.13□□□□□ -1.27
VPS13C-207ENST00000558919 ARID4AP29374 1257 aaPredicted RBP7.13□□□□□ -1.27
VPS13C-207ENST00000558919 CHSY3Q70JA7 882 aa7.13□□□□□ -1.27
VPS13C-207ENST00000558919 PIK3R5Q8WYR1 880 aa7.13□□□□□ -1.27
VPS13C-207ENST00000558919 KCNMB2Q9Y691 235 aa7.13□□□□□ -1.27
VPS13C-207ENST00000558919 ZBTB39O15060 712 aa7.12□□□□□ -1.27
VPS13C-207ENST00000558919 MAP3K6O95382 1288 aa7.12□□□□□ -1.27
VPS13C-207ENST00000558919 NPR3P17342 541 aa7.12□□□□□ -1.27
VPS13C-207ENST00000558919 NFKB1P19838 968 aa7.12□□□□□ -1.27
VPS13C-207ENST00000558919 AMPD1P23109 780 aa7.12□□□□□ -1.27
VPS13C-207ENST00000558919 SF3B2Q13435 895 aaKnown RBP7.12□□□□□ -1.27
VPS13C-207ENST00000558919 PODNQ7Z5L7 613 aa7.12□□□□□ -1.27
VPS13C-207ENST00000558919 BEND7Q8N7W2 519 aaPredicted RBP7.12□□□□□ -1.27
VPS13C-207ENST00000558919 USP20Q9Y2K6 914 aa7.12□□□□□ -1.27
VPS13C-207ENST00000558919 XYLBO75191 536 aa7.11□□□□□ -1.27
VPS13C-207ENST00000558919 ADH7P40394 386 aa7.11□□□□□ -1.27
VPS13C-207ENST00000558919 FKBP4Q02790 459 aaKnown RBP eCLIP7.11□□□□□ -1.27
VPS13C-207ENST00000558919 KCNMA1Q12791 1236 aa7.11□□□□□ -1.27
VPS13C-207ENST00000558919 NOM1Q5C9Z4 860 aaKnown RBP7.11□□□□□ -1.27
VPS13C-207ENST00000558919 ALKBH2Q6NS38 261 aa7.11□□□□□ -1.27
VPS13C-207ENST00000558919 KANK3Q6NY19 840 aa7.11□□□□□ -1.27
VPS13C-207ENST00000558919 EGFL7Q9UHF1 273 aa7.11□□□□□ -1.27
VPS13C-207ENST00000558919 PHF20L1A8MW92 1017 aa7.1□□□□□ -1.27
VPS13C-207ENST00000558919 SASH3O75995 380 aa7.1□□□□□ -1.27
VPS13C-207ENST00000558919 RARAP10276 462 aa7.1□□□□□ -1.27
VPS13C-207ENST00000558919 HOXB4P17483 251 aaPredicted RBP7.1□□□□□ -1.27
VPS13C-207ENST00000558919 MPSTP25325 297 aa7.1□□□□□ -1.27
VPS13C-207ENST00000558919 TARSP26639 723 aaKnown RBP7.1□□□□□ -1.27
VPS13C-207ENST00000558919 PCSK7Q16549 785 aa7.1□□□□□ -1.27
VPS13C-207ENST00000558919 UBE2OQ9C0C9 1292 aaKnown RBP7.1□□□□□ -1.27
VPS13C-207ENST00000558919 RRAGCQ9HB90 399 aa7.1□□□□□ -1.27
VPS13C-207ENST00000558919 ZFATQ9P243 1243 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms