RNA–Protein interactions for RNA: ENST00000558879.5

LRRC28-210, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4 BASIC

Gene LRRC28, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-210ENST00000558879 RNF123Q5XPI4 1314 aa22.16■■□□□ 1.14
LRRC28-210ENST00000558879 HSPA6P17066 643 aa22.16■■□□□ 1.14
LRRC28-210ENST00000558879 CCDC93Q567U6 631 aa22.16■■□□□ 1.14
LRRC28-210ENST00000558879 CEP350Q5VT06 3117 aa22.15■■□□□ 1.14
LRRC28-210ENST00000558879 GLTPD2A6NH11 291 aa22.15■■□□□ 1.14
LRRC28-210ENST00000558879 CALD1Q05682 793 aaKnown RBP22.15■■□□□ 1.14
LRRC28-210ENST00000558879 PPP1R42Q7Z4L9 355 aa22.15■■□□□ 1.14
LRRC28-210ENST00000558879 GNAI1P63096 354 aa22.14■■□□□ 1.13
LRRC28-210ENST00000558879 DUSP27Q5VZP5 1158 aa22.14■■□□□ 1.13
LRRC28-210ENST00000558879 ALDH1B1P30837 517 aa22.13■■□□□ 1.13
LRRC28-210ENST00000558879 HOXA10P31260 410 aaPredicted RBP22.13■■□□□ 1.13
LRRC28-210ENST00000558879 HSP90AB3PQ58FF7 597 aa22.13■■□□□ 1.13
LRRC28-210ENST00000558879 RBM46Q8TBY0 533 aaKnown RBP22.13■■□□□ 1.13
LRRC28-210ENST00000558879 MYH3P11055 1940 aa22.13■■□□□ 1.13
LRRC28-210ENST00000558879 AIMP1Q12904 312 aaKnown RBP22.12■■□□□ 1.13
LRRC28-210ENST00000558879 DBF4Q9UBU7 674 aaPredicted RBP22.12■■□□□ 1.13
LRRC28-210ENST00000558879 COL4A5P29400 1685 aa22.11■■□□□ 1.13
LRRC28-210ENST00000558879 FKBP4Q02790 459 aaKnown RBP eCLIP22.11■■□□□ 1.13
LRRC28-210ENST00000558879 CCDC27Q2M243 656 aa22.11■■□□□ 1.13
LRRC28-210ENST00000558879 OLFM4Q6UX06 510 aa22.11■■□□□ 1.13
LRRC28-210ENST00000558879 C3orf67Q6ZVT6 689 aa22.11■■□□□ 1.13
LRRC28-210ENST00000558879 NLRP10Q86W26 655 aa22.11■■□□□ 1.13
LRRC28-210ENST00000558879 RRAGCQ9HB90 399 aa22.11■■□□□ 1.13
LRRC28-210ENST00000558879 TCIRG1Q13488 830 aa22.1■■□□□ 1.13
LRRC28-210ENST00000558879 SLC10A5Q5PT55 438 aa22.1■■□□□ 1.13
LRRC28-210ENST00000558879 PLBD2Q8NHP8 589 aa22.1■■□□□ 1.13
LRRC28-210ENST00000558879 UTP14AQ9BVJ6 771 aaKnown RBP22.1■■□□□ 1.13
LRRC28-210ENST00000558879 ADAMTSL1Q8N6G6 1762 aa22.1■■□□□ 1.13
LRRC28-210ENST00000558879 ANP32CO43423 234 aa22.09■■□□□ 1.13
LRRC28-210ENST00000558879 RPGRQ92834 1020 aaKnown RBP22.09■■□□□ 1.13
LRRC28-210ENST00000558879 CRAMP1Q96RY5 1269 aa22.09■■□□□ 1.13
LRRC28-210ENST00000558879 HYPKQ9NX55 129 aa22.09■■□□□ 1.13
LRRC28-210ENST00000558879 POTECB2RU33 542 aa22.08■■□□□ 1.13
LRRC28-210ENST00000558879 NCBP3Q53F19 620 aaKnown RBP22.08■■□□□ 1.13
LRRC28-210ENST00000558879 C16orf71Q8IYS4 520 aaPredicted RBP22.08■■□□□ 1.13
LRRC28-210ENST00000558879 RTKN2Q8IZC4 609 aa22.08■■□□□ 1.13
LRRC28-210ENST00000558879 MRS2Q9HD23 443 aa22.08■■□□□ 1.13
LRRC28-210ENST00000558879 LTBP1Q14766 1721 aa22.08■■□□□ 1.12
LRRC28-210ENST00000558879 PSMD1Q99460 953 aa22.07■■□□□ 1.12
LRRC28-210ENST00000558879 COL4A1P02462 1669 aa22.07■■□□□ 1.12
LRRC28-210ENST00000558879 FSTL1Q12841 308 aa22.06■■□□□ 1.12
LRRC28-210ENST00000558879 CC2D2BQ6DHV5 1058 aa22.06■■□□□ 1.12
LRRC28-210ENST00000558879 NLRP3Q96P20 1036 aa22.06■■□□□ 1.12
LRRC28-210ENST00000558879 ISCA1Q9BUE6 129 aa22.06■■□□□ 1.12
LRRC28-210ENST00000558879 DUOX1Q9NRD9 1551 aa22.06■■□□□ 1.12
LRRC28-210ENST00000558879 SH3TC1Q8TE82 1336 aa22.06■■□□□ 1.12
LRRC28-210ENST00000558879 VEGFAP15692 232 aaPredicted RBP22.05■■□□□ 1.12
LRRC28-210ENST00000558879 DPY19L2Q6NUT2 758 aa22.05■■□□□ 1.12
LRRC28-210ENST00000558879 ANKRD13DQ6ZTN6 518 aa22.05■■□□□ 1.12
LRRC28-210ENST00000558879 WWC1Q8IX03 1113 aa22.05■■□□□ 1.12
LRRC28-210ENST00000558879 C8orf58Q8NAV2 365 aa22.05■■□□□ 1.12
LRRC28-210ENST00000558879 RBM17Q96I25 401 aaKnown RBP22.05■■□□□ 1.12
LRRC28-210ENST00000558879 ABCC4O15439 1325 aa22.05■■□□□ 1.12
LRRC28-210ENST00000558879 SLC51AQ86UW1 340 aa22.04■■□□□ 1.12
LRRC28-210ENST00000558879 ZNF277Q9NRM2 450 aaPredicted RBP22.04■■□□□ 1.12
LRRC28-210ENST00000558879 PPEF1O14829 653 aaPredicted RBP22.03■■□□□ 1.12
LRRC28-210ENST00000558879 IARSP41252 1262 aaKnown RBP22.03■■□□□ 1.12
LRRC28-210ENST00000558879 SYNE4Q8N205 404 aa22.03■■□□□ 1.12
LRRC28-210ENST00000558879 SPEF2Q9C093 1822 aa22.03■■□□□ 1.12
LRRC28-210ENST00000558879 IL16Q14005 1332 aa22.03■■□□□ 1.12
LRRC28-210ENST00000558879 APLP1P51693 650 aa22.02■■□□□ 1.12
LRRC28-210ENST00000558879 GRIPAP1Q4V328 841 aa22.02■■□□□ 1.12
LRRC28-210ENST00000558879 PHAXQ9H814 394 aaKnown RBP22.02■■□□□ 1.12
LRRC28-210ENST00000558879 TRMT112Q9UI30 125 aaKnown RBP22.02■■□□□ 1.12
LRRC28-210ENST00000558879 ZNF541Q9H0D2 1346 aa22.02■■□□□ 1.12
LRRC28-210ENST00000558879 ELL2O00472 640 aaPredicted RBP22.01■■□□□ 1.11
LRRC28-210ENST00000558879 DDNO94850 711 aaPredicted RBP22.01■■□□□ 1.11
LRRC28-210ENST00000558879 TSPYL6Q8N831 410 aa22.01■■□□□ 1.11
LRRC28-210ENST00000558879 SMC1BQ8NDV3 1235 aa22.01■■□□□ 1.11
LRRC28-210ENST00000558879 TSR2Q969E8 191 aaKnown RBP22.01■■□□□ 1.11
LRRC28-210ENST00000558879 L3MBTL3Q96JM7 780 aaPredicted RBP22.01■■□□□ 1.11
LRRC28-210ENST00000558879 HCLS1P14317 486 aaPredicted RBP22■■□□□ 1.11
LRRC28-210ENST00000558879 TRIM28Q13263 835 aaKnown RBP22■■□□□ 1.11
LRRC28-210ENST00000558879 FZD9O00144 591 aa21.99■■□□□ 1.11
LRRC28-210ENST00000558879 GOLGA2Q08379 1002 aa21.99■■□□□ 1.11
LRRC28-210ENST00000558879 ATP5J2-PTCD1G3V325 749 aa21.98■■□□□ 1.11
LRRC28-210ENST00000558879 CCDC30Q5VVM6 783 aa21.98■■□□□ 1.11
LRRC28-210ENST00000558879 ATP6V0A2Q9Y487 856 aa21.98■■□□□ 1.11
LRRC28-210ENST00000558879 PSME4Q14997 1843 aa21.98■■□□□ 1.11
LRRC28-210ENST00000558879 CHMP4AQ9BY43 222 aa21.97■■□□□ 1.11
LRRC28-210ENST00000558879 GRAPQ13588 217 aa21.96■■□□□ 1.11
LRRC28-210ENST00000558879 RIC3Q7Z5B4 369 aa21.96■■□□□ 1.11
LRRC28-210ENST00000558879 GRAPLQ8TC17 118 aaPredicted RBP21.96■■□□□ 1.11
LRRC28-210ENST00000558879 FAM89AQ96GI7 184 aa21.96■■□□□ 1.11
LRRC28-210ENST00000558879 ZNF428Q96B54 188 aa21.95■■□□□ 1.1
LRRC28-210ENST00000558879 RTFDC1Q9BY42 306 aaPredicted RBP21.95■■□□□ 1.1
LRRC28-210ENST00000558879 FANCIQ9NVI1 1328 aa21.95■■□□□ 1.1
LRRC28-210ENST00000558879 IQCA1LA6NCM1 817 aa21.94■■□□□ 1.1
LRRC28-210ENST00000558879 BBOX1O75936 387 aa21.94■■□□□ 1.1
LRRC28-210ENST00000558879 SF3B3Q15393 1217 aaKnown RBP21.94■■□□□ 1.1
LRRC28-210ENST00000558879 TWISTNBQ3B726 338 aaPredicted RBP21.94■■□□□ 1.1
LRRC28-210ENST00000558879 DDX46Q7L014 1031 aaKnown RBP21.94■■□□□ 1.1
LRRC28-210ENST00000558879 TCERG1O14776 1098 aaKnown RBP21.93■■□□□ 1.1
LRRC28-210ENST00000558879 SP8Q8IXZ3 490 aa21.93■■□□□ 1.1
LRRC28-210ENST00000558879 DNAJC5GQ8N7S2 189 aa21.93■■□□□ 1.1
LRRC28-210ENST00000558879 TRPM7Q96QT4 1865 aa21.92■■□□□ 1.1
LRRC28-210ENST00000558879 A0A1B0GUL6 1792 aa21.92■■□□□ 1.1
LRRC28-210ENST00000558879 DDX58O95786 925 aaKnown RBP21.92■■□□□ 1.1
LRRC28-210ENST00000558879 POTEIP0CG38 1075 aa21.92■■□□□ 1.1
LRRC28-210ENST00000558879 POTEJP0CG39 1038 aa21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms