RNA–Protein interactions for RNA: ENST00000558815.5

RPL28-207, Transcript of ribosomal protein L28, humanhuman

TSL 2 BASIC

Gene RPL28, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-207ENST00000558815 TCERG1O14776 1098 aaKnown RBP19.76■□□□□ 0.75
RPL28-207ENST00000558815 PRELPP51888 382 aa19.76■□□□□ 0.75
RPL28-207ENST00000558815 C1QTNF8P60827 252 aa19.76■□□□□ 0.75
RPL28-207ENST00000558815 ANKRD13DQ6ZTN6 518 aa19.76■□□□□ 0.75
RPL28-207ENST00000558815 NLRP10Q86W26 655 aa19.76■□□□□ 0.75
RPL28-207ENST00000558815 PLBD2Q8NHP8 589 aa19.76■□□□□ 0.75
RPL28-207ENST00000558815 PHAXQ9H814 394 aaKnown RBP19.76■□□□□ 0.75
RPL28-207ENST00000558815 ATP5J2-PTCD1G3V325 749 aa19.75■□□□□ 0.75
RPL28-207ENST00000558815 RIC3Q7Z5B4 369 aa19.75■□□□□ 0.75
RPL28-207ENST00000558815 LAMB2P55268 1798 aa19.75■□□□□ 0.75
RPL28-207ENST00000558815 ALDH1B1P30837 517 aa19.74■□□□□ 0.75
RPL28-207ENST00000558815 GOLGA2Q08379 1002 aa19.74■□□□□ 0.75
RPL28-207ENST00000558815 CCDC93Q567U6 631 aa19.74■□□□□ 0.75
RPL28-207ENST00000558815 SOGA3Q5TF21 947 aa19.74■□□□□ 0.75
RPL28-207ENST00000558815 CCDC30Q5VVM6 783 aa19.74■□□□□ 0.75
RPL28-207ENST00000558815 OLFM4Q6UX06 510 aa19.74■□□□□ 0.75
RPL28-207ENST00000558815 C3orf67Q6ZVT6 689 aa19.74■□□□□ 0.75
RPL28-207ENST00000558815 TAOK3Q9H2K8 898 aa19.74■□□□□ 0.75
RPL28-207ENST00000558815 TRMT112Q9UI30 125 aaKnown RBP19.74■□□□□ 0.75
RPL28-207ENST00000558815 RIC1Q4ADV7 1423 aa19.74■□□□□ 0.75
RPL28-207ENST00000558815 IL16Q14005 1332 aa19.74■□□□□ 0.75
RPL28-207ENST00000558815 TWISTNBQ3B726 338 aaPredicted RBP19.73■□□□□ 0.75
RPL28-207ENST00000558815 CRY2Q49AN0 593 aa19.73■□□□□ 0.75
RPL28-207ENST00000558815 SYNE4Q8N205 404 aa19.73■□□□□ 0.75
RPL28-207ENST00000558815 NLRP3Q96P20 1036 aa19.73■□□□□ 0.75
RPL28-207ENST00000558815 NMRK2Q9NPI5 230 aa19.73■□□□□ 0.75
RPL28-207ENST00000558815 FANCIQ9NVI1 1328 aa19.73■□□□□ 0.75
RPL28-207ENST00000558815 DICER1Q9UPY3 1922 aaKnown RBP19.72■□□□□ 0.75
RPL28-207ENST00000558815 HCLS1P14317 486 aaPredicted RBP19.72■□□□□ 0.75
RPL28-207ENST00000558815 NCBP3Q53F19 620 aaKnown RBP19.72■□□□□ 0.75
RPL28-207ENST00000558815 WDR63Q8IWG1 891 aa19.72■□□□□ 0.75
RPL28-207ENST00000558815 RBM17Q96I25 401 aaKnown RBP19.71■□□□□ 0.75
RPL28-207ENST00000558815 STK31Q9BXU1 1019 aa19.71■□□□□ 0.75
RPL28-207ENST00000558815 KDM2BQ8NHM5 1336 aa19.71■□□□□ 0.75
RPL28-207ENST00000558815 SH3TC1Q8TE82 1336 aa19.71■□□□□ 0.75
RPL28-207ENST00000558815 KIF3CO14782 793 aa19.7■□□□□ 0.74
RPL28-207ENST00000558815 RTL5Q5HYW3 569 aaPredicted RBP19.7■□□□□ 0.74
RPL28-207ENST00000558815 C7orf43Q8WVR3 580 aa19.7■□□□□ 0.74
RPL28-207ENST00000558815 MYD88Q99836 296 aa19.7■□□□□ 0.74
RPL28-207ENST00000558815 ISCA1Q9BUE6 129 aa19.7■□□□□ 0.74
RPL28-207ENST00000558815 CHMP4AQ9BY43 222 aa19.7■□□□□ 0.74
RPL28-207ENST00000558815 DDX60Q8IY21 1712 aaKnown RBP19.7■□□□□ 0.74
RPL28-207ENST00000558815 RNF123Q5XPI4 1314 aa19.7■□□□□ 0.74
RPL28-207ENST00000558815 SLC10A5Q5PT55 438 aa19.69■□□□□ 0.74
RPL28-207ENST00000558815 LTBP3Q9NS15 1303 aa19.69■□□□□ 0.74
RPL28-207ENST00000558815 PPEF1O14829 653 aaPredicted RBP19.68■□□□□ 0.74
RPL28-207ENST00000558815 DDX58O95786 925 aaKnown RBP19.68■□□□□ 0.74
RPL28-207ENST00000558815 HOXA10P31260 410 aaPredicted RBP19.68■□□□□ 0.74
RPL28-207ENST00000558815 FAM89AQ96GI7 184 aa19.68■□□□□ 0.74
RPL28-207ENST00000558815 ZC3H4Q9UPT8 1303 aaKnown RBP19.68■□□□□ 0.74
RPL28-207ENST00000558815 FKBP4Q02790 459 aaKnown RBP eCLIP19.67■□□□□ 0.74
RPL28-207ENST00000558815 EXOSC9Q06265 439 aaKnown RBP19.67■□□□□ 0.74
RPL28-207ENST00000558815 SLC51AQ86UW1 340 aa19.67■□□□□ 0.74
RPL28-207ENST00000558815 RRAGCQ9HB90 399 aa19.67■□□□□ 0.74
RPL28-207ENST00000558815 SPINK5Q9NQ38 1064 aaPredicted RBP19.67■□□□□ 0.74
RPL28-207ENST00000558815 TAF1P21675 1872 aa19.67■□□□□ 0.74
RPL28-207ENST00000558815 RTKN2Q8IZC4 609 aa19.66■□□□□ 0.74
RPL28-207ENST00000558815 CRAMP1Q96RY5 1269 aa19.66■□□□□ 0.74
RPL28-207ENST00000558815 ZNF277Q9NRM2 450 aaPredicted RBP19.66■□□□□ 0.74
RPL28-207ENST00000558815 MAP3K2Q9Y2U5 619 aa19.66■□□□□ 0.74
RPL28-207ENST00000558815 SLC4A2P04920 1241 aa19.65■□□□□ 0.74
RPL28-207ENST00000558815 G2E3Q7L622 706 aa19.65■□□□□ 0.74
RPL28-207ENST00000558815 C16orf71Q8IYS4 520 aaPredicted RBP19.65■□□□□ 0.74
RPL28-207ENST00000558815 ABCC4O15439 1325 aa19.65■□□□□ 0.74
RPL28-207ENST00000558815 GLTPD2A6NH11 291 aa19.64■□□□□ 0.73
RPL28-207ENST00000558815 DDX46Q7L014 1031 aaKnown RBP19.64■□□□□ 0.73
RPL28-207ENST00000558815 MYH16Q9H6N6 1097 aa19.64■□□□□ 0.73
RPL28-207ENST00000558815 PI4KAP2A4QPH2 592 aa19.63■□□□□ 0.73
RPL28-207ENST00000558815 PI4KAP1Q8N8J0 262 aa19.63■□□□□ 0.73
RPL28-207ENST00000558815 JARID2Q92833 1246 aaPredicted RBP19.63■□□□□ 0.73
RPL28-207ENST00000558815 METTL22Q9BUU2 404 aaPredicted RBP19.63■□□□□ 0.73
RPL28-207ENST00000558815 TMX4Q9H1E5 349 aaPredicted RBP19.63■□□□□ 0.73
RPL28-207ENST00000558815 IRS4O14654 1257 aaPredicted RBP19.62■□□□□ 0.73
RPL28-207ENST00000558815 VAMP4O75379 141 aa19.62■□□□□ 0.73
RPL28-207ENST00000558815 TRIM28Q13263 835 aaKnown RBP19.62■□□□□ 0.73
RPL28-207ENST00000558815 CC2D2BQ6DHV5 1058 aa19.62■□□□□ 0.73
RPL28-207ENST00000558815 DPY19L2Q6NUT2 758 aa19.62■□□□□ 0.73
RPL28-207ENST00000558815 KSR2Q6VAB6 950 aa19.62■□□□□ 0.73
RPL28-207ENST00000558815 CWC25Q9NXE8 425 aaPredicted RBP19.62■□□□□ 0.73
RPL28-207ENST00000558815 TOMM70O94826 608 aa19.61■□□□□ 0.73
RPL28-207ENST00000558815 IARSP41252 1262 aaKnown RBP19.61■□□□□ 0.73
RPL28-207ENST00000558815 SNED1Q8TER0 1413 aa19.6■□□□□ 0.73
RPL28-207ENST00000558815 NEXNQ0ZGT2 675 aa19.6■□□□□ 0.73
RPL28-207ENST00000558815 FLIIQ13045 1269 aa19.6■□□□□ 0.73
RPL28-207ENST00000558815 FKBP5Q13451 457 aaPredicted RBP19.6■□□□□ 0.73
RPL28-207ENST00000558815 GRAPQ13588 217 aa19.6■□□□□ 0.73
RPL28-207ENST00000558815 ZBTB38Q8NAP3 1195 aaPredicted RBP19.6■□□□□ 0.73
RPL28-207ENST00000558815 CCDC191Q8NCU4 936 aa19.6■□□□□ 0.73
RPL28-207ENST00000558815 GRAPLQ8TC17 118 aaPredicted RBP19.6■□□□□ 0.73
RPL28-207ENST00000558815 ATP6V0A2Q9Y487 856 aa19.6■□□□□ 0.73
RPL28-207ENST00000558815 CACNA1FO60840 1977 aa19.6■□□□□ 0.73
RPL28-207ENST00000558815 CCER2I3L3R5 266 aa19.59■□□□□ 0.73
RPL28-207ENST00000558815 PSMD1Q99460 953 aa19.59■□□□□ 0.73
RPL28-207ENST00000558815 BBOX1O75936 387 aa19.58■□□□□ 0.72
RPL28-207ENST00000558815 DDNO94850 711 aaPredicted RBP19.58■□□□□ 0.72
RPL28-207ENST00000558815 VEGFAP15692 232 aaPredicted RBP19.58■□□□□ 0.72
RPL28-207ENST00000558815 CWF19L2Q2TBE0 894 aaKnown RBP19.58■□□□□ 0.72
RPL28-207ENST00000558815 WDR90Q96KV7 1748 aa19.58■□□□□ 0.72
RPL28-207ENST00000558815 ZNF521Q96K83 1311 aa19.57■□□□□ 0.72
RPL28-207ENST00000558815 ZNF541Q9H0D2 1346 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms