RNA–Protein interactions for RNA: ENST00000558790.5

SPG11-212, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 858 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-212ENST00000558790 FLAD1Q8NFF5 587 aa13.43□□□□□ -0.26
SPG11-212ENST00000558790 CARD14Q9BXL6 1004 aa13.43□□□□□ -0.26
SPG11-212ENST00000558790 KDM4CQ9H3R0 1056 aa13.43□□□□□ -0.26
SPG11-212ENST00000558790 RABGEF1Q9UJ41 708 aa13.43□□□□□ -0.26
SPG11-212ENST00000558790 PIGBQ92521 554 aa13.42□□□□□ -0.26
SPG11-212ENST00000558790 SMARCC1Q92922 1105 aaPredicted RBP13.42□□□□□ -0.26
SPG11-212ENST00000558790 ARFGEF1Q9Y6D6 1849 aa13.41□□□□□ -0.26
SPG11-212ENST00000558790 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.41□□□□□ -0.26
SPG11-212ENST00000558790 RCCD1A6NED2 376 aa13.41□□□□□ -0.26
SPG11-212ENST00000558790 POTEMA6NI47 508 aa13.41□□□□□ -0.26
SPG11-212ENST00000558790 ANKRD13DQ6ZTN6 518 aa13.41□□□□□ -0.26
SPG11-212ENST00000558790 LINC00116Q8NCU8 138 aa13.41□□□□□ -0.26
SPG11-212ENST00000558790 PPM1GO15355 546 aaPredicted RBP13.4□□□□□ -0.26
SPG11-212ENST00000558790 CDCA8Q53HL2 280 aa13.4□□□□□ -0.26
SPG11-212ENST00000558790 ADGRD1Q6QNK2 874 aa13.4□□□□□ -0.26
SPG11-212ENST00000558790 GIGYF2Q6Y7W6 1299 aaKnown RBP13.4□□□□□ -0.26
SPG11-212ENST00000558790 LOC102724428A0A0B4J2F2 783 aa13.39□□□□□ -0.27
SPG11-212ENST00000558790 HMGB2P26583 209 aaKnown RBP13.39□□□□□ -0.27
SPG11-212ENST00000558790 SSFA2P28290 1259 aa13.39□□□□□ -0.27
SPG11-212ENST00000558790 SIK1P57059 783 aa13.39□□□□□ -0.27
SPG11-212ENST00000558790 KRTAP3-3Q9BYR6 98 aa13.39□□□□□ -0.27
SPG11-212ENST00000558790 KRTAP3-2Q9BYR7 98 aa13.39□□□□□ -0.27
SPG11-212ENST00000558790 KDRP35968 1356 aa13.39□□□□□ -0.27
SPG11-212ENST00000558790 PXDNLA1KZ92 1463 aa13.39□□□□□ -0.27
SPG11-212ENST00000558790 TJP1Q07157 1748 aa13.39□□□□□ -0.27
SPG11-212ENST00000558790 SCN11AQ9UI33 1791 aa13.38□□□□□ -0.27
SPG11-212ENST00000558790 ITPK1Q13572 414 aa13.38□□□□□ -0.27
SPG11-212ENST00000558790 TMOD3Q9NYL9 352 aa13.38□□□□□ -0.27
SPG11-212ENST00000558790 SPG7Q9UQ90 795 aa13.38□□□□□ -0.27
SPG11-212ENST00000558790 KCPQ6ZWJ8 1503 aa13.38□□□□□ -0.27
SPG11-212ENST00000558790 WASHC2AQ641Q2 1341 aa13.38□□□□□ -0.27
SPG11-212ENST00000558790 TK2O00142 265 aa13.37□□□□□ -0.27
SPG11-212ENST00000558790 CLCN1P35523 988 aa13.37□□□□□ -0.27
SPG11-212ENST00000558790 TMUB1Q9BVT8 246 aa13.37□□□□□ -0.27
SPG11-212ENST00000558790 GPCPD1Q9NPB8 672 aa13.37□□□□□ -0.27
SPG11-212ENST00000558790 ASAP1Q9ULH1 1129 aa13.37□□□□□ -0.27
SPG11-212ENST00000558790 PHKG2P15735 406 aa13.36□□□□□ -0.27
SPG11-212ENST00000558790 DNAJB2P25686 324 aa13.36□□□□□ -0.27
SPG11-212ENST00000558790 FSTL1Q12841 308 aa13.36□□□□□ -0.27
SPG11-212ENST00000558790 TNRC6CQ9HCJ0 1690 aaKnown RBP13.36□□□□□ -0.27
SPG11-212ENST00000558790 C10orf71Q711Q0 1435 aa13.36□□□□□ -0.27
SPG11-212ENST00000558790 SBF1O95248 1867 aa13.36□□□□□ -0.27
SPG11-212ENST00000558790 ADAMTS7Q9UKP4 1686 aa13.34□□□□□ -0.27
SPG11-212ENST00000558790 PLEKHG2Q9H7P9 1386 aa13.34□□□□□ -0.27
SPG11-212ENST00000558790 KDM6AO15550 1401 aaPredicted RBP13.34□□□□□ -0.27
SPG11-212ENST00000558790 BHMG1C9JSJ3 638 aaPredicted RBP13.34□□□□□ -0.27
SPG11-212ENST00000558790 MS4A1P11836 297 aa13.34□□□□□ -0.27
SPG11-212ENST00000558790 ATP6V1AP38606 617 aa13.34□□□□□ -0.27
SPG11-212ENST00000558790 C16orf71Q8IYS4 520 aaPredicted RBP13.34□□□□□ -0.27
SPG11-212ENST00000558790 IFNL2Q8IZJ0 200 aa13.34□□□□□ -0.27
SPG11-212ENST00000558790 ATG3Q9NT62 314 aa13.34□□□□□ -0.27
SPG11-212ENST00000558790 POLKQ9UBT6 870 aa13.34□□□□□ -0.27
SPG11-212ENST00000558790 MMP10P09238 476 aa13.33□□□□□ -0.28
SPG11-212ENST00000558790 EIF4A2Q14240 407 aaKnown RBP13.33□□□□□ -0.28
SPG11-212ENST00000558790 CDAN1Q8IWY9 1227 aa13.33□□□□□ -0.28
SPG11-212ENST00000558790 FAM117AQ9C073 453 aa13.33□□□□□ -0.28
SPG11-212ENST00000558790 NBPF3Q9H094 633 aa13.33□□□□□ -0.28
SPG11-212ENST00000558790 TMEM134Q9H6X4 195 aa13.33□□□□□ -0.28
SPG11-212ENST00000558790 RRAGCQ9HB90 399 aa13.33□□□□□ -0.28
SPG11-212ENST00000558790 AFDNP55196 1824 aaKnown RBP13.32□□□□□ -0.28
SPG11-212ENST00000558790 HRO43593 1189 aa13.32□□□□□ -0.28
SPG11-212ENST00000558790 DLEC1Q9Y238 1755 aa13.32□□□□□ -0.28
SPG11-212ENST00000558790 TNNT2P45379 298 aaPredicted RBP13.31□□□□□ -0.28
SPG11-212ENST00000558790 IL27Q8NEV9 243 aa13.31□□□□□ -0.28
SPG11-212ENST00000558790 SLC4A9Q96Q91 983 aa13.31□□□□□ -0.28
SPG11-212ENST00000558790 FAM217BQ9NTX9 383 aaPredicted RBP13.31□□□□□ -0.28
SPG11-212ENST00000558790 FOXN1O15353 648 aa13.3□□□□□ -0.28
SPG11-212ENST00000558790 SSTR3P32745 418 aaPredicted RBP13.3□□□□□ -0.28
SPG11-212ENST00000558790 C9orf131Q5VYM1 1079 aa13.3□□□□□ -0.28
SPG11-212ENST00000558790 ARHGAP27Q6ZUM4 889 aa13.3□□□□□ -0.28
SPG11-212ENST00000558790 MRPL50Q8N5N7 158 aaKnown RBP13.3□□□□□ -0.28
SPG11-212ENST00000558790 BCS1LQ9Y276 419 aa13.3□□□□□ -0.28
SPG11-212ENST00000558790 CCDC88AQ3V6T2 1871 aa13.29□□□□□ -0.28
SPG11-212ENST00000558790 SWT1Q5T5J6 900 aaKnown RBP13.29□□□□□ -0.28
SPG11-212ENST00000558790 DAXXQ9UER7 740 aaPredicted RBP13.29□□□□□ -0.28
SPG11-212ENST00000558790 RTCBQ9Y3I0 505 aaKnown RBP13.29□□□□□ -0.28
SPG11-212ENST00000558790 CNTNAP4Q9C0A0 1308 aa13.29□□□□□ -0.28
SPG11-212ENST00000558790 POLR3GLQ9BT43 218 aa13.28□□□□□ -0.28
SPG11-212ENST00000558790 TIAM2Q8IVF5 1701 aa13.27□□□□□ -0.28
SPG11-212ENST00000558790 UBR2Q8IWV8 1755 aa13.27□□□□□ -0.28
SPG11-212ENST00000558790 A0A0G2JLW4 131 aa13.27□□□□□ -0.29
SPG11-212ENST00000558790 ERVV-2B6SEH9 535 aa13.27□□□□□ -0.29
SPG11-212ENST00000558790 GYS1P13807 737 aa13.27□□□□□ -0.29
SPG11-212ENST00000558790 TRAPPC3LQ5T215 181 aa13.27□□□□□ -0.29
SPG11-212ENST00000558790 SAMD7Q7Z3H4 446 aa13.27□□□□□ -0.29
SPG11-212ENST00000558790 LAPTM4BQ86VI4 370 aa13.27□□□□□ -0.29
SPG11-212ENST00000558790 DCAF5Q96JK2 942 aa13.27□□□□□ -0.29
SPG11-212ENST00000558790 DDX11L8A8MPP1 907 aa13.26□□□□□ -0.29
SPG11-212ENST00000558790 ZNF530Q6P9A1 599 aaPredicted RBP13.26□□□□□ -0.29
SPG11-212ENST00000558790 ZFRQ96KR1 1074 aaKnown RBP13.26□□□□□ -0.29
SPG11-212ENST00000558790 NRXN2Q9P2S2 1712 aa13.26□□□□□ -0.29
SPG11-212ENST00000558790 MRC1P22897 1456 aa13.25□□□□□ -0.29
SPG11-212ENST00000558790 HSP90AB1P08238 724 aaKnown RBP13.25□□□□□ -0.29
SPG11-212ENST00000558790 DPEP1P16444 411 aa13.25□□□□□ -0.29
SPG11-212ENST00000558790 TGFB2P61812 414 aa13.25□□□□□ -0.29
SPG11-212ENST00000558790 RC3H1Q5TC82 1133 aaKnown RBP13.25□□□□□ -0.29
SPG11-212ENST00000558790 AEBP1Q8IUX7 1158 aa13.25□□□□□ -0.29
SPG11-212ENST00000558790 NLGN1Q8N2Q7 840 aa13.25□□□□□ -0.29
SPG11-212ENST00000558790 SMC1BQ8NDV3 1235 aa13.25□□□□□ -0.29
SPG11-212ENST00000558790 CCDC87Q9NVE4 849 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms