RNA–Protein interactions for RNA: ENST00000558763.1

SMAD3-207, Transcript of SMAD family member 3, humanhuman

TSL 2

Gene SMAD3, Length 1,957 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-207ENST00000558763 CAMKK2Q96RR4 588 aa16.02■□□□□ 0.15
SMAD3-207ENST00000558763 COL15A1P39059 1388 aa16.01■□□□□ 0.15
SMAD3-207ENST00000558763 PDE1AP54750 535 aa16.01■□□□□ 0.15
SMAD3-207ENST00000558763 TBC1D9Q6ZT07 1266 aa16.01■□□□□ 0.15
SMAD3-207ENST00000558763 EIF5P55010 431 aaKnown RBP16■□□□□ 0.15
SMAD3-207ENST00000558763 NEXNQ0ZGT2 675 aa16■□□□□ 0.15
SMAD3-207ENST00000558763 AMIGO3Q86WK7 504 aa16■□□□□ 0.15
SMAD3-207ENST00000558763 ZBTB3Q9H5J0 574 aa16■□□□□ 0.15
SMAD3-207ENST00000558763 BICC1Q9H694 974 aaKnown RBP16■□□□□ 0.15
SMAD3-207ENST00000558763 PHF14O94880 888 aa16■□□□□ 0.15
SMAD3-207ENST00000558763 CASP7P55210 303 aa16■□□□□ 0.15
SMAD3-207ENST00000558763 RC3H1Q5TC82 1133 aaKnown RBP16■□□□□ 0.15
SMAD3-207ENST00000558763 ILDR2Q71H61 639 aa16■□□□□ 0.15
SMAD3-207ENST00000558763 DDRGK1Q96HY6 314 aa16■□□□□ 0.15
SMAD3-207ENST00000558763 RAB11FIP3O75154 756 aa15.99■□□□□ 0.15
SMAD3-207ENST00000558763 MFAP1P55081 439 aaKnown RBP15.99■□□□□ 0.15
SMAD3-207ENST00000558763 EPHA10Q5JZY3 1008 aa15.99■□□□□ 0.15
SMAD3-207ENST00000558763 KIF6Q6ZMV9 814 aa15.99■□□□□ 0.15
SMAD3-207ENST00000558763 ZBTB47Q9UFB7 747 aaPredicted RBP15.99■□□□□ 0.15
SMAD3-207ENST00000558763 TBC1D2BQ9UPU7 963 aa15.99■□□□□ 0.15
SMAD3-207ENST00000558763 SURF6O75683 361 aaKnown RBP15.98■□□□□ 0.15
SMAD3-207ENST00000558763 ZNF827Q17R98 1081 aa15.98■□□□□ 0.15
SMAD3-207ENST00000558763 DZIP3Q86Y13 1208 aaKnown RBP15.98■□□□□ 0.15
SMAD3-207ENST00000558763 CCDC125Q86Z20 511 aa15.98■□□□□ 0.15
SMAD3-207ENST00000558763 RHPN1Q8TCX5 695 aa15.98■□□□□ 0.15
SMAD3-207ENST00000558763 STAP2Q9UGK3 403 aa15.98■□□□□ 0.15
SMAD3-207ENST00000558763 RTCBQ9Y3I0 505 aaKnown RBP15.98■□□□□ 0.15
SMAD3-207ENST00000558763 UBR3Q6ZT12 1888 aa15.98■□□□□ 0.15
SMAD3-207ENST00000558763 RPS6KA4O75676 772 aa15.98■□□□□ 0.15
SMAD3-207ENST00000558763 SDSP20132 328 aa15.98■□□□□ 0.15
SMAD3-207ENST00000558763 BCL11AQ9H165 835 aa15.98■□□□□ 0.15
SMAD3-207ENST00000558763 ATP5J2-PTCD1G3V325 749 aa15.97■□□□□ 0.15
SMAD3-207ENST00000558763 CDC45O75419 566 aa15.97■□□□□ 0.15
SMAD3-207ENST00000558763 MX1P20591 662 aa15.97■□□□□ 0.15
SMAD3-207ENST00000558763 TSHZ3Q63HK5 1081 aa15.97■□□□□ 0.15
SMAD3-207ENST00000558763 UPF1Q92900 1129 aaKnown RBP eCLIP15.97■□□□□ 0.159e-6■■■■□ 19.8
SMAD3-207ENST00000558763 HDAC5Q9UQL6 1122 aa15.97■□□□□ 0.15
SMAD3-207ENST00000558763 C4AP0C0L4 1744 aa15.97■□□□□ 0.15
SMAD3-207ENST00000558763 UPF2Q9HAU5 1272 aaKnown RBP15.96■□□□□ 0.15
SMAD3-207ENST00000558763 IL1RAPL2Q9NP60 686 aa15.96■□□□□ 0.15
SMAD3-207ENST00000558763 PA2G4Q9UQ80 394 aaKnown RBP15.96■□□□□ 0.15
SMAD3-207ENST00000558763 ANKRD36CQ5JPF3 1778 aa15.96■□□□□ 0.15
SMAD3-207ENST00000558763 MAP3K15Q6ZN16 1313 aa15.96■□□□□ 0.15
SMAD3-207ENST00000558763 RABL6Q3YEC7 729 aaPredicted RBP15.96■□□□□ 0.15
SMAD3-207ENST00000558763 KIF1BPQ96EK5 621 aa15.96■□□□□ 0.15
SMAD3-207ENST00000558763 C22orf23Q9BZE7 217 aa15.96■□□□□ 0.15
SMAD3-207ENST00000558763 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.95■□□□□ 0.14
SMAD3-207ENST00000558763 TFCP2L1Q9NZI6 479 aa15.95■□□□□ 0.14
SMAD3-207ENST00000558763 AOX1Q06278 1338 aa15.95■□□□□ 0.14
SMAD3-207ENST00000558763 RBM25P49756 843 aaKnown RBP15.95■□□□□ 0.14
SMAD3-207ENST00000558763 UBE3BQ7Z3V4 1068 aa15.95■□□□□ 0.14
SMAD3-207ENST00000558763 JARID2Q92833 1246 aaPredicted RBP15.95■□□□□ 0.14
SMAD3-207ENST00000558763 AKT1S1Q96B36 256 aa15.95■□□□□ 0.14
SMAD3-207ENST00000558763 ANO8Q9HCE9 1232 aaPredicted RBP15.95■□□□□ 0.14
SMAD3-207ENST00000558763 AK9Q5TCS8 1911 aa15.94■□□□□ 0.14
SMAD3-207ENST00000558763 BCORQ6W2J9 1755 aa15.94■□□□□ 0.14
SMAD3-207ENST00000558763 SCN7AQ01118 1682 aa15.94■□□□□ 0.14
SMAD3-207ENST00000558763 H7C1W4 665 aa15.94■□□□□ 0.14
SMAD3-207ENST00000558763 RFX5P48382 616 aaPredicted RBP15.94■□□□□ 0.14
SMAD3-207ENST00000558763 HLFQ16534 295 aa15.94■□□□□ 0.14
SMAD3-207ENST00000558763 ARHGEF1Q92888 912 aaKnown RBP15.94■□□□□ 0.14
SMAD3-207ENST00000558763 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.94■□□□□ 0.14
SMAD3-207ENST00000558763 NUP98P52948 1817 aa15.93■□□□□ 0.14
SMAD3-207ENST00000558763 USP42Q9H9J4 1324 aaKnown RBP15.93■□□□□ 0.14
SMAD3-207ENST00000558763 A0A087WZG4 1122 aa15.93■□□□□ 0.14
SMAD3-207ENST00000558763 HMGB2P26583 209 aaKnown RBP15.93■□□□□ 0.14
SMAD3-207ENST00000558763 HSP90AB4PQ58FF6 505 aa15.93■□□□□ 0.14
SMAD3-207ENST00000558763 TRAPPC3LQ5T215 181 aa15.93■□□□□ 0.14
SMAD3-207ENST00000558763 ISCA1Q9BUE6 129 aa15.93■□□□□ 0.14
SMAD3-207ENST00000558763 SRP68Q9UHB9 627 aaKnown RBP15.93■□□□□ 0.14
SMAD3-207ENST00000558763 CAMTA2O94983 1202 aa15.93■□□□□ 0.14
SMAD3-207ENST00000558763 SLC4A3P48751 1232 aa15.93■□□□□ 0.14
SMAD3-207ENST00000558763 PI4K2BQ8TCG2 481 aa15.93■□□□□ 0.14
SMAD3-207ENST00000558763 SASH1O94885 1247 aa15.92■□□□□ 0.14
SMAD3-207ENST00000558763 SSFA2P28290 1259 aa15.92■□□□□ 0.14
SMAD3-207ENST00000558763 RFC4P35249 363 aa15.92■□□□□ 0.14
SMAD3-207ENST00000558763 GIGYF2Q6Y7W6 1299 aaKnown RBP15.92■□□□□ 0.14
SMAD3-207ENST00000558763 NUTM1Q86Y26 1132 aa15.92■□□□□ 0.14
SMAD3-207ENST00000558763 USPL1Q5W0Q7 1092 aa15.91■□□□□ 0.14
SMAD3-207ENST00000558763 CCDC191Q8NCU4 936 aa15.91■□□□□ 0.14
SMAD3-207ENST00000558763 CWC25Q9NXE8 425 aaPredicted RBP15.91■□□□□ 0.14
SMAD3-207ENST00000558763 ERVV-1B6SEH8 477 aa15.91■□□□□ 0.14
SMAD3-207ENST00000558763 ZPR1O75312 459 aa15.91■□□□□ 0.14
SMAD3-207ENST00000558763 ADRA2BP18089 450 aa15.91■□□□□ 0.14
SMAD3-207ENST00000558763 GPTP24298 496 aa15.91■□□□□ 0.14
SMAD3-207ENST00000558763 FOXO4P98177 505 aa15.91■□□□□ 0.14
SMAD3-207ENST00000558763 KLHDC4Q8TBB5 520 aa15.91■□□□□ 0.14
SMAD3-207ENST00000558763 KIF2CQ99661 725 aa15.91■□□□□ 0.14
SMAD3-207ENST00000558763 STK32BQ9NY57 414 aa15.91■□□□□ 0.14
SMAD3-207ENST00000558763 NARFQ9UHQ1 456 aa15.91■□□□□ 0.14
SMAD3-207ENST00000558763 TRIM28Q13263 835 aaKnown RBP15.9■□□□□ 0.14
SMAD3-207ENST00000558763 SLC15A2Q16348 729 aa15.9■□□□□ 0.14
SMAD3-207ENST00000558763 COPRSQ9NQ92 184 aa15.9■□□□□ 0.14
SMAD3-207ENST00000558763 PTPN12Q05209 780 aaKnown RBP15.89■□□□□ 0.13
SMAD3-207ENST00000558763 TCIRG1Q13488 830 aa15.89■□□□□ 0.13
SMAD3-207ENST00000558763 PNPLA7Q6ZV29 1317 aa15.89■□□□□ 0.13
SMAD3-207ENST00000558763 ERC1Q8IUD2 1116 aa15.89■□□□□ 0.13
SMAD3-207ENST00000558763 BCL2L12Q9HB09 334 aa15.89■□□□□ 0.13
SMAD3-207ENST00000558763 ZNF652Q9Y2D9 606 aa15.89■□□□□ 0.13
SMAD3-207ENST00000558763 HSP90AB3PQ58FF7 597 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms