RNA–Protein interactions for RNA: ENST00000558609.1

CSHL1-208, Transcript of chorionic somatomammotropin hormone like 1, humanhuman

TSL 3

Gene CSHL1, Length 1,081 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSHL1-208ENST00000558609 ALDH1B1P30837 517 aa20.12■□□□□ 0.81
CSHL1-208ENST00000558609 CCDC27Q2M243 656 aa20.12■□□□□ 0.81
CSHL1-208ENST00000558609 HSP90AB3PQ58FF7 597 aa20.12■□□□□ 0.81
CSHL1-208ENST00000558609 NCBP3Q53F19 620 aaKnown RBP20.11■□□□□ 0.81
CSHL1-208ENST00000558609 TAOK3Q9H2K8 898 aa20.11■□□□□ 0.81
CSHL1-208ENST00000558609 CACNA1SQ13698 1873 aa20.11■□□□□ 0.81
CSHL1-208ENST00000558609 CCDC88AQ3V6T2 1871 aa20.11■□□□□ 0.81
CSHL1-208ENST00000558609 TNRC6CQ9HCJ0 1690 aaKnown RBP20.1■□□□□ 0.81
CSHL1-208ENST00000558609 TCIRG1Q13488 830 aa20.1■□□□□ 0.81
CSHL1-208ENST00000558609 SLC10A5Q5PT55 438 aa20.1■□□□□ 0.81
CSHL1-208ENST00000558609 PLBD2Q8NHP8 589 aa20.1■□□□□ 0.81
CSHL1-208ENST00000558609 KLRG1Q96E93 195 aa20.1■□□□□ 0.81
CSHL1-208ENST00000558609 UTP14AQ9BVJ6 771 aaKnown RBP20.1■□□□□ 0.81
CSHL1-208ENST00000558609 HYPKQ9NX55 129 aa20.1■□□□□ 0.81
CSHL1-208ENST00000558609 RNF123Q5XPI4 1314 aa20.09■□□□□ 0.81
CSHL1-208ENST00000558609 HOXA10P31260 410 aaPredicted RBP20.09■□□□□ 0.81
CSHL1-208ENST00000558609 CCDC93Q567U6 631 aa20.09■□□□□ 0.81
CSHL1-208ENST00000558609 COL13A1Q5TAT6 717 aaPredicted RBP20.09■□□□□ 0.81
CSHL1-208ENST00000558609 WWC1Q8IX03 1113 aa20.09■□□□□ 0.81
CSHL1-208ENST00000558609 JMYQ8N9B5 988 aa20.09■□□□□ 0.81
CSHL1-208ENST00000558609 GLTPD2A6NH11 291 aa20.08■□□□□ 0.81
CSHL1-208ENST00000558609 ANKRD13DQ6ZTN6 518 aa20.08■□□□□ 0.81
CSHL1-208ENST00000558609 NLRP10Q86W26 655 aa20.08■□□□□ 0.81
CSHL1-208ENST00000558609 C8orf58Q8NAV2 365 aa20.08■□□□□ 0.81
CSHL1-208ENST00000558609 FSTL1Q12841 308 aa20.07■□□□□ 0.8
CSHL1-208ENST00000558609 RPGRQ92834 1020 aaKnown RBP20.07■□□□□ 0.8
CSHL1-208ENST00000558609 RRAGCQ9HB90 399 aa20.07■□□□□ 0.8
CSHL1-208ENST00000558609 ANKRD36CQ5JPF3 1778 aa20.07■□□□□ 0.8
CSHL1-208ENST00000558609 DICER1Q9UPY3 1922 aaKnown RBP20.06■□□□□ 0.8
CSHL1-208ENST00000558609 ELL2O00472 640 aaPredicted RBP20.06■□□□□ 0.8
CSHL1-208ENST00000558609 C16orf71Q8IYS4 520 aaPredicted RBP20.06■□□□□ 0.8
CSHL1-208ENST00000558609 RTKN2Q8IZC4 609 aa20.06■□□□□ 0.8
CSHL1-208ENST00000558609 NLRP3Q96P20 1036 aa20.06■□□□□ 0.8
CSHL1-208ENST00000558609 CRAMP1Q96RY5 1269 aa20.06■□□□□ 0.8
CSHL1-208ENST00000558609 CHMP4AQ9BY43 222 aa20.06■□□□□ 0.8
CSHL1-208ENST00000558609 TIAM2Q8IVF5 1701 aa20.05■□□□□ 0.8
CSHL1-208ENST00000558609 PCNTO95613 3336 aa20.05■□□□□ 0.8
CSHL1-208ENST00000558609 FKBP4Q02790 459 aaKnown RBP eCLIP20.05■□□□□ 0.8
CSHL1-208ENST00000558609 C3orf67Q6ZVT6 689 aa20.05■□□□□ 0.8
CSHL1-208ENST00000558609 RBM17Q96I25 401 aaKnown RBP20.05■□□□□ 0.8
CSHL1-208ENST00000558609 IL16Q14005 1332 aa20.04■□□□□ 0.8
CSHL1-208ENST00000558609 CC2D2BQ6DHV5 1058 aa20.04■□□□□ 0.8
CSHL1-208ENST00000558609 DPY19L2Q6NUT2 758 aa20.04■□□□□ 0.8
CSHL1-208ENST00000558609 OLFM4Q6UX06 510 aa20.04■□□□□ 0.8
CSHL1-208ENST00000558609 ISCA1Q9BUE6 129 aa20.04■□□□□ 0.8
CSHL1-208ENST00000558609 TRMT112Q9UI30 125 aaKnown RBP20.04■□□□□ 0.8
CSHL1-208ENST00000558609 WDR90Q96KV7 1748 aa20.03■□□□□ 0.8
CSHL1-208ENST00000558609 SH3TC1Q8TE82 1336 aa20.02■□□□□ 0.8
CSHL1-208ENST00000558609 TRIM28Q13263 835 aaKnown RBP20.02■□□□□ 0.8
CSHL1-208ENST00000558609 CCDC30Q5VVM6 783 aa20.02■□□□□ 0.8
CSHL1-208ENST00000558609 SYNE4Q8N205 404 aa20.02■□□□□ 0.8
CSHL1-208ENST00000558609 TSPYL6Q8N831 410 aa20.02■□□□□ 0.8
CSHL1-208ENST00000558609 TSR2Q969E8 191 aaKnown RBP20.02■□□□□ 0.8
CSHL1-208ENST00000558609 PHAXQ9H814 394 aaKnown RBP20.02■□□□□ 0.8
CSHL1-208ENST00000558609 SNED1Q8TER0 1413 aa20.02■□□□□ 0.79
CSHL1-208ENST00000558609 VEGFAP15692 232 aaPredicted RBP20.01■□□□□ 0.79
CSHL1-208ENST00000558609 GRIPAP1Q4V328 841 aa20.01■□□□□ 0.79
CSHL1-208ENST00000558609 PSMD1Q99460 953 aa20.01■□□□□ 0.79
CSHL1-208ENST00000558609 ATP5J2-PTCD1G3V325 749 aa20■□□□□ 0.79
CSHL1-208ENST00000558609 HCLS1P14317 486 aaPredicted RBP20■□□□□ 0.79
CSHL1-208ENST00000558609 GOLGA2Q08379 1002 aa20■□□□□ 0.79
CSHL1-208ENST00000558609 RIC3Q7Z5B4 369 aa20■□□□□ 0.79
CSHL1-208ENST00000558609 ZNF277Q9NRM2 450 aaPredicted RBP20■□□□□ 0.79
CSHL1-208ENST00000558609 PPEF1O14829 653 aaPredicted RBP19.99■□□□□ 0.79
CSHL1-208ENST00000558609 WDR63Q8IWG1 891 aa19.99■□□□□ 0.79
CSHL1-208ENST00000558609 POTECB2RU33 542 aa19.97■□□□□ 0.79
CSHL1-208ENST00000558609 IARSP41252 1262 aaKnown RBP19.97■□□□□ 0.79
CSHL1-208ENST00000558609 TWISTNBQ3B726 338 aaPredicted RBP19.97■□□□□ 0.79
CSHL1-208ENST00000558609 FAM9BQ8IZU0 186 aa19.97■□□□□ 0.79
CSHL1-208ENST00000558609 SMC1BQ8NDV3 1235 aa19.97■□□□□ 0.79
CSHL1-208ENST00000558609 ATP6V0A2Q9Y487 856 aa19.97■□□□□ 0.79
CSHL1-208ENST00000558609 ABCC4O15439 1325 aa19.97■□□□□ 0.79
CSHL1-208ENST00000558609 LAMB2P55268 1798 aa19.96■□□□□ 0.79
CSHL1-208ENST00000558609 CAPN15O75808 1086 aa19.96■□□□□ 0.79
CSHL1-208ENST00000558609 BBOX1O75936 387 aa19.96■□□□□ 0.79
CSHL1-208ENST00000558609 DDX58O95786 925 aaKnown RBP19.96■□□□□ 0.79
CSHL1-208ENST00000558609 FAM89AQ96GI7 184 aa19.96■□□□□ 0.79
CSHL1-208ENST00000558609 SALL2Q9Y467 1007 aaPredicted RBP19.96■□□□□ 0.79
CSHL1-208ENST00000558609 DDNO94850 711 aaPredicted RBP19.95■□□□□ 0.78
CSHL1-208ENST00000558609 DDX46Q7L014 1031 aaKnown RBP19.95■□□□□ 0.78
CSHL1-208ENST00000558609 ZNF428Q96B54 188 aa19.95■□□□□ 0.78
CSHL1-208ENST00000558609 TMX4Q9H1E5 349 aaPredicted RBP19.95■□□□□ 0.78
CSHL1-208ENST00000558609 TCERG1O14776 1098 aaKnown RBP19.94■□□□□ 0.78
CSHL1-208ENST00000558609 SF3B3Q15393 1217 aaKnown RBP19.94■□□□□ 0.78
CSHL1-208ENST00000558609 TNS4Q8IZW8 715 aa19.94■□□□□ 0.78
CSHL1-208ENST00000558609 CCDC191Q8NCU4 936 aa19.94■□□□□ 0.78
CSHL1-208ENST00000558609 MYD88Q99836 296 aa19.94■□□□□ 0.78
CSHL1-208ENST00000558609 METTL22Q9BUU2 404 aaPredicted RBP19.94■□□□□ 0.78
CSHL1-208ENST00000558609 STK31Q9BXU1 1019 aa19.94■□□□□ 0.78
CSHL1-208ENST00000558609 FANCIQ9NVI1 1328 aa19.94■□□□□ 0.78
CSHL1-208ENST00000558609 FZD9O00144 591 aa19.93■□□□□ 0.78
CSHL1-208ENST00000558609 GRAPQ13588 217 aa19.93■□□□□ 0.78
CSHL1-208ENST00000558609 SLC51AQ86UW1 340 aa19.93■□□□□ 0.78
CSHL1-208ENST00000558609 SP8Q8IXZ3 490 aa19.93■□□□□ 0.78
CSHL1-208ENST00000558609 ZBTB38Q8NAP3 1195 aaPredicted RBP19.93■□□□□ 0.78
CSHL1-208ENST00000558609 GRAPLQ8TC17 118 aaPredicted RBP19.93■□□□□ 0.78
CSHL1-208ENST00000558609 DDX60Q8IY21 1712 aaKnown RBP19.93■□□□□ 0.78
CSHL1-208ENST00000558609 IRS4O14654 1257 aaPredicted RBP19.92■□□□□ 0.78
CSHL1-208ENST00000558609 KSR2Q6VAB6 950 aa19.92■□□□□ 0.78
CSHL1-208ENST00000558609 JDP2Q8WYK2 163 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms