RNA–Protein interactions for RNA: ENST00000558471.5

LRRC28-206, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 793 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-206ENST00000558471 UTP14AQ9BVJ6 771 aaKnown RBP15.98■□□□□ 0.15
LRRC28-206ENST00000558471 IBTKQ9P2D0 1353 aaPredicted RBP15.98■□□□□ 0.15
LRRC28-206ENST00000558471 DCAF8L1A6NGE4 600 aa15.97■□□□□ 0.15
LRRC28-206ENST00000558471 H0YIN7 160 aa15.97■□□□□ 0.15
LRRC28-206ENST00000558471 CT47B1P0C2W7 299 aaPredicted RBP15.97■□□□□ 0.15
LRRC28-206ENST00000558471 YBX3P16989 372 aaKnown RBP eCLIP15.97■□□□□ 0.151e-6■■■□□ 17.7
LRRC28-206ENST00000558471 DLEC1Q9Y238 1755 aa15.96■□□□□ 0.15
LRRC28-206ENST00000558471 ALDH1L2Q3SY69 923 aa15.96■□□□□ 0.15
LRRC28-206ENST00000558471 SYNE4Q8N205 404 aa15.96■□□□□ 0.15
LRRC28-206ENST00000558471 BCL2L13Q9BXK5 485 aa15.96■□□□□ 0.15
LRRC28-206ENST00000558471 PIM2Q9P1W9 311 aa15.96■□□□□ 0.15
LRRC28-206ENST00000558471 TRMT112Q9UI30 125 aaKnown RBP15.96■□□□□ 0.15
LRRC28-206ENST00000558471 ABCC12Q96J65 1359 aa15.96■□□□□ 0.15
LRRC28-206ENST00000558471 COL11A2P13942 1736 aaPredicted RBP15.95■□□□□ 0.14
LRRC28-206ENST00000558471 KLRG2A4D1S0 409 aaPredicted RBP15.95■□□□□ 0.14
LRRC28-206ENST00000558471 SLC10A5Q5PT55 438 aa15.95■□□□□ 0.14
LRRC28-206ENST00000558471 DNAAF4Q8WXU2 420 aa15.95■□□□□ 0.14
LRRC28-206ENST00000558471 PDZRN3Q9UPQ7 1066 aa15.95■□□□□ 0.14
LRRC28-206ENST00000558471 F6X3S4 739 aa15.94■□□□□ 0.14
LRRC28-206ENST00000558471 IGKV5-2P06315 115 aa15.94■□□□□ 0.14
LRRC28-206ENST00000558471 SRGNP10124 158 aa15.94■□□□□ 0.14
LRRC28-206ENST00000558471 CCDC191Q8NCU4 936 aa15.94■□□□□ 0.14
LRRC28-206ENST00000558471 BCS1LQ9Y276 419 aa15.94■□□□□ 0.14
LRRC28-206ENST00000558471 TNRC6CQ9HCJ0 1690 aaKnown RBP15.94■□□□□ 0.14
LRRC28-206ENST00000558471 RNF123Q5XPI4 1314 aa15.94■□□□□ 0.14
LRRC28-206ENST00000558471 SH3TC1Q8TE82 1336 aa15.94■□□□□ 0.14
LRRC28-206ENST00000558471 RARSP54136 660 aaKnown RBP15.93■□□□□ 0.14
LRRC28-206ENST00000558471 NEXNQ0ZGT2 675 aa15.93■□□□□ 0.14
LRRC28-206ENST00000558471 CWF19L2Q2TBE0 894 aaKnown RBP15.93■□□□□ 0.14
LRRC28-206ENST00000558471 ZNF622Q969S3 477 aaKnown RBP eCLIP15.93■□□□□ 0.14
LRRC28-206ENST00000558471 FAM89AQ96GI7 184 aa15.93■□□□□ 0.14
LRRC28-206ENST00000558471 SMC4Q9NTJ3 1288 aa15.93■□□□□ 0.14
LRRC28-206ENST00000558471 CWC25Q9NXE8 425 aaPredicted RBP15.93■□□□□ 0.14
LRRC28-206ENST00000558471 ARFGEF1Q9Y6D6 1849 aa15.92■□□□□ 0.14
LRRC28-206ENST00000558471 HCLS1P14317 486 aaPredicted RBP15.92■□□□□ 0.14
LRRC28-206ENST00000558471 DALRD3Q5D0E6 543 aaKnown RBP15.92■□□□□ 0.14
LRRC28-206ENST00000558471 RTL5Q5HYW3 569 aaPredicted RBP15.92■□□□□ 0.14
LRRC28-206ENST00000558471 C3orf67Q6ZVT6 689 aa15.92■□□□□ 0.14
LRRC28-206ENST00000558471 MASTLQ96GX5 879 aa15.92■□□□□ 0.14
LRRC28-206ENST00000558471 CACNA1SQ13698 1873 aa15.92■□□□□ 0.14
LRRC28-206ENST00000558471 LAMB2P55268 1798 aa15.92■□□□□ 0.14
LRRC28-206ENST00000558471 RIC1Q4ADV7 1423 aa15.92■□□□□ 0.14
LRRC28-206ENST00000558471 DDX60Q8IY21 1712 aaKnown RBP15.91■□□□□ 0.14
LRRC28-206ENST00000558471 NEURL1BA8MQ27 555 aa15.91■□□□□ 0.14
LRRC28-206ENST00000558471 CRY2Q49AN0 593 aa15.91■□□□□ 0.14
LRRC28-206ENST00000558471 STYK1Q6J9G0 422 aa15.91■□□□□ 0.14
LRRC28-206ENST00000558471 TTLL6Q8N841 843 aa15.91■□□□□ 0.14
LRRC28-206ENST00000558471 ZBTB38Q8NAP3 1195 aaPredicted RBP15.91■□□□□ 0.14
LRRC28-206ENST00000558471 LINS1Q8NG48 757 aa15.91■□□□□ 0.14
LRRC28-206ENST00000558471 JARID2Q92833 1246 aaPredicted RBP15.91■□□□□ 0.14
LRRC28-206ENST00000558471 NLRP3Q96P20 1036 aa15.91■□□□□ 0.14
LRRC28-206ENST00000558471 SLX4Q8IY92 1834 aa15.9■□□□□ 0.14
LRRC28-206ENST00000558471 GRIN3BO60391 1043 aa15.9■□□□□ 0.14
LRRC28-206ENST00000558471 PCCAP05165 728 aaPredicted RBP15.9■□□□□ 0.14
LRRC28-206ENST00000558471 NPR1P16066 1061 aa15.9■□□□□ 0.14
LRRC28-206ENST00000558471 BEND3Q5T5X7 828 aa15.9■□□□□ 0.14
LRRC28-206ENST00000558471 GOLGB1Q14789 3259 aaKnown RBP15.9■□□□□ 0.14
LRRC28-206ENST00000558471 PTPRCP08575 1304 aa15.9■□□□□ 0.14
LRRC28-206ENST00000558471 BRPF1P55201 1214 aaPredicted RBP15.89■□□□□ 0.13
LRRC28-206ENST00000558471 GCKRQ14397 625 aa15.89■□□□□ 0.13
LRRC28-206ENST00000558471 SLC4A10Q6U841 1118 aa15.89■□□□□ 0.13
LRRC28-206ENST00000558471 CNKSR1Q969H4 720 aa15.89■□□□□ 0.13
LRRC28-206ENST00000558471 NOB1Q9ULX3 412 aaKnown RBP15.89■□□□□ 0.13
LRRC28-206ENST00000558471 CHD4Q14839 1912 aa15.88■□□□□ 0.13
LRRC28-206ENST00000558471 IRS4O14654 1257 aaPredicted RBP15.88■□□□□ 0.13
LRRC28-206ENST00000558471 TAF1P21675 1872 aa15.87■□□□□ 0.13
LRRC28-206ENST00000558471 H7C1W4 665 aa15.87■□□□□ 0.13
LRRC28-206ENST00000558471 BCAR3O75815 825 aa15.87■□□□□ 0.13
LRRC28-206ENST00000558471 HOXA10P31260 410 aaPredicted RBP15.87■□□□□ 0.13
LRRC28-206ENST00000558471 RPGRQ92834 1020 aaKnown RBP15.87■□□□□ 0.13
LRRC28-206ENST00000558471 YTHDC1Q96MU7 727 aaKnown RBP15.87■□□□□ 0.13
LRRC28-206ENST00000558471 ALDH1B1P30837 517 aa15.86■□□□□ 0.13
LRRC28-206ENST00000558471 PRPF40BQ6NWY9 871 aaKnown RBP15.86■□□□□ 0.13
LRRC28-206ENST00000558471 ARHGAP27Q6ZUM4 889 aa15.86■□□□□ 0.13
LRRC28-206ENST00000558471 RBM17Q96I25 401 aaKnown RBP15.86■□□□□ 0.13
LRRC28-206ENST00000558471 ZNF219Q9P2Y4 722 aaPredicted RBP15.86■□□□□ 0.13
LRRC28-206ENST00000558471 CDHR2Q9BYE9 1310 aa15.86■□□□□ 0.13
LRRC28-206ENST00000558471 UTRNP46939 3433 aa15.85■□□□□ 0.13
LRRC28-206ENST00000558471 C21orf2O43822 256 aa15.85■□□□□ 0.13
LRRC28-206ENST00000558471 SF3B3Q15393 1217 aaKnown RBP15.85■□□□□ 0.13
LRRC28-206ENST00000558471 UBE3BQ7Z3V4 1068 aa15.85■□□□□ 0.13
LRRC28-206ENST00000558471 CRAMP1Q96RY5 1269 aa15.85■□□□□ 0.13
LRRC28-206ENST00000558471 SRCIN1Q9C0H9 1055 aa15.85■□□□□ 0.13
LRRC28-206ENST00000558471 MYH3P11055 1940 aa15.84■□□□□ 0.13
LRRC28-206ENST00000558471 PDE8AO60658 829 aa15.84■□□□□ 0.13
LRRC28-206ENST00000558471 ALDH1L1O75891 902 aa15.84■□□□□ 0.13
LRRC28-206ENST00000558471 CASP7P55210 303 aa15.84■□□□□ 0.13
LRRC28-206ENST00000558471 C7orf43Q8WVR3 580 aa15.84■□□□□ 0.13
LRRC28-206ENST00000558471 HSP90B1P14625 803 aaKnown RBP15.83■□□□□ 0.12
LRRC28-206ENST00000558471 ARHGAP45Q92619 1136 aa15.83■□□□□ 0.12
LRRC28-206ENST00000558471 API5Q9BZZ5 524 aaKnown RBP15.83■□□□□ 0.12
LRRC28-206ENST00000558471 KIF16BQ96L93 1317 aa15.83■□□□□ 0.12
LRRC28-206ENST00000558471 OLFM4Q6UX06 510 aa15.82■□□□□ 0.12
LRRC28-206ENST00000558471 DDX46Q7L014 1031 aaKnown RBP15.82■□□□□ 0.12
LRRC28-206ENST00000558471 FRAT1Q92837 279 aaPredicted RBP15.82■□□□□ 0.12
LRRC28-206ENST00000558471 ABCC4O15439 1325 aa15.82■□□□□ 0.12
LRRC28-206ENST00000558471 SBF1O95248 1867 aa15.82■□□□□ 0.12
LRRC28-206ENST00000558471 FER1L6Q2WGJ9 1857 aa15.82■□□□□ 0.12
LRRC28-206ENST00000558471 CCDC88AQ3V6T2 1871 aa15.82■□□□□ 0.12
LRRC28-206ENST00000558471 GRM8O00222 908 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms