RNA–Protein interactions for RNA: ENST00000558380.1

PIF1-203, Transcript of PIF1 5'-to-3' DNA helicase, humanhuman

TSL 3

Gene PIF1, Length 673 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1-203ENST00000558380 HOXA10P31260 410 aaPredicted RBP20.28■□□□□ 0.84
PIF1-203ENST00000558380 CCDC93Q567U6 631 aa20.28■□□□□ 0.84
PIF1-203ENST00000558380 MRS2Q9HD23 443 aa20.28■□□□□ 0.84
PIF1-203ENST00000558380 ZNF219Q9P2Y4 722 aaPredicted RBP20.28■□□□□ 0.84
PIF1-203ENST00000558380 CACNA1SQ13698 1873 aa20.28■□□□□ 0.84
PIF1-203ENST00000558380 CEP350Q5VT06 3117 aa20.27■□□□□ 0.84
PIF1-203ENST00000558380 AIMP1Q12904 312 aaKnown RBP20.27■□□□□ 0.84
PIF1-203ENST00000558380 GLTPD2A6NH11 291 aa20.26■□□□□ 0.83
PIF1-203ENST00000558380 TCIRG1Q13488 830 aa20.26■□□□□ 0.83
PIF1-203ENST00000558380 SLC10A5Q5PT55 438 aa20.26■□□□□ 0.83
PIF1-203ENST00000558380 NLRP10Q86W26 655 aa20.26■□□□□ 0.83
PIF1-203ENST00000558380 PLBD2Q8NHP8 589 aa20.26■□□□□ 0.83
PIF1-203ENST00000558380 UTP14AQ9BVJ6 771 aaKnown RBP20.26■□□□□ 0.83
PIF1-203ENST00000558380 HYPKQ9NX55 129 aa20.26■□□□□ 0.83
PIF1-203ENST00000558380 DICER1Q9UPY3 1922 aaKnown RBP20.25■□□□□ 0.83
PIF1-203ENST00000558380 FKBP4Q02790 459 aaKnown RBP eCLIP20.24■□□□□ 0.83
PIF1-203ENST00000558380 ANKRD13DQ6ZTN6 518 aa20.24■□□□□ 0.83
PIF1-203ENST00000558380 WWC1Q8IX03 1113 aa20.24■□□□□ 0.83
PIF1-203ENST00000558380 RTKN2Q8IZC4 609 aa20.24■□□□□ 0.83
PIF1-203ENST00000558380 CRAMP1Q96RY5 1269 aa20.24■□□□□ 0.83
PIF1-203ENST00000558380 IL16Q14005 1332 aa20.24■□□□□ 0.83
PIF1-203ENST00000558380 HSPA6P17066 643 aa20.23■□□□□ 0.83
PIF1-203ENST00000558380 RBM46Q8TBY0 533 aaKnown RBP20.23■□□□□ 0.83
PIF1-203ENST00000558380 RPGRQ92834 1020 aaKnown RBP20.23■□□□□ 0.83
PIF1-203ENST00000558380 CCDC88AQ3V6T2 1871 aa20.22■□□□□ 0.83
PIF1-203ENST00000558380 WDR90Q96KV7 1748 aa20.22■□□□□ 0.83
PIF1-203ENST00000558380 CC2D2BQ6DHV5 1058 aa20.22■□□□□ 0.83
PIF1-203ENST00000558380 C3orf67Q6ZVT6 689 aa20.22■□□□□ 0.83
PIF1-203ENST00000558380 C8orf58Q8NAV2 365 aa20.22■□□□□ 0.83
PIF1-203ENST00000558380 NLRP3Q96P20 1036 aa20.22■□□□□ 0.83
PIF1-203ENST00000558380 ISCA1Q9BUE6 129 aa20.22■□□□□ 0.83
PIF1-203ENST00000558380 CHMP4AQ9BY43 222 aa20.22■□□□□ 0.83
PIF1-203ENST00000558380 OLFM4Q6UX06 510 aa20.21■□□□□ 0.83
PIF1-203ENST00000558380 RBM17Q96I25 401 aaKnown RBP20.21■□□□□ 0.83
PIF1-203ENST00000558380 PSMD1Q99460 953 aa20.21■□□□□ 0.83
PIF1-203ENST00000558380 RRAGCQ9HB90 399 aa20.21■□□□□ 0.83
PIF1-203ENST00000558380 TRIM28Q13263 835 aaKnown RBP20.2■□□□□ 0.82
PIF1-203ENST00000558380 GRIPAP1Q4V328 841 aa20.2■□□□□ 0.82
PIF1-203ENST00000558380 DPY19L2Q6NUT2 758 aa20.19■□□□□ 0.82
PIF1-203ENST00000558380 TRMT112Q9UI30 125 aaKnown RBP20.19■□□□□ 0.82
PIF1-203ENST00000558380 SH3TC1Q8TE82 1336 aa20.19■□□□□ 0.82
PIF1-203ENST00000558380 ELL2O00472 640 aaPredicted RBP20.18■□□□□ 0.82
PIF1-203ENST00000558380 VEGFAP15692 232 aaPredicted RBP20.18■□□□□ 0.82
PIF1-203ENST00000558380 FSTL1Q12841 308 aa20.18■□□□□ 0.82
PIF1-203ENST00000558380 C16orf71Q8IYS4 520 aaPredicted RBP20.18■□□□□ 0.82
PIF1-203ENST00000558380 LAMB2P55268 1798 aa20.17■□□□□ 0.82
PIF1-203ENST00000558380 POTECB2RU33 542 aa20.17■□□□□ 0.82
PIF1-203ENST00000558380 PPEF1O14829 653 aaPredicted RBP20.17■□□□□ 0.82
PIF1-203ENST00000558380 CCDC30Q5VVM6 783 aa20.17■□□□□ 0.82
PIF1-203ENST00000558380 TSPYL6Q8N831 410 aa20.17■□□□□ 0.82
PIF1-203ENST00000558380 TSR2Q969E8 191 aaKnown RBP20.17■□□□□ 0.82
PIF1-203ENST00000558380 PHAXQ9H814 394 aaKnown RBP20.17■□□□□ 0.82
PIF1-203ENST00000558380 GOLGA2Q08379 1002 aa20.16■□□□□ 0.82
PIF1-203ENST00000558380 SYNE4Q8N205 404 aa20.16■□□□□ 0.82
PIF1-203ENST00000558380 ZNF277Q9NRM2 450 aaPredicted RBP20.16■□□□□ 0.82
PIF1-203ENST00000558380 ABCC4O15439 1325 aa20.16■□□□□ 0.82
PIF1-203ENST00000558380 DDX60Q8IY21 1712 aaKnown RBP20.16■□□□□ 0.82
PIF1-203ENST00000558380 HCLS1P14317 486 aaPredicted RBP20.15■□□□□ 0.82
PIF1-203ENST00000558380 IARSP41252 1262 aaKnown RBP20.15■□□□□ 0.82
PIF1-203ENST00000558380 WDR63Q8IWG1 891 aa20.15■□□□□ 0.82
PIF1-203ENST00000558380 ATP5J2-PTCD1G3V325 749 aa20.14■□□□□ 0.81
PIF1-203ENST00000558380 L3MBTL3Q96JM7 780 aaPredicted RBP20.14■□□□□ 0.81
PIF1-203ENST00000558380 ATP6V0A2Q9Y487 856 aa20.14■□□□□ 0.81
PIF1-203ENST00000558380 RIC3Q7Z5B4 369 aa20.13■□□□□ 0.81
PIF1-203ENST00000558380 SMC1BQ8NDV3 1235 aa20.13■□□□□ 0.81
PIF1-203ENST00000558380 FANCIQ9NVI1 1328 aa20.12■□□□□ 0.81
PIF1-203ENST00000558380 FZD9O00144 591 aa20.12■□□□□ 0.81
PIF1-203ENST00000558380 BBOX1O75936 387 aa20.12■□□□□ 0.81
PIF1-203ENST00000558380 DDNO94850 711 aaPredicted RBP20.12■□□□□ 0.81
PIF1-203ENST00000558380 APLP1P51693 650 aa20.12■□□□□ 0.81
PIF1-203ENST00000558380 TWISTNBQ3B726 338 aaPredicted RBP20.12■□□□□ 0.81
PIF1-203ENST00000558380 COL4A5P29400 1685 aa20.12■□□□□ 0.81
PIF1-203ENST00000558380 DDX58O95786 925 aaKnown RBP20.11■□□□□ 0.81
PIF1-203ENST00000558380 SF3B3Q15393 1217 aaKnown RBP20.11■□□□□ 0.81
PIF1-203ENST00000558380 SLC51AQ86UW1 340 aa20.11■□□□□ 0.81
PIF1-203ENST00000558380 FAM89AQ96GI7 184 aa20.11■□□□□ 0.81
PIF1-203ENST00000558380 ZNF541Q9H0D2 1346 aa20.1■□□□□ 0.81
PIF1-203ENST00000558380 GRAPQ13588 217 aa20.1■□□□□ 0.81
PIF1-203ENST00000558380 DDX46Q7L014 1031 aaKnown RBP20.1■□□□□ 0.81
PIF1-203ENST00000558380 TMC4Q7Z404 712 aa20.1■□□□□ 0.81
PIF1-203ENST00000558380 SP8Q8IXZ3 490 aa20.1■□□□□ 0.81
PIF1-203ENST00000558380 ZBTB38Q8NAP3 1195 aaPredicted RBP20.1■□□□□ 0.81
PIF1-203ENST00000558380 CCDC191Q8NCU4 936 aa20.1■□□□□ 0.81
PIF1-203ENST00000558380 GRAPLQ8TC17 118 aaPredicted RBP20.1■□□□□ 0.81
PIF1-203ENST00000558380 METTL22Q9BUU2 404 aaPredicted RBP20.1■□□□□ 0.81
PIF1-203ENST00000558380 RTFDC1Q9BY42 306 aaPredicted RBP20.1■□□□□ 0.81
PIF1-203ENST00000558380 VPS33BQ9H267 617 aa20.1■□□□□ 0.81
PIF1-203ENST00000558380 LRRC37AA6NMS7 1700 aa20.1■□□□□ 0.81
PIF1-203ENST00000558380 MYD88Q99836 296 aa20.09■□□□□ 0.81
PIF1-203ENST00000558380 STK31Q9BXU1 1019 aa20.09■□□□□ 0.81
PIF1-203ENST00000558380 IQCA1LA6NCM1 817 aa20.08■□□□□ 0.81
PIF1-203ENST00000558380 JDP2Q8WYK2 163 aa20.08■□□□□ 0.81
PIF1-203ENST00000558380 TMX4Q9H1E5 349 aaPredicted RBP20.08■□□□□ 0.81
PIF1-203ENST00000558380 SCN4AP35499 1836 aa20.07■□□□□ 0.8
PIF1-203ENST00000558380 IRS4O14654 1257 aaPredicted RBP20.07■□□□□ 0.8
PIF1-203ENST00000558380 PCCAP05165 728 aaPredicted RBP20.07■□□□□ 0.8
PIF1-203ENST00000558380 KSR2Q6VAB6 950 aa20.07■□□□□ 0.8
PIF1-203ENST00000558380 FAM9BQ8IZU0 186 aa20.07■□□□□ 0.8
PIF1-203ENST00000558380 TCERG1O14776 1098 aaKnown RBP20.06■□□□□ 0.8
PIF1-203ENST00000558380 HSP90B1P14625 803 aaKnown RBP20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms