RNA–Protein interactions for RNA: ENST00000558282.5

CSPG4P12-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

BASIC

Gene CSPG4P12, Length 4,853 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-201ENST00000558282 MAP4K4O95819 1239 aaPredicted RBP13.48□□□□□ -0.25
CSPG4P12-201ENST00000558282 SH2D4BQ5SQS7 431 aa13.48□□□□□ -0.25
CSPG4P12-201ENST00000558282 NAP1L3Q99457 506 aaPredicted RBP13.48□□□□□ -0.25
CSPG4P12-201ENST00000558282 CCDC77Q9BR77 488 aa13.48□□□□□ -0.25
CSPG4P12-201ENST00000558282 RBBP5Q15291 538 aaKnown RBP13.48□□□□□ -0.25
CSPG4P12-201ENST00000558282 BUB1BO60566 1050 aaPredicted RBP13.47□□□□□ -0.25
CSPG4P12-201ENST00000558282 SETDB1Q15047 1291 aa13.47□□□□□ -0.25
CSPG4P12-201ENST00000558282 TSNAXIP1Q2TAA8 658 aa13.47□□□□□ -0.25
CSPG4P12-201ENST00000558282 TFIP11Q9UBB9 837 aaKnown RBP13.47□□□□□ -0.25
CSPG4P12-201ENST00000558282 PHACTR2O75167 634 aa13.47□□□□□ -0.25
CSPG4P12-201ENST00000558282 CCDC172P0C7W6 258 aa13.47□□□□□ -0.25
CSPG4P12-201ENST00000558282 ERBINQ96RT1 1412 aa13.47□□□□□ -0.25
CSPG4P12-201ENST00000558282 SMC6Q96SB8 1091 aa13.47□□□□□ -0.25
CSPG4P12-201ENST00000558282 TRIM7Q9C029 511 aa13.47□□□□□ -0.25
CSPG4P12-201ENST00000558282 MAGI1Q96QZ7 1491 aaPredicted RBP13.47□□□□□ -0.25
CSPG4P12-201ENST00000558282 RPGRIP1LQ68CZ1 1315 aa13.47□□□□□ -0.25
CSPG4P12-201ENST00000558282 KRT86O43790 486 aa13.47□□□□□ -0.25
CSPG4P12-201ENST00000558282 BRD2P25440 801 aaKnown RBP13.47□□□□□ -0.25
CSPG4P12-201ENST00000558282 PCK1P35558 622 aa13.47□□□□□ -0.25
CSPG4P12-201ENST00000558282 KIAA0753Q2KHM9 967 aa13.47□□□□□ -0.25
CSPG4P12-201ENST00000558282 LARP1Q6PKG0 1096 aaKnown RBP13.47□□□□□ -0.25
CSPG4P12-201ENST00000558282 INTS4Q96HW7 963 aaKnown RBP13.47□□□□□ -0.25
CSPG4P12-201ENST00000558282 BCL2L12Q9HB09 334 aa13.47□□□□□ -0.25
CSPG4P12-201ENST00000558282 ATAD2Q6PL18 1390 aa13.47□□□□□ -0.25
CSPG4P12-201ENST00000558282 NOL3O60936 208 aaKnown RBP13.47□□□□□ -0.25
CSPG4P12-201ENST00000558282 MATR3P43243 847 aaKnown RBP eCLIP13.47□□□□□ -0.25
CSPG4P12-201ENST00000558282 PPP1R9BQ96SB3 815 aa13.47□□□□□ -0.25
CSPG4P12-201ENST00000558282 SELENOOQ9BVL4 669 aa13.47□□□□□ -0.25
CSPG4P12-201ENST00000558282 FCHSD2O94868 740 aa13.46□□□□□ -0.25
CSPG4P12-201ENST00000558282 NUTM2DQ5VT03 806 aaPredicted RBP13.46□□□□□ -0.25
CSPG4P12-201ENST00000558282 ZHX3Q9H4I2 956 aa13.46□□□□□ -0.25
CSPG4P12-201ENST00000558282 BIN1O00499 593 aa13.46□□□□□ -0.25
CSPG4P12-201ENST00000558282 IGHDP01880 384 aa13.46□□□□□ -0.25
CSPG4P12-201ENST00000558282 GCKP35557 465 aa13.46□□□□□ -0.25
CSPG4P12-201ENST00000558282 AIMP1Q12904 312 aaKnown RBP13.46□□□□□ -0.25
CSPG4P12-201ENST00000558282 CFAP58Q5T655 872 aa13.46□□□□□ -0.25
CSPG4P12-201ENST00000558282 RBSNQ9H1K0 784 aa13.46□□□□□ -0.25
CSPG4P12-201ENST00000558282 SUDS3Q9H7L9 328 aaPredicted RBP13.46□□□□□ -0.25
CSPG4P12-201ENST00000558282 NPHP3Q7Z494 1330 aa13.46□□□□□ -0.25
CSPG4P12-201ENST00000558282 N4BP3O15049 544 aa13.46□□□□□ -0.25
CSPG4P12-201ENST00000558282 TTC22Q5TAA0 569 aa13.46□□□□□ -0.25
CSPG4P12-201ENST00000558282 HDGFL1Q5TGJ6 251 aa13.46□□□□□ -0.25
CSPG4P12-201ENST00000558282 RASAL2Q9UJF2 1139 aa13.46□□□□□ -0.25
CSPG4P12-201ENST00000558282 TROQ12816 1431 aaPredicted RBP13.46□□□□□ -0.26
CSPG4P12-201ENST00000558282 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.46□□□□□ -0.26
CSPG4P12-201ENST00000558282 KCNG4Q8TDN1 519 aa13.46□□□□□ -0.26
CSPG4P12-201ENST00000558282 UBAC1Q9BSL1 405 aa13.46□□□□□ -0.26
CSPG4P12-201ENST00000558282 SIL1Q9H173 461 aa13.46□□□□□ -0.26
CSPG4P12-201ENST00000558282 SPATS2LQ9NUQ6 558 aaKnown RBP13.46□□□□□ -0.26
CSPG4P12-201ENST00000558282 PRDM2Q13029 1718 aa13.45□□□□□ -0.26
CSPG4P12-201ENST00000558282 GIGYF1O75420 1035 aaPredicted RBP13.45□□□□□ -0.26
CSPG4P12-201ENST00000558282 F13A1P00488 732 aa13.45□□□□□ -0.26
CSPG4P12-201ENST00000558282 GBP1P32455 592 aa13.45□□□□□ -0.26
CSPG4P12-201ENST00000558282 DNAJC25Q9H1X3 360 aa13.45□□□□□ -0.26
CSPG4P12-201ENST00000558282 DACT1Q9NYF0 836 aa13.45□□□□□ -0.26
CSPG4P12-201ENST00000558282 WHAMMP3Q1A5X7 153 aa13.45□□□□□ -0.26
CSPG4P12-201ENST00000558282 GOLGA5Q8TBA6 731 aa13.45□□□□□ -0.26
CSPG4P12-201ENST00000558282 SSH1Q8WYL5 1049 aa13.45□□□□□ -0.26
CSPG4P12-201ENST00000558282 IL1RAPL2Q9NP60 686 aa13.45□□□□□ -0.26
CSPG4P12-201ENST00000558282 CNPY2Q9Y2B0 182 aa13.45□□□□□ -0.26
CSPG4P12-201ENST00000558282 KIAA1107Q9UPP5 1409 aa13.45□□□□□ -0.26
CSPG4P12-201ENST00000558282 AKR1B10O60218 316 aa13.45□□□□□ -0.26
CSPG4P12-201ENST00000558282 MTIF2P46199 727 aaKnown RBP13.45□□□□□ -0.26
CSPG4P12-201ENST00000558282 HMG20BQ9P0W2 317 aa13.45□□□□□ -0.26
CSPG4P12-201ENST00000558282 A0A1W2PRG0 241 aa13.45□□□□□ -0.26
CSPG4P12-201ENST00000558282 NUCB1Q02818 461 aa13.45□□□□□ -0.26
CSPG4P12-201ENST00000558282 OAS2P29728 719 aaKnown RBP13.44□□□□□ -0.26
CSPG4P12-201ENST00000558282 MRPS27Q92552 414 aaKnown RBP13.44□□□□□ -0.26
CSPG4P12-201ENST00000558282 PLVAPQ9BX97 442 aa13.44□□□□□ -0.26
CSPG4P12-201ENST00000558282 AOPEPQ8N6M6 819 aa13.44□□□□□ -0.26
CSPG4P12-201ENST00000558282 MLECQ14165 292 aa13.44□□□□□ -0.26
CSPG4P12-201ENST00000558282 SLC8A1P32418 973 aa13.44□□□□□ -0.26
CSPG4P12-201ENST00000558282 DNA2P51530 1060 aa13.44□□□□□ -0.26
CSPG4P12-201ENST00000558282 ELF2Q15723 593 aa13.44□□□□□ -0.26
CSPG4P12-201ENST00000558282 RNF216Q9NWF9 866 aaPredicted RBP13.44□□□□□ -0.26
CSPG4P12-201ENST00000558282 RMND1Q9NWS8 449 aa13.44□□□□□ -0.26
CSPG4P12-201ENST00000558282 GOLGA6CA6NDK9 693 aa13.43□□□□□ -0.26
CSPG4P12-201ENST00000558282 GOLGA6DP0CG33 693 aa13.43□□□□□ -0.26
CSPG4P12-201ENST00000558282 TMPOP42166 694 aaKnown RBP13.43□□□□□ -0.26
CSPG4P12-201ENST00000558282 CCDC38Q502W7 563 aa13.43□□□□□ -0.26
CSPG4P12-201ENST00000558282 TCHPQ9BT92 498 aa13.43□□□□□ -0.26
CSPG4P12-201ENST00000558282 GOLGA6AQ9NYA3 693 aa13.43□□□□□ -0.26
CSPG4P12-201ENST00000558282 EXOC6BQ9Y2D4 811 aa13.43□□□□□ -0.26
CSPG4P12-201ENST00000558282 PRPHP41219 470 aa13.43□□□□□ -0.26
CSPG4P12-201ENST00000558282 MPHOSPH8Q99549 860 aa13.43□□□□□ -0.26
CSPG4P12-201ENST00000558282 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.43□□□□□ -0.26
CSPG4P12-201ENST00000558282 HOMER2Q9NSB8 354 aa13.43□□□□□ -0.26
CSPG4P12-201ENST00000558282 ARID4AP29374 1257 aaPredicted RBP13.43□□□□□ -0.26
CSPG4P12-201ENST00000558282 FAM177BA6PVY3 158 aa13.42□□□□□ -0.26
CSPG4P12-201ENST00000558282 FYB1O15117 783 aa13.42□□□□□ -0.26
CSPG4P12-201ENST00000558282 SYKP43405 635 aa13.42□□□□□ -0.26
CSPG4P12-201ENST00000558282 STMN2Q93045 179 aa13.42□□□□□ -0.26
CSPG4P12-201ENST00000558282 ALDH3A1P30838 453 aa13.42□□□□□ -0.26
CSPG4P12-201ENST00000558282 KIF5AQ12840 1032 aa13.42□□□□□ -0.26
CSPG4P12-201ENST00000558282 CCDC110Q8TBZ0 833 aa13.42□□□□□ -0.26
CSPG4P12-201ENST00000558282 PPFIA3O75145 1194 aa13.42□□□□□ -0.26
CSPG4P12-201ENST00000558282 MXRA7P84157 204 aa13.42□□□□□ -0.26
CSPG4P12-201ENST00000558282 PPFIA1Q13136 1202 aa13.42□□□□□ -0.26
CSPG4P12-201ENST00000558282 RHOXF2BP0C7M4 288 aa13.42□□□□□ -0.26
CSPG4P12-201ENST00000558282 RHOXF2Q9BQY4 288 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms