RNA–Protein interactions for RNA: ENST00000558117.1

RTF1-204, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-204ENST00000558117 ALDH16A1Q8IZ83 802 aa10.51□□□□□ -0.73
RTF1-204ENST00000558117 ZCCHC2Q9C0B9 1178 aaKnown RBP10.51□□□□□ -0.73
RTF1-204ENST00000558117 PCDHGC4Q9Y5F7 938 aa10.51□□□□□ -0.73
RTF1-204ENST00000558117 OCLNQ16625 522 aa10.5□□□□□ -0.73
RTF1-204ENST00000558117 HIF1AQ16665 826 aa10.5□□□□□ -0.73
RTF1-204ENST00000558117 ZSCAN1Q8NBB4 408 aa10.5□□□□□ -0.73
RTF1-204ENST00000558117 RETREG2Q8NC44 543 aa10.5□□□□□ -0.73
RTF1-204ENST00000558117 CLP1Q92989 425 aaKnown RBP10.5□□□□□ -0.73
RTF1-204ENST00000558117 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.5□□□□□ -0.733e-7■■■■■ 37.3
RTF1-204ENST00000558117 DCDC2BA2VCK2 349 aa10.49□□□□□ -0.73
RTF1-204ENST00000558117 LRRC69Q6ZNQ3 347 aa10.49□□□□□ -0.73
RTF1-204ENST00000558117 ABHD17AQ96GS6 310 aa10.49□□□□□ -0.73
RTF1-204ENST00000558117 ANKIB1Q9P2G1 1089 aa10.49□□□□□ -0.73
RTF1-204ENST00000558117 KHNYNO15037 678 aaKnown RBP10.48□□□□□ -0.73
RTF1-204ENST00000558117 SRSF11Q05519 484 aaKnown RBP10.48□□□□□ -0.73
RTF1-204ENST00000558117 UBAP2LQ14157 1087 aaKnown RBP10.48□□□□□ -0.73
RTF1-204ENST00000558117 BNIP3LO60238 219 aa10.47□□□□□ -0.73
RTF1-204ENST00000558117 FGFR3P22607 806 aa10.47□□□□□ -0.73
RTF1-204ENST00000558117 SAMD5Q5TGI4 173 aa10.47□□□□□ -0.73
RTF1-204ENST00000558117 ADAMTS2O95450 1211 aa10.46□□□□□ -0.73
RTF1-204ENST00000558117 FAM157BP0CG42 384 aa10.46□□□□□ -0.73
RTF1-204ENST00000558117 FKBP5Q13451 457 aaPredicted RBP10.46□□□□□ -0.73
RTF1-204ENST00000558117 RTN1Q16799 776 aa10.46□□□□□ -0.73
RTF1-204ENST00000558117 C7orf43Q8WVR3 580 aa10.46□□□□□ -0.73
RTF1-204ENST00000558117 KLRG1Q96E93 195 aa10.46□□□□□ -0.73
RTF1-204ENST00000558117 IGF1RP08069 1367 aa10.46□□□□□ -0.74
RTF1-204ENST00000558117 ASXL2Q76L83 1435 aa10.46□□□□□ -0.74
RTF1-204ENST00000558117 TEX14Q8IWB6 1497 aa10.46□□□□□ -0.74
RTF1-204ENST00000558117 ADAMTSL3P82987 1691 aa10.46□□□□□ -0.74
RTF1-204ENST00000558117 ABCA5Q8WWZ7 1642 aa10.45□□□□□ -0.74
RTF1-204ENST00000558117 PLB1Q6P1J6 1458 aa10.45□□□□□ -0.74
RTF1-204ENST00000558117 FAM181BA6NEQ2 426 aa10.45□□□□□ -0.74
RTF1-204ENST00000558117 BMP4P12644 408 aa10.45□□□□□ -0.74
RTF1-204ENST00000558117 MAP2K3P46734 347 aa10.45□□□□□ -0.74
RTF1-204ENST00000558117 HSH2DQ96JZ2 352 aa10.45□□□□□ -0.74
RTF1-204ENST00000558117 NDFIP2Q9NV92 336 aa10.45□□□□□ -0.74
RTF1-204ENST00000558117 CXXC1Q9P0U4 656 aaPredicted RBP10.45□□□□□ -0.74
RTF1-204ENST00000558117 ADAMTS12P58397 1594 aa10.44□□□□□ -0.74
RTF1-204ENST00000558117 MAPTP10636 758 aaKnown RBP10.44□□□□□ -0.74
RTF1-204ENST00000558117 ATP2B4P23634 1241 aa10.44□□□□□ -0.74
RTF1-204ENST00000558117 CAPN12Q6ZSI9 719 aa10.44□□□□□ -0.74
RTF1-204ENST00000558117 KIF21BO75037 1637 aa10.44□□□□□ -0.74
RTF1-204ENST00000558117 SLURP2P0DP57 97 aa10.43□□□□□ -0.74
RTF1-204ENST00000558117 SCNN1AP37088 669 aa10.43□□□□□ -0.74
RTF1-204ENST00000558117 TNP2Q05952 138 aa10.43□□□□□ -0.74
RTF1-204ENST00000558117 SVOPQ8N4V2 548 aa10.43□□□□□ -0.74
RTF1-204ENST00000558117 SUSD3Q96L08 255 aa10.43□□□□□ -0.74
RTF1-204ENST00000558117 USTQ9Y2C2 406 aa10.43□□□□□ -0.74
RTF1-204ENST00000558117 CEP63Q96MT8 703 aa10.42□□□□□ -0.74
RTF1-204ENST00000558117 CUX1P39880 1505 aa10.42□□□□□ -0.74
RTF1-204ENST00000558117 FHAD1B1AJZ9 1412 aa10.41□□□□□ -0.74
RTF1-204ENST00000558117 SSFA2P28290 1259 aa10.41□□□□□ -0.74
RTF1-204ENST00000558117 MAP3K10Q02779 954 aa10.41□□□□□ -0.74
RTF1-204ENST00000558117 LAMC2Q13753 1193 aa10.41□□□□□ -0.74
RTF1-204ENST00000558117 MKNK1Q9BUB5 465 aa10.41□□□□□ -0.74
RTF1-204ENST00000558117 MARK1Q9P0L2 795 aa10.41□□□□□ -0.74
RTF1-204ENST00000558117 STK17AQ9UEE5 414 aa10.41□□□□□ -0.74
RTF1-204ENST00000558117 ABCA10Q8WWZ4 1543 aa10.41□□□□□ -0.74
RTF1-204ENST00000558117 MAP3K4Q9Y6R4 1608 aa10.4□□□□□ -0.74
RTF1-204ENST00000558117 CD33P20138 364 aa10.4□□□□□ -0.74
RTF1-204ENST00000558117 PHLDB3Q6NSJ2 640 aa10.4□□□□□ -0.74
RTF1-204ENST00000558117 ZNF280CQ8ND82 737 aa10.4□□□□□ -0.74
RTF1-204ENST00000558117 QTRT2Q9H974 415 aaKnown RBP10.4□□□□□ -0.74
RTF1-204ENST00000558117 EPRSP07814 1512 aaKnown RBP10.39□□□□□ -0.75
RTF1-204ENST00000558117 TGFBR3LH3BV60 316 aa10.39□□□□□ -0.75
RTF1-204ENST00000558117 PTCD1O75127 700 aaKnown RBP10.39□□□□□ -0.75
RTF1-204ENST00000558117 CTBSQ01459 385 aa10.39□□□□□ -0.75
RTF1-204ENST00000558117 DGKZQ13574 1117 aa10.39□□□□□ -0.75
RTF1-204ENST00000558117 MYO19Q96H55 970 aa10.39□□□□□ -0.75
RTF1-204ENST00000558117 BRD7Q9NPI1 651 aa10.39□□□□□ -0.75
RTF1-204ENST00000558117 ABCC2Q92887 1545 aa10.38□□□□□ -0.75
RTF1-204ENST00000558117 EFSO43281 561 aa10.38□□□□□ -0.75
RTF1-204ENST00000558117 FAM182BQ5T319 152 aa10.38□□□□□ -0.75
RTF1-204ENST00000558117 IER5Q5VY09 327 aa10.38□□□□□ -0.75
RTF1-204ENST00000558117 COL26A1Q96A83 441 aa10.38□□□□□ -0.75
RTF1-204ENST00000558117 OXCT2Q9BYC2 517 aaPredicted RBP10.38□□□□□ -0.75
RTF1-204ENST00000558117 KLK14Q9P0G3 267 aa10.38□□□□□ -0.75
RTF1-204ENST00000558117 PRR12Q9ULL5 1215 aa10.38□□□□□ -0.75
RTF1-204ENST00000558117 LORP23490 312 aaPredicted RBP10.37□□□□□ -0.75
RTF1-204ENST00000558117 TYRO3Q06418 890 aa10.37□□□□□ -0.75
RTF1-204ENST00000558117 NAA30Q147X3 362 aaPredicted RBP10.37□□□□□ -0.75
RTF1-204ENST00000558117 C11orf91Q3C1V1 193 aa10.37□□□□□ -0.75
RTF1-204ENST00000558117 ZNF385CQ66K41 422 aaPredicted RBP10.37□□□□□ -0.75
RTF1-204ENST00000558117 BTLAQ7Z6A9 289 aa10.37□□□□□ -0.75
RTF1-204ENST00000558117 SAP130Q9H0E3 1048 aa10.37□□□□□ -0.75
RTF1-204ENST00000558117 C16orf46Q6P387 395 aa10.36□□□□□ -0.75
RTF1-204ENST00000558117 GDF2Q9UK05 429 aaPredicted RBP10.36□□□□□ -0.75
RTF1-204ENST00000558117 LRFN2Q9ULH4 789 aa10.36□□□□□ -0.75
RTF1-204ENST00000558117 KIAA0586Q9BVV6 1533 aa10.36□□□□□ -0.75
RTF1-204ENST00000558117 CELA2BP08218 269 aaPredicted RBP10.35□□□□□ -0.75
RTF1-204ENST00000558117 EPB42P16452 691 aa10.35□□□□□ -0.75
RTF1-204ENST00000558117 COX20Q5RI15 118 aa10.35□□□□□ -0.75
RTF1-204ENST00000558117 LYPD4Q6UWN0 246 aa10.35□□□□□ -0.75
RTF1-204ENST00000558117 GOLGA6L1Q8N7Z2 621 aa10.35□□□□□ -0.75
RTF1-204ENST00000558117 WHAMMQ8TF30 809 aa10.35□□□□□ -0.75
RTF1-204ENST00000558117 ACDQ96AP0 544 aa10.35□□□□□ -0.75
RTF1-204ENST00000558117 STRN4Q9NRL3 753 aa10.35□□□□□ -0.75
RTF1-204ENST00000558117 ENAMQ9NRM1 1142 aa10.35□□□□□ -0.75
RTF1-204ENST00000558117 SEPT3Q9UH03 358 aa10.35□□□□□ -0.75
RTF1-204ENST00000558117 MED1Q15648 1581 aaPredicted RBP10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms