RNA–Protein interactions for RNA: ENST00000558077.1

ALPK3-202, Transcript of alpha kinase 3, humanhuman

TSL 3

Gene ALPK3, Length 487 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3-202ENST00000558077 C7orf43Q8WVR3 580 aa17.55■□□□□ 0.4
ALPK3-202ENST00000558077 CCDC88AQ3V6T2 1871 aa17.54■□□□□ 0.4
ALPK3-202ENST00000558077 TWISTNBQ3B726 338 aaPredicted RBP17.54■□□□□ 0.4
ALPK3-202ENST00000558077 HSP90AB3PQ58FF7 597 aa17.54■□□□□ 0.4
ALPK3-202ENST00000558077 SYNE4Q8N205 404 aa17.54■□□□□ 0.4
ALPK3-202ENST00000558077 NFKBIEO00221 500 aa17.53■□□□□ 0.4
ALPK3-202ENST00000558077 VAMP4O75379 141 aa17.53■□□□□ 0.4
ALPK3-202ENST00000558077 NPR1P16066 1061 aa17.53■□□□□ 0.4
ALPK3-202ENST00000558077 CCDC30Q5VVM6 783 aa17.53■□□□□ 0.4
ALPK3-202ENST00000558077 PRPF40BQ6NWY9 871 aaKnown RBP17.53■□□□□ 0.4
ALPK3-202ENST00000558077 CNKSR1Q969H4 720 aa17.53■□□□□ 0.4
ALPK3-202ENST00000558077 UTP14AQ9BVJ6 771 aaKnown RBP17.53■□□□□ 0.4
ALPK3-202ENST00000558077 TCERG1O14776 1098 aaKnown RBP17.52■□□□□ 0.4
ALPK3-202ENST00000558077 C21orf2O43822 256 aa17.52■□□□□ 0.4
ALPK3-202ENST00000558077 GTF2E1P29083 439 aaPredicted RBP17.52■□□□□ 0.4
ALPK3-202ENST00000558077 RASSF7Q02833 373 aa17.52■□□□□ 0.4
ALPK3-202ENST00000558077 EXOSC9Q06265 439 aaKnown RBP17.52■□□□□ 0.4
ALPK3-202ENST00000558077 C9orf131Q5VYM1 1079 aa17.52■□□□□ 0.4
ALPK3-202ENST00000558077 PPP1R42Q7Z4L9 355 aa17.52■□□□□ 0.4
ALPK3-202ENST00000558077 LAMB2P55268 1798 aa17.52■□□□□ 0.4
ALPK3-202ENST00000558077 CACNA1FO60840 1977 aa17.51■□□□□ 0.39
ALPK3-202ENST00000558077 ATP5J2-PTCD1G3V325 749 aa17.51■□□□□ 0.39
ALPK3-202ENST00000558077 HOXA10P31260 410 aaPredicted RBP17.51■□□□□ 0.39
ALPK3-202ENST00000558077 TRIM28Q13263 835 aaKnown RBP17.51■□□□□ 0.39
ALPK3-202ENST00000558077 G2E3Q7L622 706 aa17.51■□□□□ 0.39
ALPK3-202ENST00000558077 ZNF428Q96B54 188 aa17.5■□□□□ 0.39
ALPK3-202ENST00000558077 ZNF219Q9P2Y4 722 aaPredicted RBP17.5■□□□□ 0.39
ALPK3-202ENST00000558077 RNF123Q5XPI4 1314 aa17.49■□□□□ 0.39
ALPK3-202ENST00000558077 SNED1Q8TER0 1413 aa17.49■□□□□ 0.39
ALPK3-202ENST00000558077 GOLGA2Q08379 1002 aa17.49■□□□□ 0.39
ALPK3-202ENST00000558077 OLFM4Q6UX06 510 aa17.49■□□□□ 0.39
ALPK3-202ENST00000558077 DDX60Q8IY21 1712 aaKnown RBP17.49■□□□□ 0.39
ALPK3-202ENST00000558077 RIC3Q7Z5B4 369 aa17.48■□□□□ 0.39
ALPK3-202ENST00000558077 SLC51AQ86UW1 340 aa17.48■□□□□ 0.39
ALPK3-202ENST00000558077 MIER1Q8N108 512 aa17.48■□□□□ 0.39
ALPK3-202ENST00000558077 CHMP4AQ9BY43 222 aa17.48■□□□□ 0.39
ALPK3-202ENST00000558077 DICER1Q9UPY3 1922 aaKnown RBP17.48■□□□□ 0.39
ALPK3-202ENST00000558077 SLC4A2P04920 1241 aa17.47■□□□□ 0.39
ALPK3-202ENST00000558077 HCLS1P14317 486 aaPredicted RBP17.47■□□□□ 0.39
ALPK3-202ENST00000558077 DIEXFQ68CQ4 756 aaKnown RBP17.47■□□□□ 0.39
ALPK3-202ENST00000558077 CRAMP1Q96RY5 1269 aa17.47■□□□□ 0.39
ALPK3-202ENST00000558077 RNF181Q9P0P0 153 aa17.47■□□□□ 0.39
ALPK3-202ENST00000558077 TRMT112Q9UI30 125 aaKnown RBP17.47■□□□□ 0.39
ALPK3-202ENST00000558077 TAF1P21675 1872 aa17.47■□□□□ 0.39
ALPK3-202ENST00000558077 SH3TC1Q8TE82 1336 aa17.47■□□□□ 0.39
ALPK3-202ENST00000558077 LTBP3Q9NS15 1303 aa17.47■□□□□ 0.39
ALPK3-202ENST00000558077 LMNB1P20700 586 aa17.46■□□□□ 0.39
ALPK3-202ENST00000558077 ALDH1B1P30837 517 aa17.46■□□□□ 0.39
ALPK3-202ENST00000558077 KSR2Q6VAB6 950 aa17.46■□□□□ 0.39
ALPK3-202ENST00000558077 NLRP3Q96P20 1036 aa17.46■□□□□ 0.39
ALPK3-202ENST00000558077 MYD88Q99836 296 aa17.46■□□□□ 0.39
ALPK3-202ENST00000558077 METTL22Q9BUU2 404 aaPredicted RBP17.46■□□□□ 0.39
ALPK3-202ENST00000558077 MYH16Q9H6N6 1097 aa17.46■□□□□ 0.39
ALPK3-202ENST00000558077 PI4KAP2A4QPH2 592 aa17.45■□□□□ 0.38
ALPK3-202ENST00000558077 PI4KAP1Q8N8J0 262 aa17.45■□□□□ 0.38
ALPK3-202ENST00000558077 FAM89AQ96GI7 184 aa17.45■□□□□ 0.38
ALPK3-202ENST00000558077 STK31Q9BXU1 1019 aa17.45■□□□□ 0.38
ALPK3-202ENST00000558077 MAP3K2Q9Y2U5 619 aa17.45■□□□□ 0.38
ALPK3-202ENST00000558077 IGKV5-2P06315 115 aa17.44■□□□□ 0.38
ALPK3-202ENST00000558077 HSPA6P17066 643 aa17.44■□□□□ 0.38
ALPK3-202ENST00000558077 ZNF526Q8TF50 670 aaPredicted RBP17.44■□□□□ 0.38
ALPK3-202ENST00000558077 COL4A1P02462 1669 aa17.43■□□□□ 0.38
ALPK3-202ENST00000558077 SLFN5Q08AF3 891 aa17.43■□□□□ 0.38
ALPK3-202ENST00000558077 CCDC93Q567U6 631 aa17.43■□□□□ 0.38
ALPK3-202ENST00000558077 TRMT2AQ8IZ69 625 aaKnown RBP17.43■□□□□ 0.38
ALPK3-202ENST00000558077 RPGRQ92834 1020 aaKnown RBP17.43■□□□□ 0.38
ALPK3-202ENST00000558077 CDCA7LQ96GN5 454 aa17.43■□□□□ 0.38
ALPK3-202ENST00000558077 RBM17Q96I25 401 aaKnown RBP17.43■□□□□ 0.38
ALPK3-202ENST00000558077 TIAM2Q8IVF5 1701 aa17.42■□□□□ 0.38
ALPK3-202ENST00000558077 KIF3CO14782 793 aa17.42■□□□□ 0.38
ALPK3-202ENST00000558077 DDX58O95786 925 aaKnown RBP17.42■□□□□ 0.38
ALPK3-202ENST00000558077 FLIIQ13045 1269 aa17.42■□□□□ 0.38
ALPK3-202ENST00000558077 SF3B3Q15393 1217 aaKnown RBP17.42■□□□□ 0.38
ALPK3-202ENST00000558077 SOGA3Q5TF21 947 aa17.42■□□□□ 0.38
ALPK3-202ENST00000558077 CCDC191Q8NCU4 936 aa17.42■□□□□ 0.38
ALPK3-202ENST00000558077 TAOK3Q9H2K8 898 aa17.42■□□□□ 0.38
ALPK3-202ENST00000558077 GPBP1L1Q9HC44 474 aaPredicted RBP17.42■□□□□ 0.38
ALPK3-202ENST00000558077 ABCC4O15439 1325 aa17.42■□□□□ 0.38
ALPK3-202ENST00000558077 ZBTB38Q8NAP3 1195 aaPredicted RBP17.41■□□□□ 0.38
ALPK3-202ENST00000558077 ZC3H4Q9UPT8 1303 aaKnown RBP17.41■□□□□ 0.38
ALPK3-202ENST00000558077 IRS4O14654 1257 aaPredicted RBP17.4■□□□□ 0.38
ALPK3-202ENST00000558077 PCCAP05165 728 aaPredicted RBP17.4■□□□□ 0.38
ALPK3-202ENST00000558077 FKBP4Q02790 459 aaKnown RBP eCLIP17.4■□□□□ 0.38
ALPK3-202ENST00000558077 RTL5Q5HYW3 569 aaPredicted RBP17.4■□□□□ 0.38
ALPK3-202ENST00000558077 JARID2Q92833 1246 aaPredicted RBP17.4■□□□□ 0.38
ALPK3-202ENST00000558077 NMRK2Q9NPI5 230 aa17.4■□□□□ 0.38
ALPK3-202ENST00000558077 E9PSI1 815 aa17.39■□□□□ 0.37
ALPK3-202ENST00000558077 CWF19L2Q2TBE0 894 aaKnown RBP17.39■□□□□ 0.37
ALPK3-202ENST00000558077 RTKN2Q8IZC4 609 aa17.39■□□□□ 0.37
ALPK3-202ENST00000558077 CWC25Q9NXE8 425 aaPredicted RBP17.39■□□□□ 0.37
ALPK3-202ENST00000558077 NEURL1BA8MQ27 555 aa17.38■□□□□ 0.37
ALPK3-202ENST00000558077 PPEF1O14829 653 aaPredicted RBP17.38■□□□□ 0.37
ALPK3-202ENST00000558077 CC2D2BQ6DHV5 1058 aa17.38■□□□□ 0.37
ALPK3-202ENST00000558077 PSMD1Q99460 953 aa17.38■□□□□ 0.37
ALPK3-202ENST00000558077 ATP6V0A2Q9Y487 856 aa17.38■□□□□ 0.37
ALPK3-202ENST00000558077 COL4A5P29400 1685 aa17.37■□□□□ 0.37
ALPK3-202ENST00000558077 BBOX1O75936 387 aa17.37■□□□□ 0.37
ALPK3-202ENST00000558077 DNAAF4Q8WXU2 420 aa17.37■□□□□ 0.37
ALPK3-202ENST00000558077 ZNF277Q9NRM2 450 aaPredicted RBP17.37■□□□□ 0.37
ALPK3-202ENST00000558077 GLTPD2A6NH11 291 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms