RNA–Protein interactions for RNA: ENST00000558058.5

PPP1R3E-202, Transcript of protein phosphatase 1 regulatory subunit 3E, humanhuman

TSL 3

Gene PPP1R3E, Length 3,222 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3E-202ENST00000558058 PLBD2Q8NHP8 589 aa13.02□□□□□ -0.33
PPP1R3E-202ENST00000558058 CCNL1Q9UK58 526 aaPredicted RBP13.02□□□□□ -0.33
PPP1R3E-202ENST00000558058 AMIGO3Q86WK7 504 aa13.01□□□□□ -0.33
PPP1R3E-202ENST00000558058 RPAP2Q8IXW5 612 aaPredicted RBP13.01□□□□□ -0.33
PPP1R3E-202ENST00000558058 LINC00116Q8NCU8 138 aa13.01□□□□□ -0.33
PPP1R3E-202ENST00000558058 ITGB4P16144 1822 aa13.01□□□□□ -0.33
PPP1R3E-202ENST00000558058 ADAMTS7Q9UKP4 1686 aa13.01□□□□□ -0.33
PPP1R3E-202ENST00000558058 BCL11BQ9C0K0 894 aaPredicted RBP13.01□□□□□ -0.33
PPP1R3E-202ENST00000558058 FAM13BQ9NYF5 915 aa13.01□□□□□ -0.33
PPP1R3E-202ENST00000558058 GNPATO15228 680 aa13.01□□□□□ -0.33
PPP1R3E-202ENST00000558058 HMMRO75330 724 aa13.01□□□□□ -0.33
PPP1R3E-202ENST00000558058 TPM2P07951 284 aa13.01□□□□□ -0.33
PPP1R3E-202ENST00000558058 KAZALD1Q96I82 304 aa13.01□□□□□ -0.33
PPP1R3E-202ENST00000558058 GLI3P10071 1580 aa13□□□□□ -0.33
PPP1R3E-202ENST00000558058 NUTM1Q86Y26 1132 aa13□□□□□ -0.33
PPP1R3E-202ENST00000558058 NUCB1Q02818 461 aa13□□□□□ -0.33
PPP1R3E-202ENST00000558058 CCDC87Q9NVE4 849 aa13□□□□□ -0.33
PPP1R3E-202ENST00000558058 MRE11P49959 708 aa13□□□□□ -0.33
PPP1R3E-202ENST00000558058 MAP4K4O95819 1239 aaPredicted RBP12.99□□□□□ -0.33
PPP1R3E-202ENST00000558058 INTS5Q6P9B9 1019 aaKnown RBP12.99□□□□□ -0.33
PPP1R3E-202ENST00000558058 POTEAQ6S8J7 498 aa12.99□□□□□ -0.33
PPP1R3E-202ENST00000558058 DCTPP1Q9H773 170 aa12.99□□□□□ -0.33
PPP1R3E-202ENST00000558058 SRP68Q9UHB9 627 aaKnown RBP12.99□□□□□ -0.33
PPP1R3E-202ENST00000558058 NWD2Q9ULI1 1742 aa12.99□□□□□ -0.33
PPP1R3E-202ENST00000558058 LMBR1LQ6UX01 489 aa12.99□□□□□ -0.33
PPP1R3E-202ENST00000558058 ZNF594Q96JF6 807 aaPredicted RBP12.99□□□□□ -0.33
PPP1R3E-202ENST00000558058 ATP8B2P98198 1209 aa12.98□□□□□ -0.33
PPP1R3E-202ENST00000558058 TEX13AQ9BXU3 409 aaPredicted RBP12.98□□□□□ -0.33
PPP1R3E-202ENST00000558058 CWC25Q9NXE8 425 aaPredicted RBP12.98□□□□□ -0.33
PPP1R3E-202ENST00000558058 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.98□□□□□ -0.33
PPP1R3E-202ENST00000558058 GCC1Q96CN9 775 aa12.98□□□□□ -0.33
PPP1R3E-202ENST00000558058 ALDH1L1O75891 902 aa12.98□□□□□ -0.33
PPP1R3E-202ENST00000558058 RXRBP28702 533 aa12.97□□□□□ -0.33
PPP1R3E-202ENST00000558058 LRRC4BQ9NT99 713 aa12.97□□□□□ -0.33
PPP1R3E-202ENST00000558058 TRMT112Q9UI30 125 aaKnown RBP12.97□□□□□ -0.33
PPP1R3E-202ENST00000558058 HCLS1P14317 486 aaPredicted RBP12.97□□□□□ -0.33
PPP1R3E-202ENST00000558058 BECN1Q14457 450 aa12.97□□□□□ -0.33
PPP1R3E-202ENST00000558058 RBM6P78332 1123 aaKnown RBP12.96□□□□□ -0.33
PPP1R3E-202ENST00000558058 RGS17Q9UGC6 210 aaPredicted RBP12.96□□□□□ -0.33
PPP1R3E-202ENST00000558058 ATRNO75882 1429 aa12.96□□□□□ -0.33
PPP1R3E-202ENST00000558058 NPHP1O15259 732 aa12.96□□□□□ -0.33
PPP1R3E-202ENST00000558058 SMARCC1Q92922 1105 aaPredicted RBP12.96□□□□□ -0.33
PPP1R3E-202ENST00000558058 MAP3K15Q6ZN16 1313 aa12.96□□□□□ -0.34
PPP1R3E-202ENST00000558058 TCIRG1Q13488 830 aa12.96□□□□□ -0.34
PPP1R3E-202ENST00000558058 ZNF772Q68DY9 489 aaPredicted RBP12.96□□□□□ -0.34
PPP1R3E-202ENST00000558058 LRRCC1Q9C099 1032 aa12.96□□□□□ -0.34
PPP1R3E-202ENST00000558058 NIP7Q9Y221 180 aaKnown RBP eCLIP12.96□□□□□ -0.34
PPP1R3E-202ENST00000558058 FAM196AQ6ZSG2 479 aa12.95□□□□□ -0.34
PPP1R3E-202ENST00000558058 PLEKHG2Q9H7P9 1386 aa12.95□□□□□ -0.34
PPP1R3E-202ENST00000558058 APBA3O96018 575 aa12.94□□□□□ -0.34
PPP1R3E-202ENST00000558058 EIF5P55010 431 aaKnown RBP12.94□□□□□ -0.34
PPP1R3E-202ENST00000558058 MFAP1P55081 439 aaKnown RBP12.94□□□□□ -0.34
PPP1R3E-202ENST00000558058 GIGYF2Q6Y7W6 1299 aaKnown RBP12.94□□□□□ -0.34
PPP1R3E-202ENST00000558058 TRIM44Q96DX7 344 aaPredicted RBP12.94□□□□□ -0.34
PPP1R3E-202ENST00000558058 CCDC8Q9H0W5 538 aaPredicted RBP12.94□□□□□ -0.34
PPP1R3E-202ENST00000558058 UBN2Q6ZU65 1347 aa12.94□□□□□ -0.34
PPP1R3E-202ENST00000558058 IL6STP40189 918 aaPredicted RBP12.94□□□□□ -0.34
PPP1R3E-202ENST00000558058 USPL1Q5W0Q7 1092 aa12.94□□□□□ -0.34
PPP1R3E-202ENST00000558058 SSH3Q8TE77 659 aa12.94□□□□□ -0.34
PPP1R3E-202ENST00000558058 NDUFB9Q9Y6M9 179 aa12.94□□□□□ -0.34
PPP1R3E-202ENST00000558058 CACNA1FO60840 1977 aa12.93□□□□□ -0.34
PPP1R3E-202ENST00000558058 GTF2E1P29083 439 aaPredicted RBP12.93□□□□□ -0.34
PPP1R3E-202ENST00000558058 PLEKHM2Q8IWE5 1019 aa12.93□□□□□ -0.34
PPP1R3E-202ENST00000558058 TRIM6-TRIM34B2RNG4 842 aa12.93□□□□□ -0.34
PPP1R3E-202ENST00000558058 NLRP10Q86W26 655 aa12.93□□□□□ -0.34
PPP1R3E-202ENST00000558058 RHPN1Q8TCX5 695 aa12.93□□□□□ -0.34
PPP1R3E-202ENST00000558058 RILPL2Q969X0 211 aa12.93□□□□□ -0.34
PPP1R3E-202ENST00000558058 R3HCC1Q9Y3T6 440 aaKnown RBP12.93□□□□□ -0.34
PPP1R3E-202ENST00000558058 AK7Q96M32 723 aa12.92□□□□□ -0.34
PPP1R3E-202ENST00000558058 MYH14Q7Z406 1995 aaKnown RBP12.92□□□□□ -0.34
PPP1R3E-202ENST00000558058 WNK3Q9BYP7 1800 aa12.92□□□□□ -0.34
PPP1R3E-202ENST00000558058 ONECUT3O60422 494 aaPredicted RBP12.92□□□□□ -0.34
PPP1R3E-202ENST00000558058 GSPT1P15170 499 aaKnown RBP12.92□□□□□ -0.34
PPP1R3E-202ENST00000558058 G3BP1Q13283 466 aaKnown RBP eCLIP12.92□□□□□ -0.34
PPP1R3E-202ENST00000558058 BBXQ8WY36 941 aaPredicted RBP12.92□□□□□ -0.34
PPP1R3E-202ENST00000558058 TBC1D32Q96NH3 1257 aa12.92□□□□□ -0.34
PPP1R3E-202ENST00000558058 PUS3Q9BZE2 481 aaKnown RBP12.92□□□□□ -0.34
PPP1R3E-202ENST00000558058 TAF7LQ5H9L4 462 aa12.92□□□□□ -0.34
PPP1R3E-202ENST00000558058 SUSD4Q5VX71 490 aa12.92□□□□□ -0.34
PPP1R3E-202ENST00000558058 FBXO41Q8TF61 875 aa12.92□□□□□ -0.34
PPP1R3E-202ENST00000558058 TLR7Q9NYK1 1049 aaKnown RBP12.92□□□□□ -0.34
PPP1R3E-202ENST00000558058 COL15A1P39059 1388 aa12.92□□□□□ -0.34
PPP1R3E-202ENST00000558058 CCDC191Q8NCU4 936 aa12.91□□□□□ -0.34
PPP1R3E-202ENST00000558058 RTCBQ9Y3I0 505 aaKnown RBP12.91□□□□□ -0.34
PPP1R3E-202ENST00000558058 UBR2Q8IWV8 1755 aa12.91□□□□□ -0.34
PPP1R3E-202ENST00000558058 LRRC24Q50LG9 513 aa12.91□□□□□ -0.34
PPP1R3E-202ENST00000558058 AACSQ86V21 672 aa12.91□□□□□ -0.34
PPP1R3E-202ENST00000558058 PXDNLA1KZ92 1463 aa12.91□□□□□ -0.34
PPP1R3E-202ENST00000558058 SNAP23O00161 211 aa12.9□□□□□ -0.34
PPP1R3E-202ENST00000558058 IRS4O14654 1257 aaPredicted RBP12.9□□□□□ -0.34
PPP1R3E-202ENST00000558058 CAMTA2O94983 1202 aa12.9□□□□□ -0.34
PPP1R3E-202ENST00000558058 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.9□□□□□ -0.34
PPP1R3E-202ENST00000558058 ZPR1O75312 459 aa12.9□□□□□ -0.34
PPP1R3E-202ENST00000558058 OFD1O75665 1012 aa12.9□□□□□ -0.34
PPP1R3E-202ENST00000558058 ARHGEF1Q92888 912 aaKnown RBP12.9□□□□□ -0.34
PPP1R3E-202ENST00000558058 NEUROD6Q96NK8 337 aa12.9□□□□□ -0.34
PPP1R3E-202ENST00000558058 ISCA1Q9BUE6 129 aa12.9□□□□□ -0.34
PPP1R3E-202ENST00000558058 HELBQ8NG08 1087 aaPredicted RBP12.9□□□□□ -0.34
PPP1R3E-202ENST00000558058 GREM2Q9H772 168 aa12.9□□□□□ -0.34
PPP1R3E-202ENST00000558058 IBTKQ9P2D0 1353 aaPredicted RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms