RNA–Protein interactions for RNA: ENST00000557966.1

AC027088.1-201, humanhuman

TSL 2 BASIC

Gene AC027088.1, Length 1,117 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC027088.1-201ENST00000557966 IFT57Q9NWB7 429 aa21.11■□□□□ 0.97
AC027088.1-201ENST00000557966 PPP1R42Q7Z4L9 355 aa21.09■□□□□ 0.97
AC027088.1-201ENST00000557966 SLC51AQ86UW1 340 aa21.09■□□□□ 0.97
AC027088.1-201ENST00000557966 ALDH1B1P30837 517 aa21.08■□□□□ 0.97
AC027088.1-201ENST00000557966 GNAI1P63096 354 aa21.08■□□□□ 0.97
AC027088.1-201ENST00000557966 NLRP10Q86W26 655 aa21.08■□□□□ 0.97
AC027088.1-201ENST00000557966 RBM46Q8TBY0 533 aaKnown RBP21.08■□□□□ 0.97
AC027088.1-201ENST00000557966 WDR90Q96KV7 1748 aa21.07■□□□□ 0.96
AC027088.1-201ENST00000557966 HOXA10P31260 410 aaPredicted RBP21.07■□□□□ 0.96
AC027088.1-201ENST00000557966 FKBP4Q02790 459 aaKnown RBP eCLIP21.07■□□□□ 0.96
AC027088.1-201ENST00000557966 HSP90AB3PQ58FF7 597 aa21.07■□□□□ 0.96
AC027088.1-201ENST00000557966 UTP14AQ9BVJ6 771 aaKnown RBP21.07■□□□□ 0.96
AC027088.1-201ENST00000557966 CALD1Q05682 793 aaKnown RBP21.06■□□□□ 0.96
AC027088.1-201ENST00000557966 TCIRG1Q13488 830 aa21.06■□□□□ 0.96
AC027088.1-201ENST00000557966 C16orf71Q8IYS4 520 aaPredicted RBP21.06■□□□□ 0.96
AC027088.1-201ENST00000557966 RPGRQ92834 1020 aaKnown RBP21.06■□□□□ 0.96
AC027088.1-201ENST00000557966 DBF4Q9UBU7 674 aaPredicted RBP21.06■□□□□ 0.96
AC027088.1-201ENST00000557966 POTECB2RU33 542 aa21.05■□□□□ 0.96
AC027088.1-201ENST00000557966 ANP32CO43423 234 aa21.05■□□□□ 0.96
AC027088.1-201ENST00000557966 SLC10A5Q5PT55 438 aa21.05■□□□□ 0.96
AC027088.1-201ENST00000557966 MRS2Q9HD23 443 aa21.05■□□□□ 0.96
AC027088.1-201ENST00000557966 ZNF277Q9NRM2 450 aaPredicted RBP21.05■□□□□ 0.96
AC027088.1-201ENST00000557966 LAMB2P55268 1798 aa21.05■□□□□ 0.96
AC027088.1-201ENST00000557966 RNF123Q5XPI4 1314 aa21.04■□□□□ 0.96
AC027088.1-201ENST00000557966 ELL2O00472 640 aaPredicted RBP21.04■□□□□ 0.96
AC027088.1-201ENST00000557966 SYNE4Q8N205 404 aa21.04■□□□□ 0.96
AC027088.1-201ENST00000557966 C8orf58Q8NAV2 365 aa21.04■□□□□ 0.96
AC027088.1-201ENST00000557966 PLBD2Q8NHP8 589 aa21.04■□□□□ 0.96
AC027088.1-201ENST00000557966 ZNF428Q96B54 188 aa21.04■□□□□ 0.96
AC027088.1-201ENST00000557966 CEP350Q5VT06 3117 aa21.04■□□□□ 0.96
AC027088.1-201ENST00000557966 RTKN2Q8IZC4 609 aa21.03■□□□□ 0.96
AC027088.1-201ENST00000557966 NLRP3Q96P20 1036 aa21.03■□□□□ 0.96
AC027088.1-201ENST00000557966 CRAMP1Q96RY5 1269 aa21.03■□□□□ 0.96
AC027088.1-201ENST00000557966 VEGFAP15692 232 aaPredicted RBP21.02■□□□□ 0.96
AC027088.1-201ENST00000557966 DPY19L2Q6NUT2 758 aa21.02■□□□□ 0.96
AC027088.1-201ENST00000557966 ANKRD13DQ6ZTN6 518 aa21.02■□□□□ 0.96
AC027088.1-201ENST00000557966 RBM17Q96I25 401 aaKnown RBP21.02■□□□□ 0.96
AC027088.1-201ENST00000557966 ISCA1Q9BUE6 129 aa21.02■□□□□ 0.96
AC027088.1-201ENST00000557966 HYPKQ9NX55 129 aa21.02■□□□□ 0.96
AC027088.1-201ENST00000557966 COL4A5P29400 1685 aa21.02■□□□□ 0.95
AC027088.1-201ENST00000557966 PPEF1O14829 653 aaPredicted RBP21.01■□□□□ 0.95
AC027088.1-201ENST00000557966 DDNO94850 711 aaPredicted RBP21.01■□□□□ 0.95
AC027088.1-201ENST00000557966 HCLS1P14317 486 aaPredicted RBP21.01■□□□□ 0.95
AC027088.1-201ENST00000557966 FSTL1Q12841 308 aa21.01■□□□□ 0.95
AC027088.1-201ENST00000557966 CCDC27Q2M243 656 aa21.01■□□□□ 0.95
AC027088.1-201ENST00000557966 TSR2Q969E8 191 aaKnown RBP21.01■□□□□ 0.95
AC027088.1-201ENST00000557966 PHAXQ9H814 394 aaKnown RBP21.01■□□□□ 0.95
AC027088.1-201ENST00000557966 TRMT112Q9UI30 125 aaKnown RBP21.01■□□□□ 0.95
AC027088.1-201ENST00000557966 ABCC4O15439 1325 aa21.01■□□□□ 0.95
AC027088.1-201ENST00000557966 DDX60Q8IY21 1712 aaKnown RBP21.01■□□□□ 0.95
AC027088.1-201ENST00000557966 IARSP41252 1262 aaKnown RBP21■□□□□ 0.95
AC027088.1-201ENST00000557966 WWC1Q8IX03 1113 aa21■□□□□ 0.95
AC027088.1-201ENST00000557966 TSPYL6Q8N831 410 aa21■□□□□ 0.95
AC027088.1-201ENST00000557966 PSMD1Q99460 953 aa21■□□□□ 0.95
AC027088.1-201ENST00000557966 SH3TC1Q8TE82 1336 aa21■□□□□ 0.95
AC027088.1-201ENST00000557966 ZNF541Q9H0D2 1346 aa21■□□□□ 0.95
AC027088.1-201ENST00000557966 ATP5J2-PTCD1G3V325 749 aa20.99■□□□□ 0.95
AC027088.1-201ENST00000557966 TCERG1O14776 1098 aaKnown RBP20.99■□□□□ 0.95
AC027088.1-201ENST00000557966 CC2D2BQ6DHV5 1058 aa20.99■□□□□ 0.95
AC027088.1-201ENST00000557966 APLP1P51693 650 aa20.98■□□□□ 0.95
AC027088.1-201ENST00000557966 SMC1BQ8NDV3 1235 aa20.98■□□□□ 0.95
AC027088.1-201ENST00000557966 COL4A1P02462 1669 aa20.96■□□□□ 0.95
AC027088.1-201ENST00000557966 FZD9O00144 591 aa20.95■□□□□ 0.94
AC027088.1-201ENST00000557966 HTRA3P83110 453 aa20.95■□□□□ 0.94
AC027088.1-201ENST00000557966 GOLGA2Q08379 1002 aa20.95■□□□□ 0.94
AC027088.1-201ENST00000557966 NCBP3Q53F19 620 aaKnown RBP20.95■□□□□ 0.94
AC027088.1-201ENST00000557966 FAM89AQ96GI7 184 aa20.95■□□□□ 0.94
AC027088.1-201ENST00000557966 ATP6V0A2Q9Y487 856 aa20.95■□□□□ 0.94
AC027088.1-201ENST00000557966 POTEIP0CG38 1075 aa20.94■□□□□ 0.94
AC027088.1-201ENST00000557966 POTEJP0CG39 1038 aa20.94■□□□□ 0.94
AC027088.1-201ENST00000557966 RIC3Q7Z5B4 369 aa20.94■□□□□ 0.94
AC027088.1-201ENST00000557966 L3MBTL3Q96JM7 780 aaPredicted RBP20.94■□□□□ 0.94
AC027088.1-201ENST00000557966 IL16Q14005 1332 aa20.94■□□□□ 0.94
AC027088.1-201ENST00000557966 TRIM28Q13263 835 aaKnown RBP20.93■□□□□ 0.94
AC027088.1-201ENST00000557966 RTL5Q5HYW3 569 aaPredicted RBP20.93■□□□□ 0.94
AC027088.1-201ENST00000557966 CCDC30Q5VVM6 783 aa20.93■□□□□ 0.94
AC027088.1-201ENST00000557966 TAF1P21675 1872 aa20.92■□□□□ 0.94
AC027088.1-201ENST00000557966 GRAPQ13588 217 aa20.92■□□□□ 0.94
AC027088.1-201ENST00000557966 GRIPAP1Q4V328 841 aa20.92■□□□□ 0.94
AC027088.1-201ENST00000557966 DDX46Q7L014 1031 aaKnown RBP20.92■□□□□ 0.94
AC027088.1-201ENST00000557966 GRAPLQ8TC17 118 aaPredicted RBP20.92■□□□□ 0.94
AC027088.1-201ENST00000557966 MYD88Q99836 296 aa20.92■□□□□ 0.94
AC027088.1-201ENST00000557966 SALL2Q9Y467 1007 aaPredicted RBP20.92■□□□□ 0.94
AC027088.1-201ENST00000557966 LRRC37AA6NMS7 1700 aa20.91■□□□□ 0.94
AC027088.1-201ENST00000557966 TWISTNBQ3B726 338 aaPredicted RBP20.91■□□□□ 0.94
AC027088.1-201ENST00000557966 DNAJC5GQ8N7S2 189 aa20.91■□□□□ 0.94
AC027088.1-201ENST00000557966 DUOX1Q9NRD9 1551 aa20.91■□□□□ 0.94
AC027088.1-201ENST00000557966 FANCIQ9NVI1 1328 aa20.91■□□□□ 0.94
AC027088.1-201ENST00000557966 SCN4AP35499 1836 aa20.9■□□□□ 0.94
AC027088.1-201ENST00000557966 BBOX1O75936 387 aa20.9■□□□□ 0.94
AC027088.1-201ENST00000557966 SF3B3Q15393 1217 aaKnown RBP20.9■□□□□ 0.94
AC027088.1-201ENST00000557966 SP8Q8IXZ3 490 aa20.9■□□□□ 0.94
AC027088.1-201ENST00000557966 LARGE2Q8N3Y3 721 aa20.9■□□□□ 0.94
AC027088.1-201ENST00000557966 JDP2Q8WYK2 163 aa20.9■□□□□ 0.94
AC027088.1-201ENST00000557966 TAF1DQ9H5J8 278 aaPredicted RBP20.9■□□□□ 0.94
AC027088.1-201ENST00000557966 IQCA1LA6NCM1 817 aa20.89■□□□□ 0.93
AC027088.1-201ENST00000557966 IRS4O14654 1257 aaPredicted RBP20.89■□□□□ 0.93
AC027088.1-201ENST00000557966 CELF1Q92879 486 aaKnown RBP20.89■□□□□ 0.93
AC027088.1-201ENST00000557966 LTBP1Q14766 1721 aa20.88■□□□□ 0.93
AC027088.1-201ENST00000557966 PPIP5K2O43314 1243 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms