RNA–Protein interactions for RNA: ENST00000557797.5

SHC4-204, Transcript of SHC adaptor protein 4, humanhuman

TSL 3

Gene SHC4, Length 821 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4-204ENST00000557797 MCM6Q14566 821 aa10.76□□□□□ -0.69
SHC4-204ENST00000557797 SLC10A4Q96EP9 437 aa10.76□□□□□ -0.69
SHC4-204ENST00000557797 FAM83GA6ND36 823 aa10.75□□□□□ -0.69
SHC4-204ENST00000557797 TRIM37O94972 964 aa10.75□□□□□ -0.69
SHC4-204ENST00000557797 APBA3O96018 575 aa10.75□□□□□ -0.69
SHC4-204ENST00000557797 FAM196AQ6ZSG2 479 aa10.75□□□□□ -0.69
SHC4-204ENST00000557797 TBC1D2BQ9UPU7 963 aa10.75□□□□□ -0.69
SHC4-204ENST00000557797 COL14A1Q05707 1796 aaKnown RBP10.75□□□□□ -0.69
SHC4-204ENST00000557797 MYOM1P52179 1685 aa10.74□□□□□ -0.69
SHC4-204ENST00000557797 APBB1O00213 710 aa10.74□□□□□ -0.69
SHC4-204ENST00000557797 CAPN5O15484 640 aaPredicted RBP10.74□□□□□ -0.69
SHC4-204ENST00000557797 WDR4P57081 412 aaKnown RBP10.74□□□□□ -0.69
SHC4-204ENST00000557797 ATP13A2Q9NQ11 1180 aa10.74□□□□□ -0.69
SHC4-204ENST00000557797 FMN2Q9NZ56 1722 aa10.74□□□□□ -0.69
SHC4-204ENST00000557797 SPATA31A5Q5VU36 1347 aa10.74□□□□□ -0.69
SHC4-204ENST00000557797 SPATA31A7Q8IWB4 1347 aa10.74□□□□□ -0.69
SHC4-204ENST00000557797 RGPD3A6NKT7 1758 aaPredicted RBP10.74□□□□□ -0.69
SHC4-204ENST00000557797 RGPD4Q7Z3J3 1758 aa10.74□□□□□ -0.69
SHC4-204ENST00000557797 VPS8Q8N3P4 1428 aa10.74□□□□□ -0.69
SHC4-204ENST00000557797 GIGYF1O75420 1035 aaPredicted RBP10.73□□□□□ -0.69
SHC4-204ENST00000557797 ZNF326Q5BKZ1 582 aaKnown RBP10.73□□□□□ -0.69
SHC4-204ENST00000557797 ITPKCQ96DU7 683 aa10.73□□□□□ -0.69
SHC4-204ENST00000557797 KCTD15Q96SI1 283 aaPredicted RBP10.73□□□□□ -0.69
SHC4-204ENST00000557797 GMPR2Q9P2T1 348 aaKnown RBP10.73□□□□□ -0.69
SHC4-204ENST00000557797 CDV3Q9UKY7 258 aaKnown RBP10.73□□□□□ -0.69
SHC4-204ENST00000557797 NAIPQ13075 1403 aa10.73□□□□□ -0.69
SHC4-204ENST00000557797 RRBP1Q9P2E9 1410 aaKnown RBP10.73□□□□□ -0.69
SHC4-204ENST00000557797 ZNF787Q6DD87 383 aa10.72□□□□□ -0.69
SHC4-204ENST00000557797 KRT28Q7Z3Y7 464 aa10.72□□□□□ -0.69
SHC4-204ENST00000557797 TRIM46Q7Z4K8 759 aa10.72□□□□□ -0.69
SHC4-204ENST00000557797 ZFAND3Q9H8U3 227 aa10.72□□□□□ -0.69
SHC4-204ENST00000557797 SBNO1A3KN83 1393 aa10.72□□□□□ -0.69
SHC4-204ENST00000557797 ARHGEF10O15013 1369 aa10.72□□□□□ -0.69
SHC4-204ENST00000557797 ZIC2O95409 532 aaPredicted RBP10.71□□□□□ -0.69
SHC4-204ENST00000557797 BMP1P13497 986 aa10.71□□□□□ -0.69
SHC4-204ENST00000557797 BTG4Q9NY30 223 aa10.71□□□□□ -0.69
SHC4-204ENST00000557797 NR1H3Q13133 447 aa10.7□□□□□ -0.7
SHC4-204ENST00000557797 IRF5Q13568 498 aa10.7□□□□□ -0.7
SHC4-204ENST00000557797 INTS6LQ5JSJ4 861 aaKnown RBP10.7□□□□□ -0.7
SHC4-204ENST00000557797 DZIP3Q86Y13 1208 aaKnown RBP10.7□□□□□ -0.7
SHC4-204ENST00000557797 CCDC116Q8IYX3 515 aa10.7□□□□□ -0.7
SHC4-204ENST00000557797 KIF1BO60333 1816 aa10.69□□□□□ -0.7
SHC4-204ENST00000557797 CLTCL1P53675 1640 aa10.69□□□□□ -0.7
SHC4-204ENST00000557797 DLC1Q96QB1 1528 aa10.68□□□□□ -0.7
SHC4-204ENST00000557797 TECPR2O15040 1411 aa10.68□□□□□ -0.7
SHC4-204ENST00000557797 RGPD8O14715 1765 aaPredicted RBP10.68□□□□□ -0.7
SHC4-204ENST00000557797 SHANK3Q9BYB0 1731 aa10.68□□□□□ -0.7
SHC4-204ENST00000557797 ESPNB1AK53 854 aa10.68□□□□□ -0.7
SHC4-204ENST00000557797 PSME1Q06323 249 aa10.68□□□□□ -0.7
SHC4-204ENST00000557797 NBPF20Q3BBV1 942 aa10.68□□□□□ -0.7
SHC4-204ENST00000557797 PPP1R26Q5T8A7 1209 aaPredicted RBP10.68□□□□□ -0.7
SHC4-204ENST00000557797 HOMEZQ8IX15 550 aa10.68□□□□□ -0.7
SHC4-204ENST00000557797 SYT17Q9BSW7 474 aa10.68□□□□□ -0.7
SHC4-204ENST00000557797 GDPD2Q9HCC8 539 aa10.68□□□□□ -0.7
SHC4-204ENST00000557797 NRXN1Q9ULB1 1477 aa10.68□□□□□ -0.7
SHC4-204ENST00000557797 PCDHB9Q9Y5E1 797 aa10.67□□□□□ -0.7
SHC4-204ENST00000557797 CRYBG1Q9Y4K1 1723 aa10.67□□□□□ -0.7
SHC4-204ENST00000557797 MAP3K5Q99683 1374 aa10.66□□□□□ -0.7
SHC4-204ENST00000557797 SPATA31A1Q5TZJ5 1347 aa10.66□□□□□ -0.7
SHC4-204ENST00000557797 FHDC1Q9C0D6 1143 aaPredicted RBP10.66□□□□□ -0.7
SHC4-204ENST00000557797 EMILIN1Q9Y6C2 1016 aa10.66□□□□□ -0.7
SHC4-204ENST00000557797 KNDC1Q76NI1 1749 aa10.66□□□□□ -0.7
SHC4-204ENST00000557797 TRPM3Q9HCF6 1732 aaPredicted RBP10.66□□□□□ -0.7
SHC4-204ENST00000557797 ALS2Q96Q42 1657 aa10.66□□□□□ -0.7
SHC4-204ENST00000557797 NUP155O75694 1391 aa10.65□□□□□ -0.7
SHC4-204ENST00000557797 IFT172Q9UG01 1749 aa10.65□□□□□ -0.7
SHC4-204ENST00000557797 TRIM47Q96LD4 638 aa10.65□□□□□ -0.7
SHC4-204ENST00000557797 SNRPBP14678 240 aaKnown RBP10.64□□□□□ -0.71
SHC4-204ENST00000557797 MRPL14Q6P1L8 145 aaKnown RBP10.64□□□□□ -0.71
SHC4-204ENST00000557797 PRM3Q9NNZ6 103 aa10.64□□□□□ -0.71
SHC4-204ENST00000557797 COG6Q9Y2V7 657 aa10.64□□□□□ -0.71
SHC4-204ENST00000557797 PPLO60437 1756 aa10.64□□□□□ -0.71
SHC4-204ENST00000557797 C11orf95C9JLR9 678 aaPredicted RBP10.63□□□□□ -0.71
SHC4-204ENST00000557797 MEIOBQ8N635 442 aa10.63□□□□□ -0.71
SHC4-204ENST00000557797 PDGFDQ9GZP0 370 aaPredicted RBP10.63□□□□□ -0.71
SHC4-204ENST00000557797 TMPRSS4Q9NRS4 437 aa10.63□□□□□ -0.71
SHC4-204ENST00000557797 SBF2Q86WG5 1849 aa10.63□□□□□ -0.71
SHC4-204ENST00000557797 ERVH48-1M5A8F1 160 aa10.62□□□□□ -0.71
SHC4-204ENST00000557797 PLSCR1O15162 318 aa10.62□□□□□ -0.71
SHC4-204ENST00000557797 ZBTB7AO95365 584 aa10.62□□□□□ -0.71
SHC4-204ENST00000557797 ABL2P42684 1182 aa10.62□□□□□ -0.71
SHC4-204ENST00000557797 RAB15P59190 212 aa10.62□□□□□ -0.71
SHC4-204ENST00000557797 DHX9Q08211 1270 aaKnown RBP10.62□□□□□ -0.71
SHC4-204ENST00000557797 CBLBQ13191 982 aa10.62□□□□□ -0.71
SHC4-204ENST00000557797 POM121Q96HA1 1249 aa10.62□□□□□ -0.71
SHC4-204ENST00000557797 ZFP42Q96MM3 310 aa10.62□□□□□ -0.71
SHC4-204ENST00000557797 ROCK1Q13464 1354 aa10.62□□□□□ -0.71
SHC4-204ENST00000557797 PEAK1Q9H792 1746 aa10.61□□□□□ -0.71
SHC4-204ENST00000557797 HSPA6P17066 643 aa10.61□□□□□ -0.71
SHC4-204ENST00000557797 PDE3BQ13370 1112 aa10.61□□□□□ -0.71
SHC4-204ENST00000557797 WAPLQ7Z5K2 1190 aa10.61□□□□□ -0.71
SHC4-204ENST00000557797 SENP2Q9HC62 589 aa10.61□□□□□ -0.71
SHC4-204ENST00000557797 PGPEP1Q9NXJ5 209 aa10.61□□□□□ -0.71
SHC4-204ENST00000557797 ABCC11Q96J66 1382 aa10.61□□□□□ -0.71
SHC4-204ENST00000557797 RPGRIP1LQ68CZ1 1315 aa10.6□□□□□ -0.71
SHC4-204ENST00000557797 PCNTO95613 3336 aa10.6□□□□□ -0.71
SHC4-204ENST00000557797 FLIIQ13045 1269 aa10.6□□□□□ -0.71
SHC4-204ENST00000557797 Q6ZVU0 165 aa10.6□□□□□ -0.71
SHC4-204ENST00000557797 PURBQ96QR8 312 aaKnown RBP10.6□□□□□ -0.71
SHC4-204ENST00000557797 PARP4Q9UKK3 1724 aaKnown RBP10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms