RNA–Protein interactions for RNA: ENST00000557792.1

CRNDE-203, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 2

Gene CRNDE, Length 481 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-203ENST00000557792 XAGE3Q8WTP9 111 aa28.22■■■□□ 2.11
CRNDE-203ENST00000557792 C7orf43Q8WVR3 580 aa28.22■■■□□ 2.11
CRNDE-203ENST00000557792 CHPF2Q9P2E5 772 aa28.22■■■□□ 2.11
CRNDE-203ENST00000557792 AIMP1Q12904 312 aaKnown RBP28.21■■■□□ 2.11
CRNDE-203ENST00000557792 FAM9BQ8IZU0 186 aa28.21■■■□□ 2.11
CRNDE-203ENST00000557792 ELL2O00472 640 aaPredicted RBP28.2■■■□□ 2.1
CRNDE-203ENST00000557792 GPTP24298 496 aa28.2■■■□□ 2.1
CRNDE-203ENST00000557792 NCBP3Q53F19 620 aaKnown RBP28.2■■■□□ 2.1
CRNDE-203ENST00000557792 ZNF34Q8IZ26 560 aa28.2■■■□□ 2.1
CRNDE-203ENST00000557792 CCDC93Q567U6 631 aa28.19■■■□□ 2.1
CRNDE-203ENST00000557792 C8orf58Q8NAV2 365 aa28.19■■■□□ 2.1
CRNDE-203ENST00000557792 NUP98P52948 1817 aa28.19■■■□□ 2.1
CRNDE-203ENST00000557792 DDNO94850 711 aaPredicted RBP28.18■■■□□ 2.1
CRNDE-203ENST00000557792 DBF4Q9UBU7 674 aaPredicted RBP28.18■■■□□ 2.1
CRNDE-203ENST00000557792 SALL2Q9Y467 1007 aaPredicted RBP28.18■■■□□ 2.1
CRNDE-203ENST00000557792 UBN2Q6ZU65 1347 aa28.18■■■□□ 2.1
CRNDE-203ENST00000557792 GTF2E1P29083 439 aaPredicted RBP28.17■■■□□ 2.1
CRNDE-203ENST00000557792 SUSD4Q5VX71 490 aa28.17■■■□□ 2.1
CRNDE-203ENST00000557792 NUTM1Q86Y26 1132 aa28.16■■■□□ 2.1
CRNDE-203ENST00000557792 TSR2Q969E8 191 aaKnown RBP28.16■■■□□ 2.1
CRNDE-203ENST00000557792 NYXQ9GZU5 481 aa28.16■■■□□ 2.1
CRNDE-203ENST00000557792 OLFM4Q6UX06 510 aa28.15■■■□□ 2.1
CRNDE-203ENST00000557792 FKBP4Q02790 459 aaKnown RBP eCLIP28.14■■■□□ 2.1
CRNDE-203ENST00000557792 TSPYL6Q8N831 410 aa28.13■■■□□ 2.09
CRNDE-203ENST00000557792 HYPKQ9NX55 129 aa28.13■■■□□ 2.09
CRNDE-203ENST00000557792 ABCC12Q96J65 1359 aa28.12■■■□□ 2.09
CRNDE-203ENST00000557792 ZNF277Q9NRM2 450 aaPredicted RBP28.12■■■□□ 2.09
CRNDE-203ENST00000557792 IL16Q14005 1332 aa28.12■■■□□ 2.09
CRNDE-203ENST00000557792 POTEIP0CG38 1075 aa28.11■■■□□ 2.09
CRNDE-203ENST00000557792 POTEJP0CG39 1038 aa28.11■■■□□ 2.09
CRNDE-203ENST00000557792 ALDH1B1P30837 517 aa28.11■■■□□ 2.09
CRNDE-203ENST00000557792 TCIRG1Q13488 830 aa28.11■■■□□ 2.09
CRNDE-203ENST00000557792 PARP10Q53GL7 1025 aa28.11■■■□□ 2.09
CRNDE-203ENST00000557792 ANKRD13DQ6ZTN6 518 aa28.11■■■□□ 2.09
CRNDE-203ENST00000557792 RTKN2Q8IZC4 609 aa28.11■■■□□ 2.09
CRNDE-203ENST00000557792 NTSR2O95665 410 aa28.1■■■□□ 2.09
CRNDE-203ENST00000557792 CHADLQ6NUI6 762 aa28.1■■■□□ 2.09
CRNDE-203ENST00000557792 PPP1R42Q7Z4L9 355 aa28.1■■■□□ 2.09
CRNDE-203ENST00000557792 PLBD2Q8NHP8 589 aa28.1■■■□□ 2.09
CRNDE-203ENST00000557792 SCN4AP35499 1836 aa28.1■■■□□ 2.09
CRNDE-203ENST00000557792 CRY2Q49AN0 593 aa28.09■■■□□ 2.09
CRNDE-203ENST00000557792 HSP90AB3PQ58FF7 597 aa28.09■■■□□ 2.09
CRNDE-203ENST00000557792 WDR63Q8IWG1 891 aa28.09■■■□□ 2.09
CRNDE-203ENST00000557792 L3MBTL3Q96JM7 780 aaPredicted RBP28.09■■■□□ 2.09
CRNDE-203ENST00000557792 UTP14AQ9BVJ6 771 aaKnown RBP28.08■■■□□ 2.09
CRNDE-203ENST00000557792 IBTKQ9P2D0 1353 aaPredicted RBP28.08■■■□□ 2.09
CRNDE-203ENST00000557792 IQCA1LA6NCM1 817 aa28.07■■■□□ 2.08
CRNDE-203ENST00000557792 NLRP10Q86W26 655 aa28.07■■■□□ 2.08
CRNDE-203ENST00000557792 PHAXQ9H814 394 aaKnown RBP28.07■■■□□ 2.08
CRNDE-203ENST00000557792 ZNF541Q9H0D2 1346 aa28.07■■■□□ 2.08
CRNDE-203ENST00000557792 CCDC30Q5VVM6 783 aa28.06■■■□□ 2.08
CRNDE-203ENST00000557792 SYNE4Q8N205 404 aa28.06■■■□□ 2.08
CRNDE-203ENST00000557792 SNED1Q8TER0 1413 aa28.05■■■□□ 2.08
CRNDE-203ENST00000557792 CHMP4AQ9BY43 222 aa28.05■■■□□ 2.08
CRNDE-203ENST00000557792 TAF1DQ9H5J8 278 aaPredicted RBP28.05■■■□□ 2.08
CRNDE-203ENST00000557792 RIC1Q4ADV7 1423 aa28.04■■■□□ 2.08
CRNDE-203ENST00000557792 IARSP41252 1262 aaKnown RBP28.04■■■□□ 2.08
CRNDE-203ENST00000557792 SLC10A5Q5PT55 438 aa28.04■■■□□ 2.08
CRNDE-203ENST00000557792 COL13A1Q5TAT6 717 aaPredicted RBP28.04■■■□□ 2.08
CRNDE-203ENST00000557792 LDHDQ86WU2 507 aa28.03■■■□□ 2.08
CRNDE-203ENST00000557792 FANCIQ9NVI1 1328 aa28.02■■■□□ 2.08
CRNDE-203ENST00000557792 TWISTNBQ3B726 338 aaPredicted RBP28.02■■■□□ 2.08
CRNDE-203ENST00000557792 C3orf67Q6ZVT6 689 aa28.02■■■□□ 2.08
CRNDE-203ENST00000557792 RPGRQ92834 1020 aaKnown RBP28.02■■■□□ 2.08
CRNDE-203ENST00000557792 ZNF428Q96B54 188 aa28.02■■■□□ 2.08
CRNDE-203ENST00000557792 PSMD1Q99460 953 aa28.02■■■□□ 2.08
CRNDE-203ENST00000557792 ISCA1Q9BUE6 129 aa28.02■■■□□ 2.08
CRNDE-203ENST00000557792 SPINK5Q9NQ38 1064 aaPredicted RBP28.02■■■□□ 2.08
CRNDE-203ENST00000557792 CREBZFQ9NS37 354 aa28.02■■■□□ 2.08
CRNDE-203ENST00000557792 ATP5J2-PTCD1G3V325 749 aa28.01■■■□□ 2.07
CRNDE-203ENST00000557792 FZD9O00144 591 aa28.01■■■□□ 2.07
CRNDE-203ENST00000557792 HOXA10P31260 410 aaPredicted RBP28.01■■■□□ 2.07
CRNDE-203ENST00000557792 TRMT112Q9UI30 125 aaKnown RBP28.01■■■□□ 2.07
CRNDE-203ENST00000557792 TCERG1O14776 1098 aaKnown RBP28■■■□□ 2.07
CRNDE-203ENST00000557792 RIC3Q7Z5B4 369 aa28■■■□□ 2.07
CRNDE-203ENST00000557792 NLRP3Q96P20 1036 aa28■■■□□ 2.07
CRNDE-203ENST00000557792 HSPA1AP0DMV8 641 aaKnown RBP27.99■■■□□ 2.07
CRNDE-203ENST00000557792 HSPA1BP0DMV9 641 aaKnown RBP27.99■■■□□ 2.07
CRNDE-203ENST00000557792 GOLGA2Q08379 1002 aa27.99■■■□□ 2.07
CRNDE-203ENST00000557792 CC2D2BQ6DHV5 1058 aa27.99■■■□□ 2.07
CRNDE-203ENST00000557792 HACL1Q9UJ83 578 aa27.99■■■□□ 2.07
CRNDE-203ENST00000557792 RNF123Q5XPI4 1314 aa27.98■■■□□ 2.07
CRNDE-203ENST00000557792 PASKQ96RG2 1323 aa27.98■■■□□ 2.07
CRNDE-203ENST00000557792 HCLS1P14317 486 aaPredicted RBP27.97■■■□□ 2.07
CRNDE-203ENST00000557792 TRIM28Q13263 835 aaKnown RBP27.97■■■□□ 2.07
CRNDE-203ENST00000557792 EAPPQ56P03 285 aaPredicted RBP27.97■■■□□ 2.07
CRNDE-203ENST00000557792 RBM17Q96I25 401 aaKnown RBP27.97■■■□□ 2.07
CRNDE-203ENST00000557792 CRAMP1Q96RY5 1269 aa27.97■■■□□ 2.07
CRNDE-203ENST00000557792 COL4A5P29400 1685 aa27.97■■■□□ 2.07
CRNDE-203ENST00000557792 ADAMTSL1Q8N6G6 1762 aa27.96■■■□□ 2.07
CRNDE-203ENST00000557792 SH3TC1Q8TE82 1336 aa27.96■■■□□ 2.07
CRNDE-203ENST00000557792 EXOSC9Q06265 439 aaKnown RBP27.96■■■□□ 2.07
CRNDE-203ENST00000557792 SLC51AQ86UW1 340 aa27.96■■■□□ 2.07
CRNDE-203ENST00000557792 JDP2Q8WYK2 163 aa27.96■■■□□ 2.07
CRNDE-203ENST00000557792 STK31Q9BXU1 1019 aa27.96■■■□□ 2.07
CRNDE-203ENST00000557792 MKRN1Q9UHC7 482 aaKnown RBP27.96■■■□□ 2.07
CRNDE-203ENST00000557792 VAMP4O75379 141 aa27.95■■■□□ 2.06
CRNDE-203ENST00000557792 EPHX2P34913 555 aa27.95■■■□□ 2.06
CRNDE-203ENST00000557792 GPC2Q8N158 579 aa27.95■■■□□ 2.06
CRNDE-203ENST00000557792 CCER2I3L3R5 266 aa27.94■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms