RNA–Protein interactions for RNA: ENST00000557572.1

FOXN3-217, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-217ENST00000557572 KCNQ4P56696 695 aa8.03□□□□□ -1.12
FOXN3-217ENST00000557572 EIF4G2P78344 907 aaKnown RBP eCLIP8.03□□□□□ -1.12
FOXN3-217ENST00000557572 BACH1O14867 736 aa8.02□□□□□ -1.13
FOXN3-217ENST00000557572 WNT11O96014 354 aa8.02□□□□□ -1.13
FOXN3-217ENST00000557572 C8AP07357 584 aa8.02□□□□□ -1.13
FOXN3-217ENST00000557572 GRIK1P39086 918 aa8.02□□□□□ -1.13
FOXN3-217ENST00000557572 WFDC8Q8IUA0 241 aa8.02□□□□□ -1.13
FOXN3-217ENST00000557572 HSH2DQ96JZ2 352 aa8.02□□□□□ -1.13
FOXN3-217ENST00000557572 KRTAP4-5Q9BYR2 181 aa8.02□□□□□ -1.13
FOXN3-217ENST00000557572 SCHIP1Q9P0W5 487 aaPredicted RBP8.02□□□□□ -1.13
FOXN3-217ENST00000557572 CHIC2Q9UKJ5 165 aa8.02□□□□□ -1.13
FOXN3-217ENST00000557572 RAXQ9Y2V3 346 aa8.02□□□□□ -1.13
FOXN3-217ENST00000557572 SPINK2P20155 84 aa8.01□□□□□ -1.13
FOXN3-217ENST00000557572 ADGRE2Q9UHX3 823 aa8.01□□□□□ -1.13
FOXN3-217ENST00000557572 TBCELQ5QJ74 424 aa8□□□□□ -1.13
FOXN3-217ENST00000557572 INTS5Q6P9B9 1019 aaKnown RBP8□□□□□ -1.13
FOXN3-217ENST00000557572 FAM35AQ86V20 835 aa8□□□□□ -1.13
FOXN3-217ENST00000557572 ANKIB1Q9P2G1 1089 aa8□□□□□ -1.13
FOXN3-217ENST00000557572 STOML1Q9UBI4 398 aa8□□□□□ -1.13
FOXN3-217ENST00000557572 CPB1P15086 417 aa7.99□□□□□ -1.13
FOXN3-217ENST00000557572 TYRO3Q06418 890 aa7.99□□□□□ -1.13
FOXN3-217ENST00000557572 MAP7D1Q3KQU3 841 aa7.99□□□□□ -1.13
FOXN3-217ENST00000557572 SH3PXD2AQ5TCZ1 1133 aa7.99□□□□□ -1.13
FOXN3-217ENST00000557572 SERTM1A2A2V5 107 aa7.98□□□□□ -1.13
FOXN3-217ENST00000557572 SLC9A9Q8IVB4 645 aa7.98□□□□□ -1.13
FOXN3-217ENST00000557572 PLPP7Q8NBV4 271 aa7.98□□□□□ -1.13
FOXN3-217ENST00000557572 PNMA5Q96PV4 448 aa7.98□□□□□ -1.13
FOXN3-217ENST00000557572 DEAF1O75398 565 aaPredicted RBP7.97□□□□□ -1.13
FOXN3-217ENST00000557572 GRIK5Q16478 980 aa7.97□□□□□ -1.13
FOXN3-217ENST00000557572 ZDHHC13Q8IUH4 622 aa7.97□□□□□ -1.13
FOXN3-217ENST00000557572 MTMR14Q8NCE2 650 aa7.97□□□□□ -1.13
FOXN3-217ENST00000557572 DLL1O00548 723 aa7.96□□□□□ -1.14
FOXN3-217ENST00000557572 BRPF1P55201 1214 aaPredicted RBP7.96□□□□□ -1.14
FOXN3-217ENST00000557572 DTX1Q86Y01 620 aa7.96□□□□□ -1.14
FOXN3-217ENST00000557572 ZNF280CQ8ND82 737 aa7.96□□□□□ -1.14
FOXN3-217ENST00000557572 MRPL18Q9H0U6 180 aaKnown RBP7.96□□□□□ -1.14
FOXN3-217ENST00000557572 F8W735 103 aaPredicted RBP7.95□□□□□ -1.14
FOXN3-217ENST00000557572 GLB1P16278 677 aa7.95□□□□□ -1.14
FOXN3-217ENST00000557572 TMEM130Q8N3G9 435 aa7.95□□□□□ -1.14
FOXN3-217ENST00000557572 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.95□□□□□ -1.14
FOXN3-217ENST00000557572 LPIN3Q9BQK8 851 aa7.95□□□□□ -1.14
FOXN3-217ENST00000557572 EFCC1Q9HA90 598 aa7.95□□□□□ -1.14
FOXN3-217ENST00000557572 HCN4Q9Y3Q4 1203 aa7.95□□□□□ -1.14
FOXN3-217ENST00000557572 PCDHGA11Q9Y5H2 935 aa7.95□□□□□ -1.14
FOXN3-217ENST00000557572 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.95□□□□□ -1.14
FOXN3-217ENST00000557572 APBB1O00213 710 aa7.94□□□□□ -1.14
FOXN3-217ENST00000557572 PLAURQ03405 335 aa7.94□□□□□ -1.14
FOXN3-217ENST00000557572 ELMSAN1Q6PJG2 1045 aa7.94□□□□□ -1.14
FOXN3-217ENST00000557572 SUSD3Q96L08 255 aa7.94□□□□□ -1.14
FOXN3-217ENST00000557572 GOPCQ9HD26 462 aa7.94□□□□□ -1.14
FOXN3-217ENST00000557572 NFKB1P19838 968 aa7.93□□□□□ -1.14
FOXN3-217ENST00000557572 PERM1Q5SV97 790 aa7.93□□□□□ -1.14
FOXN3-217ENST00000557572 POU5F2Q8N7G0 328 aa7.93□□□□□ -1.14
FOXN3-217ENST00000557572 BANK1Q8NDB2 785 aa7.93□□□□□ -1.14
FOXN3-217ENST00000557572 ZNF358Q9NW07 568 aa7.93□□□□□ -1.14
FOXN3-217ENST00000557572 FRRS1LQ9P0K9 344 aa7.93□□□□□ -1.14
FOXN3-217ENST00000557572 NFIAQ12857 509 aa7.92□□□□□ -1.14
FOXN3-217ENST00000557572 PCSK7Q16549 785 aa7.92□□□□□ -1.14
FOXN3-217ENST00000557572 C1orf53Q5VUE5 145 aa7.92□□□□□ -1.14
FOXN3-217ENST00000557572 AGGF1Q8N302 714 aaeCLIP7.92□□□□□ -1.148e-6■□□□□ 8.6
FOXN3-217ENST00000557572 GSX2Q9BZM3 304 aa7.92□□□□□ -1.14
FOXN3-217ENST00000557572 DHX15O43143 795 aaKnown RBP7.91□□□□□ -1.14
FOXN3-217ENST00000557572 PSME1Q06323 249 aa7.91□□□□□ -1.14
FOXN3-217ENST00000557572 TNS4Q8IZW8 715 aa7.91□□□□□ -1.14
FOXN3-217ENST00000557572 PHACTR1Q9C0D0 580 aa7.91□□□□□ -1.14
FOXN3-217ENST00000557572 EPHA4P54764 986 aa7.9□□□□□ -1.14
FOXN3-217ENST00000557572 ABI1Q8IZP0 508 aa7.9□□□□□ -1.14
FOXN3-217ENST00000557572 SNRKQ9NRH2 765 aa7.9□□□□□ -1.14
FOXN3-217ENST00000557572 CCINQ13939 588 aa7.89□□□□□ -1.15
FOXN3-217ENST00000557572 FBLN7Q53RD9 439 aa7.89□□□□□ -1.15
FOXN3-217ENST00000557572 BTLAQ7Z6A9 289 aa7.89□□□□□ -1.15
FOXN3-217ENST00000557572 ASIC4Q96FT7 647 aa7.89□□□□□ -1.15
FOXN3-217ENST00000557572 UBL7Q96S82 380 aaPredicted RBP7.89□□□□□ -1.15
FOXN3-217ENST00000557572 CHMP3Q9Y3E7 222 aa7.89□□□□□ -1.15
FOXN3-217ENST00000557572 PRR19A6NJB7 356 aa7.88□□□□□ -1.15
FOXN3-217ENST00000557572 CCER1Q8TC90 406 aaPredicted RBP7.88□□□□□ -1.15
FOXN3-217ENST00000557572 KRTAP17-1Q9BYP8 105 aa7.88□□□□□ -1.15
FOXN3-217ENST00000557572 MLLT1Q03111 559 aaPredicted RBP7.87□□□□□ -1.15
FOXN3-217ENST00000557572 Q6ZS46 218 aa7.87□□□□□ -1.15
FOXN3-217ENST00000557572 TTC9Q92623 222 aa7.87□□□□□ -1.15
FOXN3-217ENST00000557572 SMG9Q9H0W8 520 aaKnown RBP7.87□□□□□ -1.15
FOXN3-217ENST00000557572 TBC1D2BQ9UPU7 963 aa7.87□□□□□ -1.15
FOXN3-217ENST00000557572 PSMA6P60900 246 aaKnown RBP7.86□□□□□ -1.15
FOXN3-217ENST00000557572 GTF2IP78347 998 aa7.86□□□□□ -1.15
FOXN3-217ENST00000557572 RNF43Q68DV7 783 aa7.86□□□□□ -1.15
FOXN3-217ENST00000557572 TRIM42Q8IWZ5 723 aa7.86□□□□□ -1.15
FOXN3-217ENST00000557572 DBNDD2Q9BQY9 259 aa7.86□□□□□ -1.15
FOXN3-217ENST00000557572 C7orf69Q9H7B7 122 aa7.86□□□□□ -1.15
FOXN3-217ENST00000557572 HMX2A2RU54 273 aa7.85□□□□□ -1.15
FOXN3-217ENST00000557572 ZBTB42B2RXF5 422 aa7.85□□□□□ -1.15
FOXN3-217ENST00000557572 VAC14Q08AM6 782 aa7.85□□□□□ -1.15
FOXN3-217ENST00000557572 EML3Q32P44 896 aa7.85□□□□□ -1.15
FOXN3-217ENST00000557572 ARMC10Q8N2F6 343 aa7.85□□□□□ -1.15
FOXN3-217ENST00000557572 HFE2Q6ZVN8 426 aa7.84□□□□□ -1.15
FOXN3-217ENST00000557572 NOD1Q9Y239 953 aa7.84□□□□□ -1.15
FOXN3-217ENST00000557572 DHX32Q7L7V1 743 aaKnown RBP7.83□□□□□ -1.16
FOXN3-217ENST00000557572 KRT25Q7Z3Z0 450 aa7.83□□□□□ -1.16
FOXN3-217ENST00000557572 ANGEL1Q9UNK9 670 aaKnown RBP7.83□□□□□ -1.16
FOXN3-217ENST00000557572 HIRAP54198 1017 aaPredicted RBP7.82□□□□□ -1.16
FOXN3-217ENST00000557572 SHKBP1Q8TBC3 707 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms