RNA–Protein interactions for RNA: ENST00000557559.1

PRKCH-225, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 504 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-225ENST00000557559 RIC1Q4ADV7 1423 aa9.85□□□□□ -0.83
PRKCH-225ENST00000557559 SNED1Q8TER0 1413 aa9.85□□□□□ -0.83
PRKCH-225ENST00000557559 BTBD11A6QL63 1104 aa9.85□□□□□ -0.83
PRKCH-225ENST00000557559 HSPA5P11021 654 aaKnown RBP9.85□□□□□ -0.83
PRKCH-225ENST00000557559 GTF2E1P29083 439 aaPredicted RBP9.85□□□□□ -0.83
PRKCH-225ENST00000557559 GRM1Q13255 1194 aa9.85□□□□□ -0.83
PRKCH-225ENST00000557559 SYNE4Q8N205 404 aa9.85□□□□□ -0.83
PRKCH-225ENST00000557559 NYXQ9GZU5 481 aa9.85□□□□□ -0.83
PRKCH-225ENST00000557559 NIP7Q9Y221 180 aaKnown RBP eCLIP9.85□□□□□ -0.83
PRKCH-225ENST00000557559 TLL2Q9Y6L7 1015 aa9.85□□□□□ -0.83
PRKCH-225ENST00000557559 COL3A1P02461 1466 aaPredicted RBP9.85□□□□□ -0.83
PRKCH-225ENST00000557559 LAMB4A4D0S4 1761 aa9.84□□□□□ -0.83
PRKCH-225ENST00000557559 BRPF1P55201 1214 aaPredicted RBP9.84□□□□□ -0.83
PRKCH-225ENST00000557559 CYP4F22Q6NT55 531 aa9.84□□□□□ -0.83
PRKCH-225ENST00000557559 IL17REQ8NFR9 667 aa9.84□□□□□ -0.83
PRKCH-225ENST00000557559 HHIPL1Q96JK4 782 aa9.84□□□□□ -0.83
PRKCH-225ENST00000557559 CFAP44Q96MT7 982 aa9.84□□□□□ -0.83
PRKCH-225ENST00000557559 ZBTB12Q9Y330 459 aaPredicted RBP9.84□□□□□ -0.83
PRKCH-225ENST00000557559 GJA3Q9Y6H8 435 aa9.84□□□□□ -0.83
PRKCH-225ENST00000557559 IBTKQ9P2D0 1353 aaPredicted RBP9.84□□□□□ -0.83
PRKCH-225ENST00000557559 U2SURPO15042 1029 aaKnown RBP9.83□□□□□ -0.84
PRKCH-225ENST00000557559 SNRPA1P09661 255 aaKnown RBP9.83□□□□□ -0.84
PRKCH-225ENST00000557559 SCNN1DP51172 638 aa9.83□□□□□ -0.84
PRKCH-225ENST00000557559 CRY2Q49AN0 593 aa9.83□□□□□ -0.84
PRKCH-225ENST00000557559 LARGE2Q8N3Y3 721 aa9.83□□□□□ -0.84
PRKCH-225ENST00000557559 RPGRQ92834 1020 aaKnown RBP9.83□□□□□ -0.84
PRKCH-225ENST00000557559 PDE4DIPQ5VU43 2346 aa9.83□□□□□ -0.84
PRKCH-225ENST00000557559 CDHR2Q9BYE9 1310 aa9.82□□□□□ -0.84
PRKCH-225ENST00000557559 TNRC18O15417 2968 aaPredicted RBP9.82□□□□□ -0.84
PRKCH-225ENST00000557559 OLFM4Q6UX06 510 aa9.82□□□□□ -0.84
PRKCH-225ENST00000557559 NIM1KQ8IY84 436 aa9.82□□□□□ -0.84
PRKCH-225ENST00000557559 MCOLN1Q9GZU1 580 aa9.82□□□□□ -0.84
PRKCH-225ENST00000557559 TMX4Q9H1E5 349 aaPredicted RBP9.82□□□□□ -0.84
PRKCH-225ENST00000557559 ADARB2Q9NS39 739 aaKnown RBP9.82□□□□□ -0.84
PRKCH-225ENST00000557559 KIF7Q2M1P5 1343 aa9.82□□□□□ -0.84
PRKCH-225ENST00000557559 COL4A5P29400 1685 aa9.81□□□□□ -0.84
PRKCH-225ENST00000557559 EPS15P42566 896 aa9.81□□□□□ -0.84
PRKCH-225ENST00000557559 CST9Q5W186 159 aa9.81□□□□□ -0.84
PRKCH-225ENST00000557559 SAPCD2Q86UD0 394 aa9.81□□□□□ -0.84
PRKCH-225ENST00000557559 RTF1Q92541 710 aaKnown RBP9.81□□□□□ -0.84
PRKCH-225ENST00000557559 VPS33BQ9H267 617 aa9.81□□□□□ -0.84
PRKCH-225ENST00000557559 USP16Q9Y5T5 823 aa9.81□□□□□ -0.84
PRKCH-225ENST00000557559 ABCC12Q96J65 1359 aa9.8□□□□□ -0.84
PRKCH-225ENST00000557559 NPC1L1Q9UHC9 1359 aa9.8□□□□□ -0.84
PRKCH-225ENST00000557559 FAM177BA6PVY3 158 aa9.8□□□□□ -0.84
PRKCH-225ENST00000557559 HOXA10P31260 410 aaPredicted RBP9.8□□□□□ -0.84
PRKCH-225ENST00000557559 PIP4K2AP48426 406 aaPredicted RBP9.8□□□□□ -0.84
PRKCH-225ENST00000557559 NOGQ13253 232 aa9.8□□□□□ -0.84
PRKCH-225ENST00000557559 GPRC5DQ9NZD1 345 aa9.8□□□□□ -0.84
PRKCH-225ENST00000557559 TSKSQ9UJT2 592 aa9.8□□□□□ -0.84
PRKCH-225ENST00000557559 ERVV-1B6SEH8 477 aa9.79□□□□□ -0.84
PRKCH-225ENST00000557559 TRAF5O00463 557 aa9.79□□□□□ -0.84
PRKCH-225ENST00000557559 PPEF1O14829 653 aaPredicted RBP9.79□□□□□ -0.84
PRKCH-225ENST00000557559 PPIP5K2O43314 1243 aa9.79□□□□□ -0.84
PRKCH-225ENST00000557559 AOC2O75106 756 aa9.79□□□□□ -0.84
PRKCH-225ENST00000557559 CELF2O95319 508 aaKnown RBP9.79□□□□□ -0.84
PRKCH-225ENST00000557559 DGKZQ13574 1117 aa9.79□□□□□ -0.84
PRKCH-225ENST00000557559 SUPT20HQ8NEM7 779 aa9.79□□□□□ -0.84
PRKCH-225ENST00000557559 ZC3H15Q8WU90 426 aaKnown RBP9.79□□□□□ -0.84
PRKCH-225ENST00000557559 RBM17Q96I25 401 aaKnown RBP9.79□□□□□ -0.84
PRKCH-225ENST00000557559 CRAMP1Q96RY5 1269 aa9.79□□□□□ -0.84
PRKCH-225ENST00000557559 NBPF26B4DH59 902 aa9.78□□□□□ -0.84
PRKCH-225ENST00000557559 KCNQ3O43525 872 aa9.78□□□□□ -0.84
PRKCH-225ENST00000557559 PRKAR2BP31323 418 aa9.78□□□□□ -0.84
PRKCH-225ENST00000557559 CC2D1BQ5T0F9 858 aaKnown RBP9.78□□□□□ -0.84
PRKCH-225ENST00000557559 NBPF10Q6P3W6 841 aaKnown RBP9.78□□□□□ -0.84
PRKCH-225ENST00000557559 KIF6Q6ZMV9 814 aa9.78□□□□□ -0.84
PRKCH-225ENST00000557559 NBPF15Q8N660 670 aa9.78□□□□□ -0.84
PRKCH-225ENST00000557559 CFAP53Q96M91 514 aa9.78□□□□□ -0.84
PRKCH-225ENST00000557559 PRAMEF22A3QJZ6 481 aa9.77□□□□□ -0.85
PRKCH-225ENST00000557559 HTATSF1O43719 755 aaKnown RBP9.77□□□□□ -0.85
PRKCH-225ENST00000557559 FMR1Q06787 632 aaKnown RBP eCLIP9.77□□□□□ -0.85
PRKCH-225ENST00000557559 TRIM26Q12899 539 aaPredicted RBP9.77□□□□□ -0.85
PRKCH-225ENST00000557559 HLFQ16534 295 aa9.77□□□□□ -0.85
PRKCH-225ENST00000557559 SAGE1Q9NXZ1 904 aa9.77□□□□□ -0.85
PRKCH-225ENST00000557559 NUDCQ9Y266 331 aa9.77□□□□□ -0.85
PRKCH-225ENST00000557559 MAP3K15Q6ZN16 1313 aa9.77□□□□□ -0.85
PRKCH-225ENST00000557559 NUP98P52948 1817 aa9.77□□□□□ -0.85
PRKCH-225ENST00000557559 CASP8AP2Q9UKL3 1982 aa9.76□□□□□ -0.85
PRKCH-225ENST00000557559 TNIP1Q15025 636 aa9.76□□□□□ -0.85
PRKCH-225ENST00000557559 AOC3Q16853 763 aa9.76□□□□□ -0.85
PRKCH-225ENST00000557559 CIAPIN1Q6FI81 312 aa9.76□□□□□ -0.85
PRKCH-225ENST00000557559 CDC37L1Q7L3B6 337 aa9.76□□□□□ -0.85
PRKCH-225ENST00000557559 NUTM1Q86Y26 1132 aa9.76□□□□□ -0.85
PRKCH-225ENST00000557559 BCL2L13Q9BXK5 485 aa9.76□□□□□ -0.85
PRKCH-225ENST00000557559 RSPH6AQ9H0K4 717 aa9.76□□□□□ -0.85
PRKCH-225ENST00000557559 ZNF408Q9H9D4 720 aa9.76□□□□□ -0.85
PRKCH-225ENST00000557559 PGAP2Q9UHJ9 254 aa9.76□□□□□ -0.85
PRKCH-225ENST00000557559 ZNRF3Q9ULT6 936 aa9.76□□□□□ -0.85
PRKCH-225ENST00000557559 PER1O15534 1290 aaPredicted RBP9.75□□□□□ -0.85
PRKCH-225ENST00000557559 GMPSP49915 693 aaPredicted RBP9.75□□□□□ -0.85
PRKCH-225ENST00000557559 HUNKP57058 714 aa9.75□□□□□ -0.85
PRKCH-225ENST00000557559 PARP10Q53GL7 1025 aa9.75□□□□□ -0.85
PRKCH-225ENST00000557559 PRPF38BQ5VTL8 546 aaKnown RBP9.75□□□□□ -0.85
PRKCH-225ENST00000557559 PPP1R42Q7Z4L9 355 aa9.75□□□□□ -0.85
PRKCH-225ENST00000557559 PHACTR3Q96KR7 559 aa9.75□□□□□ -0.85
PRKCH-225ENST00000557559 GLIS2Q9BZE0 524 aaPredicted RBP9.75□□□□□ -0.85
PRKCH-225ENST00000557559 ATP6V0A2Q9Y487 856 aa9.75□□□□□ -0.85
PRKCH-225ENST00000557559 KDM3BQ7LBC6 1761 aa9.75□□□□□ -0.85
PRKCH-225ENST00000557559 CXCL9Q07325 125 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms