RNA–Protein interactions for RNA: ENST00000557555.1

ITGA7-220, Transcript of integrin subunit alpha 7, humanhuman

TSL 5

Gene ITGA7, Length 817 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA7-220ENST00000557555 NLRP10Q86W26 655 aa18.83■□□□□ 0.6
ITGA7-220ENST00000557555 TSPYL6Q8N831 410 aa18.83■□□□□ 0.6
ITGA7-220ENST00000557555 CACNA1SQ13698 1873 aa18.82■□□□□ 0.6
ITGA7-220ENST00000557555 ALDH1B1P30837 517 aa18.82■□□□□ 0.6
ITGA7-220ENST00000557555 PRELPP51888 382 aa18.82■□□□□ 0.6
ITGA7-220ENST00000557555 SOGA3Q5TF21 947 aa18.82■□□□□ 0.6
ITGA7-220ENST00000557555 CCDC30Q5VVM6 783 aa18.82■□□□□ 0.6
ITGA7-220ENST00000557555 WDR63Q8IWG1 891 aa18.82■□□□□ 0.6
ITGA7-220ENST00000557555 C7orf43Q8WVR3 580 aa18.82■□□□□ 0.6
ITGA7-220ENST00000557555 RNF123Q5XPI4 1314 aa18.81■□□□□ 0.6
ITGA7-220ENST00000557555 C1QTNF8P60827 252 aa18.8■□□□□ 0.6
ITGA7-220ENST00000557555 SLC10A5Q5PT55 438 aa18.8■□□□□ 0.6
ITGA7-220ENST00000557555 PHAXQ9H814 394 aaKnown RBP18.8■□□□□ 0.6
ITGA7-220ENST00000557555 FER1L6Q2WGJ9 1857 aa18.8■□□□□ 0.6
ITGA7-220ENST00000557555 LTBP3Q9NS15 1303 aa18.79■□□□□ 0.6
ITGA7-220ENST00000557555 HOXA10P31260 410 aaPredicted RBP18.79■□□□□ 0.6
ITGA7-220ENST00000557555 RPGRQ92834 1020 aaKnown RBP18.79■□□□□ 0.6
ITGA7-220ENST00000557555 ISCA1Q9BUE6 129 aa18.79■□□□□ 0.6
ITGA7-220ENST00000557555 TRMT112Q9UI30 125 aaKnown RBP18.79■□□□□ 0.6
ITGA7-220ENST00000557555 FANCIQ9NVI1 1328 aa18.78■□□□□ 0.6
ITGA7-220ENST00000557555 ZC3H4Q9UPT8 1303 aaKnown RBP18.78■□□□□ 0.6
ITGA7-220ENST00000557555 GOLGA2Q08379 1002 aa18.78■□□□□ 0.6
ITGA7-220ENST00000557555 TWISTNBQ3B726 338 aaPredicted RBP18.78■□□□□ 0.6
ITGA7-220ENST00000557555 CCDC93Q567U6 631 aa18.78■□□□□ 0.6
ITGA7-220ENST00000557555 C3orf67Q6ZVT6 689 aa18.78■□□□□ 0.6
ITGA7-220ENST00000557555 NLRP3Q96P20 1036 aa18.78■□□□□ 0.6
ITGA7-220ENST00000557555 TAOK3Q9H2K8 898 aa18.78■□□□□ 0.6
ITGA7-220ENST00000557555 RIC3Q7Z5B4 369 aa18.77■□□□□ 0.6
ITGA7-220ENST00000557555 SH3TC1Q8TE82 1336 aa18.76■□□□□ 0.59
ITGA7-220ENST00000557555 ATP5J2-PTCD1G3V325 749 aa18.76■□□□□ 0.59
ITGA7-220ENST00000557555 KIF3CO14782 793 aa18.76■□□□□ 0.59
ITGA7-220ENST00000557555 TRIM28Q13263 835 aaKnown RBP18.76■□□□□ 0.59
ITGA7-220ENST00000557555 SYNE4Q8N205 404 aa18.76■□□□□ 0.59
ITGA7-220ENST00000557555 RBM17Q96I25 401 aaKnown RBP18.76■□□□□ 0.59
ITGA7-220ENST00000557555 CRAMP1Q96RY5 1269 aa18.76■□□□□ 0.59
ITGA7-220ENST00000557555 CCDC88AQ3V6T2 1871 aa18.75■□□□□ 0.59
ITGA7-220ENST00000557555 HCLS1P14317 486 aaPredicted RBP18.75■□□□□ 0.59
ITGA7-220ENST00000557555 OLFM4Q6UX06 510 aa18.75■□□□□ 0.59
ITGA7-220ENST00000557555 STK31Q9BXU1 1019 aa18.75■□□□□ 0.59
ITGA7-220ENST00000557555 KDM2BQ8NHM5 1336 aa18.74■□□□□ 0.59
ITGA7-220ENST00000557555 TCERG1O14776 1098 aaKnown RBP18.74■□□□□ 0.59
ITGA7-220ENST00000557555 DDX58O95786 925 aaKnown RBP18.74■□□□□ 0.59
ITGA7-220ENST00000557555 RTKN2Q8IZC4 609 aa18.74■□□□□ 0.59
ITGA7-220ENST00000557555 ZNF428Q96B54 188 aa18.74■□□□□ 0.59
ITGA7-220ENST00000557555 NMRK2Q9NPI5 230 aa18.74■□□□□ 0.59
ITGA7-220ENST00000557555 SPINK5Q9NQ38 1064 aaPredicted RBP18.74■□□□□ 0.59
ITGA7-220ENST00000557555 TIAM2Q8IVF5 1701 aa18.74■□□□□ 0.59
ITGA7-220ENST00000557555 FKBP4Q02790 459 aaKnown RBP eCLIP18.73■□□□□ 0.59
ITGA7-220ENST00000557555 EXOSC9Q06265 439 aaKnown RBP18.73■□□□□ 0.59
ITGA7-220ENST00000557555 CC2D2BQ6DHV5 1058 aa18.72■□□□□ 0.59
ITGA7-220ENST00000557555 FAM89AQ96GI7 184 aa18.72■□□□□ 0.59
ITGA7-220ENST00000557555 MYD88Q99836 296 aa18.72■□□□□ 0.59
ITGA7-220ENST00000557555 METTL22Q9BUU2 404 aaPredicted RBP18.72■□□□□ 0.59
ITGA7-220ENST00000557555 MYH16Q9H6N6 1097 aa18.72■□□□□ 0.59
ITGA7-220ENST00000557555 DICER1Q9UPY3 1922 aaKnown RBP18.72■□□□□ 0.59
ITGA7-220ENST00000557555 ZNF521Q96K83 1311 aa18.72■□□□□ 0.59
ITGA7-220ENST00000557555 LAMB2P55268 1798 aa18.71■□□□□ 0.59
ITGA7-220ENST00000557555 GLTPD2A6NH11 291 aa18.71■□□□□ 0.59
ITGA7-220ENST00000557555 CCER2I3L3R5 266 aa18.71■□□□□ 0.59
ITGA7-220ENST00000557555 PPEF1O14829 653 aaPredicted RBP18.71■□□□□ 0.59
ITGA7-220ENST00000557555 VAMP4O75379 141 aa18.71■□□□□ 0.59
ITGA7-220ENST00000557555 SLC4A2P04920 1241 aa18.71■□□□□ 0.59
ITGA7-220ENST00000557555 KSR2Q6VAB6 950 aa18.71■□□□□ 0.59
ITGA7-220ENST00000557555 MAP3K2Q9Y2U5 619 aa18.71■□□□□ 0.59
ITGA7-220ENST00000557555 SNED1Q8TER0 1413 aa18.71■□□□□ 0.59
ITGA7-220ENST00000557555 ABCC4O15439 1325 aa18.71■□□□□ 0.59
ITGA7-220ENST00000557555 G2E3Q7L622 706 aa18.7■□□□□ 0.58
ITGA7-220ENST00000557555 CCDC191Q8NCU4 936 aa18.7■□□□□ 0.58
ITGA7-220ENST00000557555 ZNF277Q9NRM2 450 aaPredicted RBP18.7■□□□□ 0.58
ITGA7-220ENST00000557555 DDX60Q8IY21 1712 aaKnown RBP18.69■□□□□ 0.58
ITGA7-220ENST00000557555 PI4KAP2A4QPH2 592 aa18.69■□□□□ 0.58
ITGA7-220ENST00000557555 GRIPAP1Q4V328 841 aa18.69■□□□□ 0.58
ITGA7-220ENST00000557555 RTL5Q5HYW3 569 aaPredicted RBP18.69■□□□□ 0.58
ITGA7-220ENST00000557555 PI4KAP1Q8N8J0 262 aa18.69■□□□□ 0.58
ITGA7-220ENST00000557555 ZBTB38Q8NAP3 1195 aaPredicted RBP18.69■□□□□ 0.58
ITGA7-220ENST00000557555 PSMD1Q99460 953 aa18.69■□□□□ 0.58
ITGA7-220ENST00000557555 RRAGCQ9HB90 399 aa18.69■□□□□ 0.58
ITGA7-220ENST00000557555 BBOX1O75936 387 aa18.68■□□□□ 0.58
ITGA7-220ENST00000557555 DPY19L2Q6NUT2 758 aa18.68■□□□□ 0.58
ITGA7-220ENST00000557555 DDX46Q7L014 1031 aaKnown RBP18.68■□□□□ 0.58
ITGA7-220ENST00000557555 CWC25Q9NXE8 425 aaPredicted RBP18.68■□□□□ 0.58
ITGA7-220ENST00000557555 IRS4O14654 1257 aaPredicted RBP18.67■□□□□ 0.58
ITGA7-220ENST00000557555 TOMM70O94826 608 aa18.67■□□□□ 0.58
ITGA7-220ENST00000557555 FLIIQ13045 1269 aa18.67■□□□□ 0.58
ITGA7-220ENST00000557555 SF3B3Q15393 1217 aaKnown RBP18.67■□□□□ 0.58
ITGA7-220ENST00000557555 SLC51AQ86UW1 340 aa18.67■□□□□ 0.58
ITGA7-220ENST00000557555 ATP6V0A2Q9Y487 856 aa18.67■□□□□ 0.58
ITGA7-220ENST00000557555 PCCAP05165 728 aaPredicted RBP18.66■□□□□ 0.58
ITGA7-220ENST00000557555 IARSP41252 1262 aaKnown RBP18.66■□□□□ 0.58
ITGA7-220ENST00000557555 GRAPQ13588 217 aa18.66■□□□□ 0.58
ITGA7-220ENST00000557555 GRAPLQ8TC17 118 aaPredicted RBP18.66■□□□□ 0.58
ITGA7-220ENST00000557555 TMX4Q9H1E5 349 aaPredicted RBP18.66■□□□□ 0.58
ITGA7-220ENST00000557555 IGKV5-2P06315 115 aa18.65■□□□□ 0.58
ITGA7-220ENST00000557555 HSP90B1P14625 803 aaKnown RBP18.65■□□□□ 0.58
ITGA7-220ENST00000557555 NEXNQ0ZGT2 675 aa18.65■□□□□ 0.58
ITGA7-220ENST00000557555 SP8Q8IXZ3 490 aa18.65■□□□□ 0.58
ITGA7-220ENST00000557555 C16orf71Q8IYS4 520 aaPredicted RBP18.65■□□□□ 0.58
ITGA7-220ENST00000557555 VEGFAP15692 232 aaPredicted RBP18.64■□□□□ 0.57
ITGA7-220ENST00000557555 CACNA1FO60840 1977 aa18.64■□□□□ 0.57
ITGA7-220ENST00000557555 FKBP5Q13451 457 aaPredicted RBP18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms