RNA–Protein interactions for RNA: ENST00000557511.5

PSEN1-223, Transcript of presenilin 1, humanhuman

TSL 5 BASIC

Gene PSEN1, Length 1,230 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-223ENST00000557511 GTF2E1P29083 439 aaPredicted RBP10.75□□□□□ -0.69
PSEN1-223ENST00000557511 TM4SF1P30408 202 aa10.75□□□□□ -0.69
PSEN1-223ENST00000557511 TGFB2P61812 414 aa10.75□□□□□ -0.69
PSEN1-223ENST00000557511 DUSP27Q5VZP5 1158 aa10.75□□□□□ -0.69
PSEN1-223ENST00000557511 WDR63Q8IWG1 891 aa10.75□□□□□ -0.69
PSEN1-223ENST00000557511 IL16Q14005 1332 aa10.75□□□□□ -0.69
PSEN1-223ENST00000557511 KDM3BQ7LBC6 1761 aa10.75□□□□□ -0.69
PSEN1-223ENST00000557511 NBPF26B4DH59 902 aa10.74□□□□□ -0.69
PSEN1-223ENST00000557511 GRIN3BO60391 1043 aa10.74□□□□□ -0.69
PSEN1-223ENST00000557511 CAMTA2O94983 1202 aa10.74□□□□□ -0.69
PSEN1-223ENST00000557511 SERPINB2P05120 415 aa10.74□□□□□ -0.69
PSEN1-223ENST00000557511 ZNF853P0CG23 659 aa10.74□□□□□ -0.69
PSEN1-223ENST00000557511 ST5P78524 1137 aa10.74□□□□□ -0.69
PSEN1-223ENST00000557511 NFIXQ14938 502 aa10.74□□□□□ -0.69
PSEN1-223ENST00000557511 NBPF10Q6P3W6 841 aaKnown RBP10.74□□□□□ -0.69
PSEN1-223ENST00000557511 NBPF15Q8N660 670 aa10.74□□□□□ -0.69
PSEN1-223ENST00000557511 MYH16Q9H6N6 1097 aa10.74□□□□□ -0.69
PSEN1-223ENST00000557511 DBF4Q9UBU7 674 aaPredicted RBP10.74□□□□□ -0.69
PSEN1-223ENST00000557511 CARMIL3Q8ND23 1372 aa10.74□□□□□ -0.69
PSEN1-223ENST00000557511 MYH14Q7Z406 1995 aaKnown RBP10.74□□□□□ -0.69
PSEN1-223ENST00000557511 ERVV-1B6SEH8 477 aa10.73□□□□□ -0.69
PSEN1-223ENST00000557511 POLRMTO00411 1230 aaKnown RBP10.73□□□□□ -0.69
PSEN1-223ENST00000557511 ELL2O00472 640 aaPredicted RBP10.73□□□□□ -0.69
PSEN1-223ENST00000557511 AIMP1Q12904 312 aaKnown RBP10.73□□□□□ -0.69
PSEN1-223ENST00000557511 HSP90AB3PQ58FF7 597 aa10.73□□□□□ -0.69
PSEN1-223ENST00000557511 CCDC30Q5VVM6 783 aa10.73□□□□□ -0.69
PSEN1-223ENST00000557511 TBC1D9BQ66K14 1250 aa10.73□□□□□ -0.69
PSEN1-223ENST00000557511 NLGN2Q8NFZ4 835 aa10.73□□□□□ -0.69
PSEN1-223ENST00000557511 STK31Q9BXU1 1019 aa10.73□□□□□ -0.69
PSEN1-223ENST00000557511 DDX21Q9NR30 783 aaKnown RBP eCLIP10.73□□□□□ -0.69
PSEN1-223ENST00000557511 DDR1Q08345 913 aa10.72□□□□□ -0.69
PSEN1-223ENST00000557511 TPTE2Q6XPS3 522 aa10.72□□□□□ -0.69
PSEN1-223ENST00000557511 NBPF5PQ86XG9 351 aaPredicted RBP10.72□□□□□ -0.69
PSEN1-223ENST00000557511 CNBD1Q8NA66 436 aa10.72□□□□□ -0.69
PSEN1-223ENST00000557511 BBXQ8WY36 941 aaPredicted RBP10.72□□□□□ -0.69
PSEN1-223ENST00000557511 NYXQ9GZU5 481 aa10.72□□□□□ -0.69
PSEN1-223ENST00000557511 ZBTB3Q9H5J0 574 aa10.72□□□□□ -0.69
PSEN1-223ENST00000557511 BCL2L12Q9HB09 334 aa10.72□□□□□ -0.69
PSEN1-223ENST00000557511 HYPKQ9NX55 129 aa10.72□□□□□ -0.69
PSEN1-223ENST00000557511 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.72□□□□□ -0.69
PSEN1-223ENST00000557511 PDZRN3Q9UPQ7 1066 aa10.72□□□□□ -0.69
PSEN1-223ENST00000557511 NIP7Q9Y221 180 aaKnown RBP eCLIP10.72□□□□□ -0.69
PSEN1-223ENST00000557511 MAP3K15Q6ZN16 1313 aa10.72□□□□□ -0.69
PSEN1-223ENST00000557511 C4AP0C0L4 1744 aa10.72□□□□□ -0.69
PSEN1-223ENST00000557511 LAMB4A4D0S4 1761 aa10.71□□□□□ -0.69
PSEN1-223ENST00000557511 PDE6BP35913 854 aa10.71□□□□□ -0.69
PSEN1-223ENST00000557511 COL24A1Q17RW2 1714 aa10.71□□□□□ -0.69
PSEN1-223ENST00000557511 KRT24Q2M2I5 525 aa10.71□□□□□ -0.69
PSEN1-223ENST00000557511 SLAIN1Q8ND83 568 aa10.71□□□□□ -0.69
PSEN1-223ENST00000557511 TSR2Q969E8 191 aaKnown RBP10.71□□□□□ -0.69
PSEN1-223ENST00000557511 CHPF2Q9P2E5 772 aa10.71□□□□□ -0.69
PSEN1-223ENST00000557511 C10orf71Q711Q0 1435 aa10.7□□□□□ -0.7
PSEN1-223ENST00000557511 FAM177BA6PVY3 158 aa10.7□□□□□ -0.7
PSEN1-223ENST00000557511 H0YIN7 160 aa10.7□□□□□ -0.7
PSEN1-223ENST00000557511 DDX58O95786 925 aaKnown RBP10.7□□□□□ -0.7
PSEN1-223ENST00000557511 TWISTNBQ3B726 338 aaPredicted RBP10.7□□□□□ -0.7
PSEN1-223ENST00000557511 TTLL7Q6ZT98 887 aa10.7□□□□□ -0.7
PSEN1-223ENST00000557511 COPS6Q7L5N1 327 aa10.7□□□□□ -0.7
PSEN1-223ENST00000557511 PPP1R42Q7Z4L9 355 aa10.7□□□□□ -0.7
PSEN1-223ENST00000557511 XAGE3Q8WTP9 111 aa10.7□□□□□ -0.7
PSEN1-223ENST00000557511 PIM2Q9P1W9 311 aa10.7□□□□□ -0.7
PSEN1-223ENST00000557511 SRCAPQ6ZRS2 3230 aa10.69□□□□□ -0.7
PSEN1-223ENST00000557511 A0A0G2JLW4 131 aa10.69□□□□□ -0.7
PSEN1-223ENST00000557511 ANXA1P04083 346 aa10.69□□□□□ -0.7
PSEN1-223ENST00000557511 DPEP1P16444 411 aa10.69□□□□□ -0.7
PSEN1-223ENST00000557511 PARP10Q53GL7 1025 aa10.69□□□□□ -0.7
PSEN1-223ENST00000557511 GIGYF2Q6Y7W6 1299 aaKnown RBP10.69□□□□□ -0.7
PSEN1-223ENST00000557511 MICALL2Q8IY33 904 aa10.69□□□□□ -0.7
PSEN1-223ENST00000557511 C8orf58Q8NAV2 365 aa10.69□□□□□ -0.7
PSEN1-223ENST00000557511 BRIP1Q9BX63 1249 aa10.69□□□□□ -0.7
PSEN1-223ENST00000557511 BCS1LQ9Y276 419 aa10.69□□□□□ -0.7
PSEN1-223ENST00000557511 FANCIQ9NVI1 1328 aa10.68□□□□□ -0.7
PSEN1-223ENST00000557511 E9PSI1 815 aa10.68□□□□□ -0.7
PSEN1-223ENST00000557511 GPTP24298 496 aa10.68□□□□□ -0.7
PSEN1-223ENST00000557511 PDIA6Q15084 440 aa10.68□□□□□ -0.7
PSEN1-223ENST00000557511 HLFQ16534 295 aa10.68□□□□□ -0.7
PSEN1-223ENST00000557511 DALRD3Q5D0E6 543 aaKnown RBP10.68□□□□□ -0.7
PSEN1-223ENST00000557511 PRR5LQ6MZQ0 368 aa10.68□□□□□ -0.7
PSEN1-223ENST00000557511 ANKRD13DQ6ZTN6 518 aa10.68□□□□□ -0.7
PSEN1-223ENST00000557511 RIC3Q7Z5B4 369 aa10.68□□□□□ -0.7
PSEN1-223ENST00000557511 C2CD5Q86YS7 1000 aa10.68□□□□□ -0.7
PSEN1-223ENST00000557511 PLBD2Q8NHP8 589 aa10.68□□□□□ -0.7
PSEN1-223ENST00000557511 WWC3Q9ULE0 1092 aa10.68□□□□□ -0.7
PSEN1-223ENST00000557511 SCN7AQ01118 1682 aa10.67□□□□□ -0.7
PSEN1-223ENST00000557511 YY1P25490 414 aa10.67□□□□□ -0.7
PSEN1-223ENST00000557511 PROSER3Q2NL68 480 aa10.67□□□□□ -0.7
PSEN1-223ENST00000557511 ZNF622Q969S3 477 aaKnown RBP eCLIP10.67□□□□□ -0.7
PSEN1-223ENST00000557511 CHRNA5P30532 468 aa10.66□□□□□ -0.7
PSEN1-223ENST00000557511 EXOSC9Q06265 439 aaKnown RBP10.66□□□□□ -0.7
PSEN1-223ENST00000557511 TTLL6Q8N841 843 aa10.66□□□□□ -0.7
PSEN1-223ENST00000557511 UTP14AQ9BVJ6 771 aaKnown RBP10.66□□□□□ -0.7
PSEN1-223ENST00000557511 PXDNLA1KZ92 1463 aa10.66□□□□□ -0.7
PSEN1-223ENST00000557511 ATP10DQ9P241 1426 aa10.66□□□□□ -0.7
PSEN1-223ENST00000557511 PPP1R37O75864 691 aa10.65□□□□□ -0.7
PSEN1-223ENST00000557511 HSP90B1P14625 803 aaKnown RBP10.65□□□□□ -0.7
PSEN1-223ENST00000557511 NEXNQ0ZGT2 675 aa10.65□□□□□ -0.7
PSEN1-223ENST00000557511 TCIRG1Q13488 830 aa10.65□□□□□ -0.7
PSEN1-223ENST00000557511 ARHGAP27Q6ZUM4 889 aa10.65□□□□□ -0.7
PSEN1-223ENST00000557511 ZNF34Q8IZ26 560 aa10.65□□□□□ -0.7
PSEN1-223ENST00000557511 CCDC24Q8N4L8 307 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms