RNA–Protein interactions for RNA: ENST00000557293.5

PSEN1-221, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-221ENST00000557293 ECE1P42892 770 aa16.89■□□□□ 0.29
PSEN1-221ENST00000557293 RSPH6AQ9H0K4 717 aa16.89■□□□□ 0.29
PSEN1-221ENST00000557293 HOXA10P31260 410 aaPredicted RBP16.88■□□□□ 0.29
PSEN1-221ENST00000557293 EIF6P56537 245 aaKnown RBP16.88■□□□□ 0.29
PSEN1-221ENST00000557293 CC2D2BQ6DHV5 1058 aa16.88■□□□□ 0.29
PSEN1-221ENST00000557293 USP50Q70EL3 339 aaPredicted RBP16.88■□□□□ 0.29
PSEN1-221ENST00000557293 ABCC12Q96J65 1359 aa16.88■□□□□ 0.29
PSEN1-221ENST00000557293 PRKAR2BP31323 418 aa16.87■□□□□ 0.29
PSEN1-221ENST00000557293 MAP2K2P36507 400 aa16.87■□□□□ 0.29
PSEN1-221ENST00000557293 MCM10Q7L590 875 aa16.87■□□□□ 0.29
PSEN1-221ENST00000557293 NUTM1Q86Y26 1132 aa16.87■□□□□ 0.29
PSEN1-221ENST00000557293 GRM1Q13255 1194 aa16.86■□□□□ 0.29
PSEN1-221ENST00000557293 PAXIP1Q6ZW49 1069 aaPredicted RBP16.86■□□□□ 0.29
PSEN1-221ENST00000557293 MCOLN1Q9GZU1 580 aa16.86■□□□□ 0.29
PSEN1-221ENST00000557293 PCDH10Q9P2E7 1040 aa16.86■□□□□ 0.29
PSEN1-221ENST00000557293 TRPM7Q96QT4 1865 aa16.85■□□□□ 0.29
PSEN1-221ENST00000557293 LMOD1P29536 600 aaPredicted RBP16.85■□□□□ 0.29
PSEN1-221ENST00000557293 DCTN1Q14203 1278 aa16.85■□□□□ 0.29
PSEN1-221ENST00000557293 SAPCD2Q86UD0 394 aa16.85■□□□□ 0.29
PSEN1-221ENST00000557293 LARGE2Q8N3Y3 721 aa16.85■□□□□ 0.29
PSEN1-221ENST00000557293 BEGAINQ9BUH8 593 aa16.85■□□□□ 0.29
PSEN1-221ENST00000557293 PGAP2Q9UHJ9 254 aa16.85■□□□□ 0.29
PSEN1-221ENST00000557293 GTF2E1P29083 439 aaPredicted RBP16.84■□□□□ 0.29
PSEN1-221ENST00000557293 C3orf67Q6ZVT6 689 aa16.84■□□□□ 0.29
PSEN1-221ENST00000557293 NPC1L1Q9UHC9 1359 aa16.84■□□□□ 0.29
PSEN1-221ENST00000557293 ERVV-1B6SEH8 477 aa16.83■□□□□ 0.28
PSEN1-221ENST00000557293 CRAMP1Q96RY5 1269 aa16.83■□□□□ 0.28
PSEN1-221ENST00000557293 PCGF6Q9BYE7 350 aa16.83■□□□□ 0.28
PSEN1-221ENST00000557293 GPRC5DQ9NZD1 345 aa16.83■□□□□ 0.28
PSEN1-221ENST00000557293 UBN2Q6ZU65 1347 aa16.82■□□□□ 0.28
PSEN1-221ENST00000557293 HIRAP54198 1017 aaPredicted RBP16.82■□□□□ 0.28
PSEN1-221ENST00000557293 CXCL9Q07325 125 aa16.82■□□□□ 0.28
PSEN1-221ENST00000557293 GRIPAP1Q4V328 841 aa16.82■□□□□ 0.28
PSEN1-221ENST00000557293 SUSD4Q5VX71 490 aa16.82■□□□□ 0.28
PSEN1-221ENST00000557293 TTLL7Q6ZT98 887 aa16.82■□□□□ 0.28
PSEN1-221ENST00000557293 HHIPL1Q96JK4 782 aa16.82■□□□□ 0.28
PSEN1-221ENST00000557293 ZIC5Q96T25 663 aa16.82■□□□□ 0.28
PSEN1-221ENST00000557293 NYXQ9GZU5 481 aa16.82■□□□□ 0.28
PSEN1-221ENST00000557293 ADARB2Q9NS39 739 aaKnown RBP16.82■□□□□ 0.28
PSEN1-221ENST00000557293 MIS18AQ9NYP9 233 aa16.82■□□□□ 0.28
PSEN1-221ENST00000557293 CASP8AP2Q9UKL3 1982 aa16.82■□□□□ 0.28
PSEN1-221ENST00000557293 RIC1Q4ADV7 1423 aa16.81■□□□□ 0.28
PSEN1-221ENST00000557293 TCERG1O14776 1098 aaKnown RBP16.81■□□□□ 0.28
PSEN1-221ENST00000557293 CELF2O95319 508 aaKnown RBP16.81■□□□□ 0.28
PSEN1-221ENST00000557293 CNGB1Q14028 1251 aaPredicted RBP16.81■□□□□ 0.28
PSEN1-221ENST00000557293 TAF7Q15545 349 aaPredicted RBP16.81■□□□□ 0.28
PSEN1-221ENST00000557293 NGEFQ8N5V2 710 aa16.81■□□□□ 0.28
PSEN1-221ENST00000557293 GLIS2Q9BZE0 524 aaPredicted RBP16.81■□□□□ 0.28
PSEN1-221ENST00000557293 MAP3K15Q6ZN16 1313 aa16.8■□□□□ 0.28
PSEN1-221ENST00000557293 ZNF34Q8IZ26 560 aa16.8■□□□□ 0.28
PSEN1-221ENST00000557293 RPGRQ92834 1020 aaKnown RBP16.8■□□□□ 0.28
PSEN1-221ENST00000557293 PPEF1O14829 653 aaPredicted RBP16.79■□□□□ 0.28
PSEN1-221ENST00000557293 CA12O43570 354 aa16.79■□□□□ 0.28
PSEN1-221ENST00000557293 HTATSF1O43719 755 aaKnown RBP16.79■□□□□ 0.28
PSEN1-221ENST00000557293 GPTP24298 496 aa16.79■□□□□ 0.28
PSEN1-221ENST00000557293 BRPF1P55201 1214 aaPredicted RBP16.79■□□□□ 0.28
PSEN1-221ENST00000557293 AOC3Q16853 763 aa16.79■□□□□ 0.28
PSEN1-221ENST00000557293 NIM1KQ8IY84 436 aa16.79■□□□□ 0.28
PSEN1-221ENST00000557293 RTF1Q92541 710 aaKnown RBP16.79■□□□□ 0.28
PSEN1-221ENST00000557293 RBM17Q96I25 401 aaKnown RBP16.79■□□□□ 0.28
PSEN1-221ENST00000557293 NUP98P52948 1817 aa16.79■□□□□ 0.28
PSEN1-221ENST00000557293 PPIP5K2O43314 1243 aa16.78■□□□□ 0.28
PSEN1-221ENST00000557293 NTSR2O95665 410 aa16.78■□□□□ 0.28
PSEN1-221ENST00000557293 GMPSP49915 693 aaPredicted RBP16.78■□□□□ 0.28
PSEN1-221ENST00000557293 DGKZQ13574 1117 aa16.78■□□□□ 0.28
PSEN1-221ENST00000557293 CIAPIN1Q6FI81 312 aa16.78■□□□□ 0.28
PSEN1-221ENST00000557293 RTFDC1Q9BY42 306 aaPredicted RBP16.78■□□□□ 0.28
PSEN1-221ENST00000557293 VPS33BQ9H267 617 aa16.78■□□□□ 0.28
PSEN1-221ENST00000557293 ZNRF3Q9ULT6 936 aa16.78■□□□□ 0.28
PSEN1-221ENST00000557293 IBTKQ9P2D0 1353 aaPredicted RBP16.77■□□□□ 0.28
PSEN1-221ENST00000557293 DLK2Q6UY11 383 aa16.77■□□□□ 0.28
PSEN1-221ENST00000557293 RRP7AQ9Y3A4 280 aaKnown RBP16.77■□□□□ 0.28
PSEN1-221ENST00000557293 ATP6V0A2Q9Y487 856 aa16.77■□□□□ 0.28
PSEN1-221ENST00000557293 SLC10A5Q5PT55 438 aa16.76■□□□□ 0.27
PSEN1-221ENST00000557293 SHTN1A0MZ66 631 aa16.75■□□□□ 0.27
PSEN1-221ENST00000557293 EIF4A1P60842 406 aaKnown RBP16.75■□□□□ 0.27
PSEN1-221ENST00000557293 GIGYF2Q6Y7W6 1299 aaKnown RBP16.75■□□□□ 0.27
PSEN1-221ENST00000557293 TRPM4Q8TD43 1214 aa16.75■□□□□ 0.27
PSEN1-221ENST00000557293 ZC3H15Q8WU90 426 aaKnown RBP16.75■□□□□ 0.27
PSEN1-221ENST00000557293 CFAP44Q96MT7 982 aa16.75■□□□□ 0.27
PSEN1-221ENST00000557293 ZBTB3Q9H5J0 574 aa16.75■□□□□ 0.27
PSEN1-221ENST00000557293 TNRC18O15417 2968 aaPredicted RBP16.74■□□□□ 0.27
PSEN1-221ENST00000557293 U2AF1L5P0DN76 240 aaPredicted RBP16.74■□□□□ 0.27
PSEN1-221ENST00000557293 U2AF1Q01081 240 aaKnown RBP eCLIP16.74■□□□□ 0.27
PSEN1-221ENST00000557293 MYL6BP14649 208 aa16.73■□□□□ 0.27
PSEN1-221ENST00000557293 CDC37L1Q7L3B6 337 aa16.73■□□□□ 0.27
PSEN1-221ENST00000557293 LRP10Q7Z4F1 713 aa16.73■□□□□ 0.27
PSEN1-221ENST00000557293 NUDCQ9Y266 331 aa16.73■□□□□ 0.27
PSEN1-221ENST00000557293 YDJCA8MPS7 323 aa16.72■□□□□ 0.27
PSEN1-221ENST00000557293 FAM155AB1AL88 458 aaPredicted RBP16.72■□□□□ 0.27
PSEN1-221ENST00000557293 RAD17O75943 681 aa16.72■□□□□ 0.27
PSEN1-221ENST00000557293 KIAA2012Q0VF49 1180 aa16.72■□□□□ 0.27
PSEN1-221ENST00000557293 NOGQ13253 232 aa16.72■□□□□ 0.27
PSEN1-221ENST00000557293 USP48Q86UV5 1035 aa16.72■□□□□ 0.27
PSEN1-221ENST00000557293 SP8Q8IXZ3 490 aa16.72■□□□□ 0.27
PSEN1-221ENST00000557293 CFAP53Q96M91 514 aa16.72■□□□□ 0.27
PSEN1-221ENST00000557293 NLRP3Q96P20 1036 aa16.72■□□□□ 0.27
PSEN1-221ENST00000557293 ZNF408Q9H9D4 720 aa16.72■□□□□ 0.27
PSEN1-221ENST00000557293 CNOT7Q9UIV1 285 aaKnown RBP16.72■□□□□ 0.27
PSEN1-221ENST00000557293 LAMB4A4D0S4 1761 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms